KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:35:17 2014 Check: 00 .. Name: ENSP00000262424/1-497 Len: 501 Check: 4944 Weight: 1.00 Name: bmy_11353T0/1-412 Len: 501 Check: 3721 Weight: 1.00 Name: ENSBTAP00000028221/1-496 Len: 501 Check: 771 Weight: 1.00 Name: BACU004333/1-496 Len: 501 Check: 4815 Weight: 1.00 Name: ENSTTRP00000015189/1-497 Len: 501 Check: 2506 Weight: 1.00 // 1 50 ENSP00000262424/1-497 MSCVLGGVIP LGLLFLVCGS QGYLLPNVTL LEELLSKYQH NESHSRVRRA bmy_11353T0/1-412 MSCVLNXIVP LGLVLLVCGA QGFFLPNVTH LEKLLSKYQQ DRPHSRVRRA ENSBTAP00000028221/1-496 MSCVLTGVVP LGLVLLLCGA QGFFLPNVTQ LEKLLSKYQG DQPHSRTRRA BACU004333/1-496 MSCVLNGIVP LGLVLLVCGA QGFFLPNVTH LEKLLSKYQQ DRPHSRVRRA ENSTTRP00000015189/1-497 MSCVPNGLVP LGLVLLLCGA QGFFLPNVTH LEKLLSKYQQ DRPHSRVRRA 51 100 ENSP00000262424/1-497 IPREDKEEIL MLHNKLRGQV QPQASNMEYM TWDDELEKSA AAWASQCIWE bmy_11353T0/1-412 IPRVDKEEIL MLHNKLRGQV SPPASNMEYM TWDEELEKSA VAWAQECIWE ENSBTAP00000028221/1-496 ISRADREEIL TLHNKLRGQV SPPASNMEYM TWDEELEKSA VAWARECIWE BACU004333/1-496 IPRVDKEEIL MLHNKLRGQV SPPASNMEYM TWDEELERSA VAWAQECIWE ENSTTRP00000015189/1-497 IPRADKEEIL MLHNRLRGQV HHRASNMEYM TWDEELEKSA VAWAQECIWE 101 150 ENSP00000262424/1-497 HGPTSLLVSI GQNLGAHWGR YRSPGFHVQS WYDEVKDYTY PYPSECNPWC bmy_11353T0/1-412 HGPKSLLVSI GQNLAVHWGR YRSPGFHVQS WYDEVKDYTY PYPHECNPWC ENSBTAP00000028221/1-496 HGPTSLLVSI GQNLAVHWGR PRSPGSHVQS WYDEVKDYTY PYPHECNPWC BACU004333/1-496 HGPNSLLVSI GQNLAVHWGR YRSPGFHVQS WYDEVKDYTY PYPHECNPWC ENSTTRP00000015189/1-497 HGPNSLLVSI GQNLAVHWGR YRSPGFHVQS WYDEVKDYTY PYPHECNPWC 151 200 ENSP00000262424/1-497 PERCSGPMCT HYTQIVWATT NKIGCAVNTC RKMTVWGEVW ENAVYFVCNY bmy_11353T0/1-412 PERCSGTMCT HYTQHPHVIN ------VSLI PLL------- ---IHLRCSS ENSBTAP00000028221/1-496 PERCSGPMCT HYTQIVWATT NRIGCAVNTC PRMNVWGDVW ENAVYLVCNY BACU004333/1-496 PERCSGTMCT HYTQIVWATT TKIGCAVNTC QRMNVWGDVW ENAVYLVCNY ENSTTRP00000015189/1-497 PERCSGAMCT HYTQIVWATT TKIGCAVNTC ERMNVWGDVW ENAVYLVCNY 201 250 ENSP00000262424/1-497 SP----KGNW IGEAPYKNGR PCSECPPSYG GSCRNNLCYR EETYTPKPET bmy_11353T0/1-412 DKYVLILRDW LTQF------ --TAC----- ---------- -ETYDQKPET ENSBTAP00000028221/1-496 FP----KGNW IGEAPYKTGQ PCSECPGKYR GGCKNNLCYQ -ETYGQETET BACU004333/1-496 