KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:35:05 2014 Check: 00 ..
Name: ENSTTRP00000008987/1-766 Len: 920 Check: 2019 Weight: 1.00
Name: ENSP00000264758/1-768 Len: 920 Check: 7228 Weight: 1.00
Name: ENSBTAP00000028152/1-738 Len: 920 Check: 2990 Weight: 1.00
Name: bmy_05454T0/1-846 Len: 920 Check: 9074 Weight: 1.00
Name: BACU004134/1-756 Len: 920 Check: 5149 Weight: 1.00
//
1 50
ENSTTRP00000008987/1-766 ---------- ---------- ---------- ---------- ---MNGDTRA
ENSP00000264758/1-768 ---------- ---------- ---------- ---------- ---MNGDSRA
ENSBTAP00000028152/1-738 ---------- ---------- ---------- ---------- ---MNGDTQA
bmy_05454T0/1-846 ---------- ---------- ---------- ---------- ---MNGDTRA
BACU004134/1-756 MAALLLAALQ FITLLLSTSC APDSSVRCLD DEGQKPGTWK DCAMNGDTQA
51 100
ENSTTRP00000008987/1-766 AVVTSPPPTT APHKERYFDR VDENNPEYLR ERNMAPDLRQ DFNMMEQKKR
ENSP00000264758/1-768 AVVTSPPPTT APHKERYFDR VDENNPEYLR ERNMAPDLRQ DFNMMEQKKR
ENSBTAP00000028152/1-738 AVVTSPPPTT APHKERYFDR VDENNPEYLR ERNMAPDLRQ DFNMMEQKKR
bmy_05454T0/1-846 AVVTSPPPTT APHKERYFDR VDENNPEYLR ERNMAPDLRQ DFNMMEQKKR
BACU004134/1-756 AVVTSPPPTT APHKERYFDR VDENNPEYLR ERNMAPDLRQ DFNMMEQKKR
101 150
ENSTTRP00000008987/1-766 VSMILQSPAF CEELESMIQE QFKKGKNPTG LLALQQIADF MTTNVPNVYP
ENSP00000264758/1-768 VSMILQSPAF CEELESMIQE QFKKGKNPTG LLALQQIADF MTTNVPNVYP
ENSBTAP00000028152/1-738 VSMILQSPAF CEELESMIQE QFKKGKNPTG LLALQQIADF MTTNVPNVYP
bmy_05454T0/1-846 VSMILQSPAF CEELESMIQE QFKKGKNPTG LLALQQIADF MTTNVPNVYP
BACU004134/1-756 VSMILQSPAF CEELESMIQE QFKKGKNPTG LLALQQIADF MTTNVPNVYP
151 200
ENSTTRP00000008987/1-766 AAPQGGMAAL NMSLGMVTPV NDLRGSDSIA YDKGEKLLRC KLAAFYRLAD
ENSP00000264758/1-768 AAPQGGMAAL NMSLGMVTPV NDLRGSDSIA YDKGEKLLRC KLAAFYRLAD
ENSBTAP00000028152/1-738 AAPQGGMAAL NMSLGMVTPV NDLRGSDSIA YDKGEKLLRC KLAAFYRLAD
bmy_05454T0/1-846 AAPQGGMAAL NMSLGMVTPV NDLRGSDSIA YDKGEKLLRC KLAAFYRLAD
BACU004134/1-756 AAPQGGMAAL NMSLGMVTPV NDLRGSDSIA YDKGEKLLRC KLAAFYRLAD
201 250
ENSTTRP00000008987/1-766 LFGWSQLIYN HITXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
ENSP00000264758/1-768 LFGWSQLIYN HITTRVNSEQ EHFLIVPFGL LYSEVTASSL VKINLQGDIV
ENSBTAP00000028152/1-738 LFGWSQLIYN HITTRVSSEQ EHFLIVPFGL LYSEVTASSL VKVNLQGDIV
bmy_05454T0/1-846 LFGWSQLIYN HITTRVSSEQ EHFLIVPFGL LYSEVTASSL VKVNLQGEAV
BACU004134/1-756 LFGWSQLIYN HITTRVSSEQ EHFLIVPFGL LYSEVTASSL VKVNLQGEAV
251 300
ENSTTRP00000008987/1-766 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX VSAMKXXXXX
ENSP00000264758/1-768 DRGSTNLGVN QAGFTLHSAI YAARPDVKCV VHIHTPAGAA VSAMKCGLLP
