KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:35:06 2014 Check: 00 .. Name: BACU007336/1-573 Len: 686 Check: 6986 Weight: 1.00 Name: bmy_17937T0/1-462 Len: 686 Check: 6526 Weight: 1.00 Name: ENSTTRP00000015828/1-453 Len: 686 Check: 6601 Weight: 1.00 Name: ENSP00000365439/1-464 Len: 686 Check: 8273 Weight: 1.00 Name: ENSBTAP00000028162/1-464 Len: 686 Check: 8426 Weight: 1.00 // 1 50 BACU007336/1-573 MVAKLSCEFE EIVPSPNPDS QTEVEEASLY THKDYNEVFT PVNGLEKCPL bmy_17937T0/1-462 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015828/1-453 ---------- ---------- ---------- ---------- ---------- ENSP00000365439/1-464 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028162/1-464 ---------- ---------- ---------- ---------- ---------- 51 100 BACU007336/1-573 LQAQKQDFYT DDEEIIFVND LMAYRSQLPT SQTLLSRLKL FLVKDPLLDF bmy_17937T0/1-462 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015828/1-453 ---------- ---------- ---------- ---------- ---------- ENSP00000365439/1-464 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028162/1-464 ---------- ---------- ---------- ---------- ---------- 101 150 BACU007336/1-573 KGQIFTEANF FRECFSFQGD MKGFVEDFYV DKENFRQEKL EDTPSILPEC bmy_17937T0/1-462 ------MANL VRRHF----- ---------- ---------- ----NNFIYF ENSTTRP00000015828/1-453 -----METEQ PEETF----- ---------- ---------- ---PNTETNG ENSP00000365439/1-464 -----METEQ PEETF----- ---------- ---------- ---PNTETNG ENSBTAP00000028162/1-464 -----METEQ PEETF----- ---------- ---------- ---PNTETNG 151 200 BACU007336/1-573 EFLISTSLKQ EVDIPSLSEL KESLNLMPEI INYVDENEKL FKRDLTIKHG bmy_17937T0/1-462 LF-------- ---------- ---------- ---------- ---------- ENSTTRP00000015828/1-453 EF-------- ---------- ---------- ---------- ---------- ENSP00000365439/1-464 EF-------- ---------- ---------- ---------- ---------- ENSBTAP00000028162/1-464 EF-------- ---------- ---------- ---------- ---------- 201 250 BACU007336/1-573 IHIEDIKCSS TEILAIQSQC EPEYKEPARG NLSQHRNQWR IGKRPAEDME bmy_17937T0/1-462 ---------- ---------- ---------- ---------- -CKRPAEDME ENSTTRP00000015828/1-453 ---------- ---------- ---------- ---------- -GKRPAEDME ENSP00000365439/1-464 ---------- ---------- ---------- ---------- -GKRPAEDME ENSBTAP00000028162/1-464 ---------- ---------- ---------- ---------- -GKRPAEDME 251 300 BACU007336/1-573 AEQAFKRSRN TDEMVELRIL LQSKNLGEVI GKGGKNIKAL CTDYNASVSV bmy_17937T0/1-462 EEQAFKRSRN TDEMVELRIL LQSKNAGAVI GKGGKNIKAL RTDYNASVSV ENSTTRP00000015828/1-453 EEQAFKRSRN TDEMVELRIL LQSKNAGAVI GKGGKNIKAL RTDYNASVSV ENSP00000365439/1-464 EEQAFKRSRN TDEMVELRIL LQSKNAGAVI GKGGKNIKAL RTDYNASVSV ENSBTAP00000028162/1-464 EEQAFKRSRN TDEMVELRIL LQSKNAGAVI GKGGKNIKAL RTDYNASVSV 301 350 BACU007336/1-573 PDSSGPERTL SISADIETIG EILKKIIPTL EEGLQLPSPT ATSQLPLESD bmy_17937T0/1-462 PDSSGPERIL SISADIETIG EILKKIIPTL EEGLQLPSPT ATSQLPLESD ENSTTRP00000015828/1-453 PDSSGPERIL