KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:35:21 2014 Check: 00 .. Name: ENSP00000276211/1-547 Len: 1104 Check: 3332 Weight: 1.00 Name: ENSBTAP00000028237/1-530 Len: 1104 Check: 4103 Weight: 1.00 Name: bmy_04223T0/1-663 Len: 1104 Check: 9694 Weight: 1.00 Name: BACU009599/1-1085 Len: 1104 Check: 8698 Weight: 1.00 Name: ENSTTRP00000012544/1-547 Len: 1104 Check: 4988 Weight: 1.00 // 1 50 ENSP00000276211/1-547 MGGCIPFLKA ARALCPRIMP PLLLLSAFIF LVSVLGGAPG HNPDRRTKMV ENSBTAP00000028237/1-530 ---------- --------MP PLLLLSALIF LVNVLGGAPG HNPNRRAKMI bmy_04223T0/1-663 MGGCIPSLKA ARTLCPRIMP PLLLLSAFIF LVNVLGGAPG HNPDRRTKMI BACU009599/1-1085 ---------- --------MP PLLLLFAFIF LVNVLGGAPG HNPDRRTKMI ENSTTRP00000012544/1-547 MGGCIPFLKA ERTLCPRIMP PLLLLSAFIF LVNVLGGAPG HNPDRRTKMI 51 100 ENSP00000276211/1-547 SIHSLSELER LKLQETAYHE LVARHFLSEF KPDRALPIDR PNTLDKWFLI ENSBTAP00000028237/1-530 SIHSLSELER LKLQEAAYHE LVARQFLSEF KPERALPTDR SNTFEKWFLI bmy_04223T0/1-663 SIHSLSELER LKLQETAYHE LVARHFLSEF KPERALPIDR PNTLEKWFLI BACU009599/1-1085 SIHSLSELER LKLQETAYHE LVARHFLSEF KPERALPIDR PSTLEKWFLI ENSTTRP00000012544/1-547 SIHSLSELER LKLQETAYHE LVARHFLSEF KPERALPIDR PNTLEKWFLI 101 150 ENSP00000276211/1-547 LRGQQRAVSH KTFGISLEEV LVNEFTRRKH LELTATMQVE EATGQA-AGR ENSBTAP00000028237/1-530 LRGQERAVSL KTFGIRLEEV LVNELTRRKQ VELRATMQMQ EAAGPATSGR bmy_04223T0/1-663 LRGQERAVSL KTFGIRLEEV LVNELTRRKQ LELRAAMQIE EATGQI-AGR BACU009599/1-1085 LRGQERAVSL KTFGIRLEEV LVNELTRRKQ LELRGAMQIE EATGQV-AGR ENSTTRP00000012544/1-547 LRGQERAVSL KTFGIRLEEV LVNELTRRKQ LELRATMQIE EATRQA-AGR 151 200 ENSP00000276211/1-547 RRGNVVRRVF GRIRRFFSRR RNEPTLPREF TRRGRRGAVS VDSLAELEDG ENSBTAP00000028237/1-530 RRGNAVQRMF GRIRRIFSGR RDEPFLPREF TRRGRRGAVS ADSLAELEGG bmy_04223T0/1-663 RRGNVVQRMF GRIRRFFSRR RDEPSLPREF TRRGRRGAVS VDSLAELEDG BACU009599/1-1085 RRGNVVQRMF GRIRRFFSRR RDEPSLPREF TRRGRRGAVS VDSLAELEDG ENSTTRP00000012544/1-547 RRGNVVQRMF GRIRRFSRMX XXXXXXXXXX XXXXXXGAVS VDSLAELEDG 201 250 ENSP00000276211/1-547 ALLLQTLQLS KISFPIGQRL LGSKRKMSLN PIAKQIPQVV EACCQFIEKH ENSBTAP00000028237/1-530 ALLLQTLQLS RISFPIGQRL LGSKRKMSLN PIAKQIPHVV EACCSFIEKH bmy_04223T0/1-663 ALLLQTLQLS KTSFPIGQRL LGSKRKMSLN PIAKQIPQVV EACCSFIEKH BACU009599/1-1085 ALLLQTLQLS RTSFPIGQRL LGSKRKMSLN PIAKQIPQVV EACCSFIEKH ENSTTRP00000012544/1-547 ALLLQTLQLS KTSFPIGQRL LGSKRKMSLN PIAKQIPQVV EACCSFIEKH 251 300 ENSP00000276211/1-547 GLSAVGIFTL EYSVQRVRQL REEFDQGLDV VLDDNQNVHD VAALLKEFFR ENSBTAP00000028237/1-530 GLSTVGIFTL EYSEKRVRKL REEFDQGLDV VLDDSQNVHD VAALLKEFFR bmy_04223T0/1-663 GLSTVGIFTL EYSEQRVRKL REEFDRGLDV VLDDSQNVHD VAALLKEFFR BACU009599/1-1085 GLSTVGIFTL EYSEQRVRKL REEFDQGLDV VLDDSQNVHD VAALLKEFFR ENSTTRP00000012544/1-547 GLSTVGIFTL EYSEQRVRKL REEFDQGLDV VLDDSQNVHD VAALLKEFFR 301 350 ENSP00000276211/1-547 DMKDSLLPDD LYMSFLLTAT LKPQDQLSAL QLLVYLMPPC HSDTLERLLK ENSBTAP00000028237/1-530 DMKDSLLPDD LYMSFLQTAT LKPQDQLSAL QLLVYLMPPC HSDTLERLLK bmy_04223T0/1-663 DMKDSLLPDD LYMSFLLTAT