ENSBTAP00000028152/1-738 DRGSTNLGVN QAGFTLHSAI YAARPDVRCV VHIHTPAGAA VSAMKCGLLP
bmy_05454T0/1-846 DRGSTNLGVN QAGFTLHSAI YAARPDAKCV VH-------- VSAMKCGLLP
BACU004134/1-756 DRGSTNLGVN QAGFTLHSAI YAARPDAKCV VHVHTPAGAA VSAMKCGLLP
301 350
ENSTTRP00000008987/1-766 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
ENSP00000264758/1-768 ISPEALSLGE VAYHDYHGIL VDEEEKVLIQ KNLGPKSKVL ILRNHGLVSV
ENSBTAP00000028152/1-738 ISPEALSLGE VAYHDYHGIL VDEEEKILIQ KNLGPKSKVL ILRNHGLVSV
bmy_05454T0/1-846 ISPEALSLGE VAYHDYHGIL VDEEEKVLIQ KSLGPKSKVL ILRNHGLVSI
BACU004134/1-756 ISPEALSLGE VAYHDYHGIL VDEEEKVLIQ KNLGPKSKVL ILRNHGLVSV
351 400
ENSTTRP00000008987/1-766 XXXXXXXXXX XXXXXXXXXX XVRTLASAGG PDNLVLLDPG KYKAKSRSPG
ENSP00000264758/1-768 GESVEEAFYY IHNLVVACEI QVRTLASAGG PDNLVLLNPE KYKAKSRSPG
ENSBTAP00000028152/1-738 GESVEEAFYY IHNLVVACEI QVRTLASAGG PDNLVLLDPG KYKAKSRAPG
bmy_05454T0/1-846 GESVEEAFYY IHNLVVACEI QVRTLASAGG PDNLVLLDPG KYKAKSRSPG
BACU004134/1-756 GESVEEAFYY IHNLVVACEI QVRTLASAGG PDNLVLLDPG KYKAKSRSPG
401 450
ENSTTRP00000008987/1-766 SPAGEGSGSP PKWQIGEQEF EALMRMLDNL GYRTGYPYRY PALREKSKKY
ENSP00000264758/1-768 SPVGEGTGSP PKWQIGEQEF EALMRMLDNL GYRTGYPYRY PALREKSKKY
ENSBTAP00000028152/1-738 SPAGEGSGSP PKWQIGEQEF EALMRMLDNL GYRTGYPYRY PALREKSKKH
bmy_05454T0/1-846 SPAGEGSGSP PKWQLGEQEF EALMRMLDNL ---------- -----KSKKY
BACU004134/1-756 SPAGEGSGSP PKWQLGEQEF EALMRMLDNL GYRTGYPYRY PALREKSKKY
451 500
ENSTTRP00000008987/1-766 SDVEVPASVT GYPFASDGDS GTCSPLRHSF QKQQREKTRW LNSGRGDDAS
ENSP00000264758/1-768 SDVEVPASVT GYSFASDGDS GTCSPLRHSF QKQQREKTRW LNSGRGDEAS
ENSBTAP00000028152/1-738 SDVEAPASVT GYSLASDGDS GTCSPLRHSF QKQQREKTRW LNSGRGDDAS
bmy_05454T0/1-846 SDVEVPASVT GYPFASDGDS GTCSPLRHSF QKQQREKTRW LNSGRGDDAS
BACU004134/1-756 SDVEVPASVT GYPFASDGDS GTCSPLRHSF QKQQREKTRW LNSGRGDAAS
501 550
ENSTTRP00000008987/1-766 EEGQNGSSPK SKTKVWTNIT HDHVKPLLQS LSSGVCVPSC ITNCL-----
ENSP00000264758/1-768 EEGQNGSSPK SKTKVWTNIT HDHVKPLLQS LSSGVCVPSC ITNCL-----
ENSBTAP00000028152/1-738 EEGQNGSSPK AKTK------ ---------- ---------- ----------
bmy_05454T0/1-846 EEGQNGSSPK SKTKVWTNIT HDHVKPLLQS LSSGVCVPSC ITNCLLDDVE
BACU004134/1-756 EEGQNGSSPK SKTK------ ---------- ---------- ----------
551 600
ENSTTRP00000008987/1-766 ---------- ---------- ---------- ---------- ----------
ENSP00000264758/1-768 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000028152/1-738 ---------- ---------- ---------- ---------- ----------
bmy_05454T0/1-846 HVWQLGLRRL WEPGPSDPGL GEPSSPPSLF AVPKPPNALS QLLFAWTVAF
BACU004134/1-756 ---------- ---------- ---------- ---------- ----------
601 650