SISADIETIG EILKKIIPTL EXGLQLPSPT ATSQLPLESD ENSP00000365439/1-464 PDSSGPERIL SISADIETIG EILKKIIPTL EEGLQLPSPT ATSQLPLESD ENSBTAP00000028162/1-464 PDSSGPERIL SISADIETIG EILKKIIPTL EEGLQLPSPT ATSQLPLESD 351 400 BACU007336/1-573 AVECLNYQHY KGSDFDCELR L--------- ---------- ---DPSESSW bmy_17937T0/1-462 AVECLNYQHY KGSDFDCELR LLIHQSLAGG IIGVKGAKIK ELRENTQTTI ENSTTRP00000015828/1-453 AVECLNYQHY KGSDFDCELR LLIHQSLAGG IIGVKGAKIK ELRENTQTTI ENSP00000365439/1-464 AVECLNYQHY KGSDFDCELR LLIHQSLAGG IIGVKGAKIK ELRENTQTTI ENSBTAP00000028162/1-464 AVECLNYQHY KGSDFDCELR LLIHQSLAGG IIGVKGAKIK ELRENTQTTI 401 450 BACU007336/1-573 RNY------W GQRVILIGGK PDRVVECIKI ILDLISESPI KGHDQPYDPN bmy_17937T0/1-462 KLFQECCPQS TDRVVLIGGK PDRVVECIKI ILDLISESPI KGRAQPYDPN ENSTTRP00000015828/1-453 KLFQECCPQS TDRVVLIGGK PDRVVECIKI ILDLISESPI KGRAQPYDPN ENSP00000365439/1-464 KLFQECCPHS TDRVVLIGGK PDRVVECIKI ILDLISESPI KGRAQPYDPN ENSBTAP00000028162/1-464 KLFQECCPQS TDRVVLIGGK PDRVVECIKI ILDLISESPI KGRAQPYDPN 451 500 BACU007336/1-573 FYDETYDYGG FTMMFDDRRG RPVGFPMWGR GGFDRMPPGR GGRPMPPSRR bmy_17937T0/1-462 FYDETYDYGG FTMMFDDRRG RPVGFPMRGR GGFDRMPPGR GGRPMPPSRR ENSTTRP00000015828/1-453 FYDETYDYGG FTMMFDDRRG RPVGFPMRGR GGFDRMPPGR GGRPMPPSRR ENSP00000365439/1-464 FYDETYDYGG FTMMFDDRRG RPVGFPMRGR GGFDRMPPGR GGRPMPPSRR ENSBTAP00000028162/1-464 FYDETYDYGG FTMMFDDRRG RPVGFPMRGR GGFDRMPPGR GGRPMPPSRR 501 550 BACU007336/1-573 DYDDMSPRRG PPPPPPGRGG RGGGRAQNLL LPPPPPPRGG DLMAYDRRGK bmy_17937T0/1-462 DYDDMSPRRG PPPPPPGRGG RGGSRARNLP LPPPPPPRGG DLMAYDRRGR ENSTTRP00000015828/1-453 DYDDMSPRRG PPPPPPGRGG RGGSRARNLP LPPPPPPRGG DLMAYDRRGR ENSP00000365439/1-464 DYDDMSPRRG PPPPPPGRGG RGGSRARNLP LPPPPPPRGG DLMAYDRRGR ENSBTAP00000028162/1-464 DYDDMSPRRG PPPPPPGRGG RGGSRARNLP LPPPPPPRGG DLMAYDRRGR 551 600 BACU007336/1-573 PGDRYDGMAG FSADETWDSA IDTWSPSEWQ MAYEPQGGSG YDYSYAEGRG bmy_17937T0/1-462 PGDRYDGMVG FSADETWDSA IDTWSPSEWQ MAYEPQGGSG YDYSYAGGRG ENSTTRP00000015828/1-453 PGDRYDGMVG FSADETWDSA IDTWSPSEWQ MAYEPQGGSG YDYSYAGGRG ENSP00000365439/1-464 PGDRYDGMVG FSADETWDSA IDTWSPSEWQ MAYEPQGGSG YDYSYAGGRG ENSBTAP00000028162/1-464 PGDRYDGMVG FSADETWDSA IDTWSPSEWQ MAYEPQGGSG YDYSYAGGRG 601 650 BACU007336/1-573 S--------- ---------- ---------- ---------- ---------- bmy_17937T0/1-462 SYGDLGGPII TTQVTIPKDL AGSIIGKGGQ RIKQIRHESG AXIKIDEPLE ENSTTRP00000015828/1-453 SYGDLGGPII TTQVTIPKDL AGSIIGKGGQ RIKQIRHESG ASIKIDEPLE ENSP00000365439/1-464 SYGDLGGPII TTQVTIPKDL AGSIIGKGGQ RIKQIRHESG ASIKIDEPLE ENSBTAP00000028162/1-464 SYGDLGGPII TTQVTIPKDL AGSIIGKGGQ RIKQIRHESG ASIKIDEPLE 651 700 BACU007336/1-573 ---------- ---------- ---------- ------ bmy_17937T0/1-462 GSEDRIITIT GTQDQIQNAQ YLLQNSVKQY ADVEGF ENSTTRP00000015828/1-453 GSEDRIITIT GTQDQIQNAQ YLLQN----- ------ ENSP00000365439/1-464 GSEDRIITIT GTQDQIQNAQ YLLQNSVKQY ADVEGF ENSBTAP00000028162/1-464 GSEDRIITIT GTQDQIQNAQ YLLQNSVKQY ADVEGF