LKPQDQLSAL QLLVYLMPPC HSDTLERLLK BACU009599/1-1085 DMKDSLLPDD LYMSFLLTAT LKPQDQLSAL QLLVYLMPPC HSDTLERLLK ENSTTRP00000012544/1-547 DMKDSLLPDD LYMSFLLTAT LKPQDQLSAL QLLVYLMPPC HSDTLERLLK 351 400 ENSP00000276211/1-547 ALHKITENCE DSIGIDGQLV PGNRMTSTNL ALVFGSALLK KGKFGKRESR ENSBTAP00000028237/1-530 VLHKVAENCE DSIGIDGQLV SGNRMTSTNL ALVFGSALLK KGASAKRESR bmy_04223T0/1-663 VLHKITENCE DSIGIDGQLV SGNRMTSTNL ALVFGSALLK RGTSAKRESR BACU009599/1-1085 VLHKITENCE DSIGIDGQLV SGNRMTSTNL ALVFGSAILK RGTSAKRESR ENSTTRP00000012544/1-547 VLHKITENCE DSIGIDGQLV SGNRMTSTNL ALVFGSALLK RGTSAKRESR 401 450 ENSP00000276211/1-547 KTKLGIDHYV ASVNVVRAMI DNWDVLFQVP PHIQRQVAKR VWKSSPEALD ENSBTAP00000028237/1-530 KTRLGIDHYV ASVSVVRAMI DNWDVLFQVP PHIQKQVAKR VWKSSPEALD bmy_04223T0/1-663 KTRLGIDHYV ASVNVVRAMI DNWDILFQVP PHIQRQVAKR VWKSSPEALD BACU009599/1-1085 KTRLGIDHYV ASVNVVRAMI DNWDILFQVP PHIQRQVAKR VWKSSPEALD ENSTTRP00000012544/1-547 KTKLGIDHYV ASVSVVRAMI DNWDILFQVP PHIQRQVAKR VWKSSPEALD 451 500 ENSP00000276211/1-547 FIRRRNLRKI QSARIKMEED ALLSDPVETS AEARAAVLAQ SKPSDEG--- ENSBTAP00000028237/1-530 FIRRRNLRKI QSERIKMEED ALLSDPVETS AEARAAILGQ SKPFDEG--- bmy_04223T0/1-663 FIRRRNLRKI QSARIKMEED ALLSDPVENS AEARAAVLGQ SKPFDEGQFP BACU009599/1-1085 FIRRRNLRKI QSARIKMEED ALLSDPVENS AEARAAVLGQ SKPFDEGQFP ENSTTRP00000012544/1-547 FIRRRNLRKI QSARIKMEED ALLSDPVENS AEARAAVLGQ SKPFDEG--- 501 550 ENSP00000276211/1-547 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028237/1-530 ---------- ---------- ---------- ---------- ---------- bmy_04223T0/1-663 AGGQTPGEGQ SLGE------ ---------- ---------- ---------- BACU009599/1-1085 AGRLTPGEGQ SLGEGQALPE GQVLAEDEPL EEDEPSEEDV PVNEELLFEY ENSTTRP00000012544/1-547 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000276211/1-547 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028237/1-530 ---------- ---------- ---------- ---------- ---------- bmy_04223T0/1-663 ---------- ---------- ---------- ---------- ---------- BACU009599/1-1085 LNQGVVFGEV QGLEIPNDLE IQGPHLEGIP EPDEDDDDDD NDDDDDTLNF ENSTTRP00000012544/1-547 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000276211/1-547 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028237/1-530 ---------- ---------- ---------- ---------- ---------- bmy_04223T0/1-663 ---------- -------ELI EIQDFEEILY FDMVPDPEVA QDVQEIPNPG BACU009599/1-1085 DDLPPLEDIL DPDDEILELI EIQDVEEILY FDMVPDPEVA QDVQEIPNPG ENSTTRP00000012544/1-547 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000276211/1-547 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028237/1-530 ---------- ---------- ---------- ---------- ---------- bmy_04223T0/1-663 ENPNHDLEEG PDFEDYQNLD LAEVPYLDVI PNNEEASDTD EVPDNEEAPD BACU009599/1-1085 ENPNHDLEEG PDFEDYQNLD LAEVPYLDVT PNNEEASDTD EIPDNEEAPD ENSTTRP00000012544/1-547 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000276211/1-547 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028237/1-530 ---------- ---------- ---------- ---------- ---------- bmy_04223T0/1-663 