KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:35:02 2014 Check: 00 .. Name: ENSP00000390651/1-460 Len: 461 Check: 7415 Weight: 1.00 Name: ENSTTRP00000009657/1-460 Len: 461 Check: 3022 Weight: 1.00 Name: ENSBTAP00000028115/1-461 Len: 461 Check: 6713 Weight: 1.00 Name: bmy_18602T0/1-433 Len: 461 Check: 5803 Weight: 1.00 Name: BACU002223/1-362 Len: 461 Check: 5773 Weight: 1.00 // 1 50 ENSP00000390651/1-460 MNKPITPSTY VRCLNVGLIR KLSDFIDPQE GWKKLAVAIK KPSGDDRYNQ ENSTTRP00000009657/1-460 MNKPITASTY VRCLNLGLIR KLSDFIDPQE GWKKLAVAIK KPSGDDRYNQ ENSBTAP00000028115/1-461 MNKPITASTY VRCLSLGLIR KLSDFIDPQE GWKKLAVAIK KPSGDDRYNQ bmy_18602T0/1-433 MNKPITASTY VRCLNLGLIR KLSDFIDPQE GWKKLAVAIK KPSGDDRYNQ BACU002223/1-362 MNKPITASTY VRCLNLGLIR KLSDFIDPQE GWKKLAVAIK KPSGDDRYNQ 51 100 ENSP00000390651/1-460 FHIRRFEALL QTGKSPTSEL LFDWGTTNCT VGDLVDLLIQ NEFFAPASLL ENSTTRP00000009657/1-460 FHIRRFEALL QTGKSPTCEL LFDWGTTNCT VGDLVDLLVQ NEFFAPASLL ENSBTAP00000028115/1-461 FHIRRFEALL QIGKSPTCEL LFDWGTTNCT VGDLVDILVQ NEFFAPASLL bmy_18602T0/1-433 FHIRRFEALL QAGKSPTCEL LFDWGTTNCT VGDLVDLLVQ NEFFAPASLL BACU002223/1-362 FHIRRFEALL QTGKSPTCEL LFDWGTTNCT VGDLVDLLVQ NEFFAPASLL 101 150 ENSP00000390651/1-460 LPDAVPKTAN TLPSKEA-IT VQQKQMPFCD KDRTLMTPVQ NLEQSYMPPD ENSTTRP00000009657/1-460 LPDAVPKXXX XXXXXXX-XX XXXXXXXXYG KDRTPVISDE NTEQNYTPPD ENSBTAP00000028115/1-461 LPDAVPKNVN TLPSKVTVVA VQQKPKPLCG KDRTSVISDE NPEQNYVLPD bmy_18602T0/1-433 LPDAVPKTVN TLPSKVP-VT VQQKHMPLYG KDRTSVISDE NTEQNYMPPD BACU002223/1-362 LPDAVPKTVN TLPSKVP-VT VQQKHMPLYG KDRTSVISDE NTEQNYMPPD 151 200 ENSP00000390651/1-460 SSSPENKSLE VSDTRFHSFS FYELKNVTNN FDERPISVGG NKMGEGGFGV ENSTTRP00000009657/1-460 SSCPENRSLE VTDTRFHSFS YYELKDVTNN FDERPLSVGG NKMGEGGFGV ENSBTAP00000028115/1-461 SSSPENTSLE FSDTRFHSFS FFELKDVTNN FDERPISVGG NKMGEGGFGV bmy_18602T0/1-433 SSCPENRSLE VSDTRFHSFS FYELKDVTNN FDERPISVGG NKMGEGGFGV BACU002223/1-362 SSRPENRSLE VSDTRFHSFS FYELKDVTNN FDERPISVGG NKMGEGGFGV 201 250 ENSP00000390651/1-460 VYKGYVNNTT VAVKKLAAMV DITTEELKQQ FDQEIKVMAK CQHENLVELL ENSTTRP00000009657/1-460 VYKGYVNNRT VAVKKLAAMV DISTEELKQQ FDQEIKVMAK CQHENLVELL ENSBTAP00000028115/1-461 VYKGYVNNRT VAVKKLAAMV DISTEELKQQ FDQEIKVMAK CQHENLVELL bmy_18602T0/1-433 VYKGYVNNRT VAVKKLAAMV DISTEELKQQ FDQEIKVMAK CQHENLVELL BACU002223/1-362 VYKGYVNNRT VAVKKLAAMV DISTEELKQQ FDQEIKVMAK CQHENLVELL 251 300 ENSP00000390651/1-460 GFSSDGDDLC LVYVYMPNGS LLDRLSCLDG TPPLSWHMRC KIAQGAANGI ENSTTRP00000009657/1-460 GFSSDGDDLC LVYVYMPNGS LLDRLSCLDD TPPLSWCIRC KIAQGAANGL ENSBTAP00000028115/1-461 GFSSDGDDLC LVYVYMPNGS LLDRLSCLDG TPPLSWNMRC KIAQGAANGL bmy_18602T0/1-433 GFSSDGDDLC LVYVYMPNGS LLDRLSCLDD TPPLSWCIRC KIAQGAANGL BACU002223/1-362 GFSSDGDDLC LVYVYMPNGS LLDRLSCL-- ---------- ---------- 301 350 ENSP00000390651/1-460 NFLHENHHIH RDIKSANILL DEAFTAKISD FGLARASEKF AQTVMTSRIV ENSTTRP00000009657/1-460 SYLHENHHIH RDIKSANILL DEDFTAKISD FGLARASEKF AQTVLTSRIV ENSBTAP00000028115/1-461 SYLHENHHIH RDIKSANILL DEDFTAKISD FGLARASEKF AQTVMTSRIV bmy_18602T0/1-433 SYLHENHHIH RDIKSANILL DEDFTAKISD FGLARASEKF AQTVLTSRI- BACU002223/1-362 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000390651/1-460 GTTAYMAPEA LRGEITPKSD IYSFGVVLLE IITGLPAVDE HREPQLLLDI ENSTTRP00000009657/1-460 GTTAYMAPEA LRGEITAKSD IYSFGVVLLE IITGLPAVDE HREPQLLLDI ENSBTAP00000028115/1-461 GTTAYMAPEA LRGEITPKSD IYSFGVVLLE IITGLPAVDE HREPQLLLDI bmy_18602T0/1-433 ---------- ---------- ------VLLE IITGLPAVDE HREPQLLLDI BACU002223/1-362 ---------- ---------- ------VLLE IITGLPAVDE HREPQLLLDI 401 450 ENSP00000390651/1-460 KEEIEDEEKT IEDYIDKKMN DADSTSVEAM YSVASQCLHE KKNKRPDIKK ENSTTRP00000009657/1-460 KEEIEDEEKT IEDYIDTKMN DIDPTSIETM YSVASQCLHE KKNKRPDIKK ENSBTAP00000028115/1-461 KEEIEDEEKT IEDYVDRKMN DIDSTSIETM YSVASQCLHE KKNKRPDIKK bmy_18602T0/1-433 KEEIEDEEKT IEDYIDTKMN DIDSTSIETM YSVASQCLHE KKNKRPDIKK BACU002223/1-362 KEEIEDEEKT IEDYSDTKMN DIDSTSIETM YSVASQCLHE KKNKRPDIKK 451 500 ENSP00000390651/1-460 VQQLLQEMTA S ENSTTRP00000009657/1-460 VQQLLQEITA S ENSBTAP00000028115/1-461 VQQLLEEMTG S bmy_18602T0/1-433 VQQLLQEMTA S BACU002223/1-362 VQQLLQEMTA S