SP----KGNW IGEAPYRTGR PCSECPPRYG GSCRNNLCYR -ETYDQKPET ENSTTRP00000015189/1-497 SP----KGNW IGEAPYRAGR PCSECPPRYG GSCRNNLCYR EETYDQKPET 251 300 ENSP00000262424/1-497 DEMNEVETAP IPEENHVWLQ PRVMRPTKPK KTSAVNYMTQ VVRCDTKMKD bmy_11353T0/1-412 DEMNEVEMAP IPEEKHIWVH SRVIRPTKPK KAPAVNYMTQ VIGCDTKMKD ENSBTAP00000028221/1-496 DDMNEVEAAP IPDEKHVWVT PRVIKPKKPK KDSPVNYMTQ VVKCDTKMKD BACU004333/1-496 DEMNEVEMAP IPEEKHIWVH SRVIRPTKPE KAPAVNYMTQ VIGCDTKMKD ENSTTRP00000015189/1-497 DEMNEVEVAP IPEEKHIWVP PRVIRPTKPK KAPAVNHMTQ VVKCDTKMKD 301 350 ENSP00000262424/1-497 RCKGSTCNRY QCPAGCLNHK AKIFGTLFYE SSSSICRAAI HYGILDDKGG bmy_11353T0/1-412 KCKGSTCNRY QCPAGCLHNR AKIFGTLFYE SVSSICRAAI HYGVLDDKGG ENSBTAP00000028221/1-496 KCKGSTCNRY QCPAGCLHSG AKIFGTLFYE SASSICRAAI HYGILDDRGG BACU004333/1-496 KCKGSTCNRY QCPGGCLHNR AKIFGTLFYE SVSSICRAAI HYGVLDDKGG ENSTTRP00000015189/1-497 KCKGSTCNRY QCPAGCLHHR AKIFGTLFYE SASSICRAAI HYGVLDDKGG 351 400 ENSP00000262424/1-497 LVDITRNGKV PFFVKSERHG VQSLSKYKPS SSFMVSKVKV QDLDCYTTVA bmy_11353T0/1-412 LVDVTRNGKV PFFV------ ----NKYKSS SSFTVSKVKE QDLDCYTTVA ENSBTAP00000028221/1-496 LVDVTRNGKV PFFVKSERNG VQSLSKYKAS SSFTVSKVKV QDLDCYTTVA BACU004333/1-496 LVDVTRNGKV PFFVKSERNG VQSLSKYKSS SSFTVSKVKE QDLDCYTTVA ENSTTRP00000015189/1-497 LVDVTRNGKV PFFVKSERNG VQSLSKYKAS SSFTVSKVKV QDLDCYTTVA 401 450 ENSP00000262424/1-497 QLCPFEKPAT HCPRIHCPAH CKDEPSYWAP VFGTNIYADT SSICKTAVHA bmy_11353T0/1-412 QLCPYERPGT HCPRVHCPAH CKDEPSYWAP VLGTNIYADV SILAFSAA-- ENSBTAP00000028221/1-496 QLCPYEKPGT HCPRVRCPAH CKDEPSYWAP VFGSNIYADT SSICKTAVHA BACU004333/1-496 QLCPYERPGT HCPRVHCPAH CKDEPSYWAP VLGTNIYADS SSICRTAVHA ENSTTRP00000015189/1-497 QLCPYEKLGT HCPRVHCPAH CKDEPSYWAP VLGTNIYADT SSICKTAVHA 451 500 ENSP00000262424/1-497 GVISNESGGD VDVMPVDKKK TYVGSLRNGV QSESLGTPRD GKAFRIFAVR bmy_11353T0/1-412 ---------- ---------- ---------- ------TPQK PHS-KVWTPE ENSBTAP00000028221/1-496 GVIRNESGGY VDVMPVDKKK TYVASLRNGV QSESLRTPRD GKAFRIFAVR BACU004333/1-496 GVIRNKSGGY VDVMPVDKKE IYVGSLRNGV QSESLRTPRD GKAFRIFAVR ENSTTRP00000015189/1-497 GVIRNKSGGY VDVMPVDKKK IYVGSLRNGV QSESLRTPRD GKAFRIFAVR 501 550 ENSP00000262424/1-497 Q bmy_11353T0/1-412 T ENSBTAP00000028221/1-496 Q BACU004333/1-496 Q ENSTTRP00000015189/1-497 P