TDGVPGHADD SDNDENPDSE EDPNLEE--- ---------- ---------- BACU009599/1-1085 TDGVPGHADD SDNDENPDSE EDPNLEEVPA LDEIPNDEAS NAEEVPDHEE ENSTTRP00000012544/1-547 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000276211/1-547 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028237/1-530 ---------- ---------- ---------- ---------- ---------- bmy_04223T0/1-663 ---------- ---------- ---------- ---------- ---------- BACU009599/1-1085 VNGISDSDED LDFDEVPALH VVPSPEEAPG GHEIPNQEES PEVNGLSDSE ENSTTRP00000012544/1-547 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000276211/1-547 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028237/1-530 ---------- ---------- ---------- ---------- ---------- bmy_04223T0/1-663 ---------- ---------- ---------- ---------- ---------- BACU009599/1-1085 EDPSLEEVPA LDGVPNDEET SDTEEIPDYE ETPEVNGIAG SEEDSNPEEV ENSTTRP00000012544/1-547 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000276211/1-547 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028237/1-530 ---------- ---------- ---------- ---------- ---------- bmy_04223T0/1-663 ---------- ---------- ---------- ---------- ---------- BACU009599/1-1085 PALHVVTSPE DVSDFDEIQN QEEYSDVSGV PNNEEASDVE EIPGHKEDSD ENSTTRP00000012544/1-547 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000276211/1-547 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028237/1-530 ---------- ---------- ---------- ---------- ---------- bmy_04223T0/1-663 ---------- ---------- ---------- ---------- ---------- BACU009599/1-1085 VSGIQDSEEN PNLEEDTVLS VVPEPEGTQI HNKVPDSQKD LANTSEEDEI ENSTTRP00000012544/1-547 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSP00000276211/1-547 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028237/1-530 ---------- ---------- ---------- ---------- ---------- bmy_04223T0/1-663 ---------- ---------- ---------- ---------- ---------- BACU009599/1-1085 TNMAPEPEDV SILNTIPDPQ PDLAVNLEKI MKVEAVPMPS NLDSKEVQSP ENSTTRP00000012544/1-547 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSP00000276211/1-547 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028237/1-530 ---------- ---------- ---------- ---------- ---------- bmy_04223T0/1-663 ---------- ---------- ---------- ---------- ---------- BACU009599/1-1085 RTIQFHKEDA AVTFLVDIVF LISKSQPGPV MDYRSFSESL KTDTCFLPSM ENSTTRP00000012544/1-547 ---------- ---------- ---------- ---------- ---------- 1051 1100 ENSP00000276211/1-547 ---SSEEPAV PSGTARSHDD EEGAGNPPIP EQDRPLLRVP REKEAKTGVS ENSBTAP00000028237/1-530 ---SSEEPAV PPGTARSHDD EEGAGNPLIL EQDRPLLRVP REKEAKTGIG bmy_04223T0/1-663 --TAGNHILL SAKQLVSWEA LAGA------ EGEREVGKRN EIEEGDVE-- BACU009599/1-1085 KFCSSEEPAV PPGTARSHDD DEGAGKPPIL EQDRPLLRVP REKEAKTGVG ENSTTRP00000012544/1-547 ---SSEEPAV PPGTARSHDD DEGAGNPPIL EQDRPLLRVP REKEAKTGIG 1101 1150 ENSP00000276211/1-547 YFFP ENSBTAP00000028237/1-530 YFFP bmy_04223T0/1-663 ---- BACU009599/1-1085 YFFP ENSTTRP00000012544/1-547 YFFP