ENSTTRP00000008987/1-766 ---------- ---------- ---------- ---------- --XXXXXXXX
ENSP00000264758/1-768 ---------- ---------- ---------- ---------- --WTKEDGHR
ENSBTAP00000028152/1-738 ---------- ---------- ---------- ---------- --WTKEDGHR
bmy_05454T0/1-846 CNLFHLLKGV GLKTTSADHI HINTNSMRCF QKLQLFLSEE ISWTKEDGHR
BACU004134/1-756 ---------- ---------- ---------- ---------- --WTKEDGHR
651 700
ENSTTRP00000008987/1-766 XXXXXXXXXX XXXXXXXXXX XXXXXXIREQ NLQDIKTAGP QSQVLCGVVM
ENSP00000264758/1-768 TSTSAVPNLF VPLNTNPKEV QEMRNKIREQ NLQDIKTAGP QSQVLCGVVM
ENSBTAP00000028152/1-738 TSTSAVPNLF VPLNTNPKEV QEMRNKIREQ NLQDIKTAGP QSQVLSGVVM
bmy_05454T0/1-846 TPTSAVPNLF VPLNTNPKEV QEMRNKIREQ NLQDIKTAGP QSQVLCGVVM
BACU004134/1-756 TPTSAVPNLF VPLNTNPKEV QEMRNKIREQ NLQDIKTAGP QSQVLCGVVM
701 750
ENSTTRP00000008987/1-766 DRSLVQGELV TASKAIIEKE YQPHVIVSTT GPNPFSTLTD RELDDYRRAV
ENSP00000264758/1-768 DRSLVQGELV TASKAIIEKE YQPHVIVSTT GPNPFTTLTD RELEEYRREV
ENSBTAP00000028152/1-738 DRSLVQGELV TASKAIIEKE YQPHVIVSTT GPNPFTTLTD RELEEYRREV
bmy_05454T0/1-846 DRSLVQGELV TASKAIIEKE YQPHVIVSTA GPNPFNTLTD RELEDYRREV
BACU004134/1-756 DRSLVQGELV TASKAIIEKE YQPHVIVSTA GPNPFNTLTD RELEDYRREV
751 800
ENSTTRP00000008987/1-766 ERKHRGPEEN LDETREDKEE SPPEPPAAPH APPSAPIKLE EDLPQEPASG
ENSP00000264758/1-768 ERKQKGSEEN LDEAREQKEK SPPDQPAVPH PPPSTPIKLE EDLVPEPTTG
ENSBTAP00000028152/1-738 ARKQKGPEEN LDQAREEKEK SPPEP----H TPPSTPVKLE EDLPREPPSA
bmy_05454T0/1-846 ERKQKGPEEN LDETREDKEE SPPEPPAPHT PPPSAPIKLE EDLPQEPASG
BACU004134/1-756 ERKQKGPEEN LDEAREDKEE SPQQPPAAPH TPPSAPIKLE E---------
801 850
ENSTTRP00000008987/1-766 DNSDAATFTQ TLPDLSPEEP SEALCFPTL- -EEEE----- -EAGGPA---
ENSP00000264758/1-768 DDSDAATFKP TLPDLSPDEP SEALGFPML- -EKEE----- -EAHRPP---
ENSBTAP00000028152/1-738 DDSDAATFKP TLPDLSPDEP SEALGFPTLE KEEEEEEEGL GEAGGPPSPS
bmy_05454T0/1-846 DDSDAATFTP TLPDLSPDEP SEALCFPTL- -EEEEEEEGL CEAGGPP---
BACU004134/1-756 ---------- ---------- -EALCFPTLE EEEEEEEEGL CEAGGPP---
851 900
ENSTTRP00000008987/1-766 -GPTRSPSAA IPEPV--TAQ AADEAAAPAA EEGAAVDPGS DGSPGKSPSK
ENSP00000264758/1-768 -SPTEAPTEA SPEPAPDPAP VAEEAAPSAV EEGAAADPGS DGSPGKSPSK
ENSBTAP00000028152/1-738 GSPSRSPPVA SPEPA--PAQ VAEEAASPAA E-----DAGS DGSPGKSPSK
bmy_05454T0/1-846 -GPTRSPSAA IPEPV--TAQ VADEAASPAA EEGAAVDPGS DGSPGKSPSK
BACU004134/1-756 -GPTRSPSAA IPEPV--TAQ AADEAAAPAA EEGAAVDPGS DGSPGKSPSK
901 950
ENSTTRP00000008987/1-766 KKKKFRTPSF LKKSKKRSDS
ENSP00000264758/1-768 KKKKFRTPSF LKKSKKKSDS
ENSBTAP00000028152/1-738 KKKKFRTPSF LKKSKKRSDS
bmy_05454T0/1-846 KKKKFRTPSF LKKSKKRSDS
BACU004134/1-756 KKKKFRTPSF LKKSKKRSDS