KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:35:22 2014 Check: 00 .. Name: ENSTTRP00000009966/1-291 Len: 489 Check: 6671 Weight: 1.00 Name: bmy_09530T0/1-224 Len: 489 Check: 7095 Weight: 1.00 Name: ENSP00000367086/1-380 Len: 489 Check: 6271 Weight: 1.00 Name: ENSBTAP00000028254/1-374 Len: 489 Check: 243 Weight: 1.00 Name: BACU001117/1-453 Len: 489 Check: 2617 Weight: 1.00 // 1 50 ENSTTRP00000009966/1-291 ---------- ---------- ---------- ---------- ---------- bmy_09530T0/1-224 ---------I GPFG------ ------GPSA PPQGCCCSRV TSFPRLTLLL ENSP00000367086/1-380 MKLLARALRL CEFGRQASSR RLVAGQGCVG PRRGCCAPVQ VVGPRADL-- ENSBTAP00000028254/1-374 MAPPLPSPSM APPGLIHSAP GLLDTCALPQ PP----AAAT MSGPAAETPS BACU001117/1-453 ---------- ---------- ----MASVWA PSRSPWVLVE VKLKDMSHT- 51 100 ENSTTRP00000009966/1-291 ---------- ---------- ---------- ---------- ---RHCNSQN bmy_09530T0/1-224 PPPPS----- -RIMRPDDAN VAGNVHGGTI LKMIEEAGAI ISTRHCNSQN ENSP00000367086/1-380 --PPCGACIT GRIMRPDDAN VAGNVHGGTI LKMIEEAGAI ISTRHCNSQN ENSBTAP00000028254/1-374 AIQIC----- -RIMRPDDAN VAGNVHGGTV LKMIEEAGAI ISTRHCNSQN BACU001117/1-453 ---------- -RIMRPDDAN VAGNVHGGTI LKMIEEAGAI ISTRHCNSQN 101 150 ENSTTRP00000009966/1-291 GXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_09530T0/1-224 GECCVAALAQ VERTDFLSPM CIGEVAHVSA EITYTSKHSV EVQVHVMSEN ENSP00000367086/1-380 GERCVAALAR VERTDFLSPM CIGEVAHVSA EITYTSKHSV EVQVNVMSEN ENSBTAP00000028254/1-374 GERCVAALAR VERTDFLSPM CIGEVAHVSA EITYTSKHSV EVQVHVMSEN BACU001117/1-453 GECCVAALAQ VERTDFLSPM CVGEVAHVSA EITYTSKHSV EVQVHVMSEN 151 200 ENSTTRP00000009966/1-291 XXXXTKKLTN KATLWYVPLS LKNVDKVLEV PPVVYSRQGQ EEEGRKRYEA bmy_09530T0/1-224 ILTGTKKLTN KATLWYVPLS LKNVDKVLEV PPVVYSRQEQ EEEGRKRYEA ENSP00000367086/1-380 ILTGAKKLTN KATLWYVPLS LKNVDKVLEV PPVVYSRQEQ EEEGRKRYEA ENSBTAP00000028254/1-374 ILTGTKKLTN KATLWYVPLS LKNVDKVLEV PPVVYSRQEQ EEEGRKRYEA BACU001117/1-453 ILTGTKKLTN KATLWYVPLS LKNVDKVLEV PPVVYSRQEQ EEEGRKRYEA 201 250 ENSTTRP00000009966/1-291 QKLERMETTW RNGDIIQPVL NPEPNTVSYS QSSLIHLVGP SDCTLHGFVH bmy_09530T0/1-224 RKLERMETTW RNGDIVQPVL NPEPNTVSYS QSSLIHLVGP SDCTLHGFVH ENSP00000367086/1-380 QKLERMETKW RNGDIVQPVL NPEPNTVSYS QSSLIHLVGP SDCTLHGFVH ENSBTAP00000028254/1-374 QKLERMETKW RNGDIIQPVL NPEPNTVSYS QSSLIHLVGP SDCTLHGFVH BACU001117/1-453 QKLERMETTW RNGDIVQPVL NPEPNTVSYS QSSLIHLVGP SDCTLHGFVH 251 300 ENSTTRP00000009966/1-291 GGVTMKLMDE VAGIVAARHC KTNIVTASVD AINFYDKIRK ---------- bmy_09530T0/1-224 G--------- ---------- ---------- ---------- ---------- ENSP00000367086/1-380 GGVTMKLMDE VAGIVAARHC KTNIVTASVD AINFHDKIRK ---------- ENSBTAP00000028254/1-374 GGVTMKLMDE VAGIVAARHC KTNIVTASVD AINFHDKIRK ---------- BACU001117/1-453 GGVTMKLMDE VAGIVAARHC KTNIVTASVD AINFYDKIRK GHRSQRLESA 301 350 ENSTTRP00000009966/1-291 ---------- ---------- ---------- ---------- ---------- bmy_09530T0/1-224 ---------- ---------- ---------- ---------- ---------- ENSP00000367086/1-380 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028254/1-374 ---------- ---------- ---------- ---------- ---------- BACU001117/1-453 FGDASVKLRF AGLTFQSGKF CNSDVIGAFV LLXAAYKLVL LNCSRHGALR 351 400 ENSTTRP00000009966/1-291 ---------- ---------- ---------- ---------- -----GCVIT bmy_09530T0/1-224 ---------- ---------- ---------- ---------- ---------- ENSP00000367086/1-380 ---------- ---------- ---------- ---------- -----GCVIT ENSBTAP00000028254/1-374 ---------- ---------- ---------- ---------- -----GCVIT BACU001117/1-453 RPYAHGCCDH CHQIPWRHVT SLEGAQVTRA ICLQEPVNAN AASHSGCVIT 401 450 ENSTTRP00000009966/1-291 ISGRVTFTSN KSMEIEVLVD SDPVVDNSQK RYRAASAFFT YVSLSQEGKS bmy_09530T0/1-224 ---------- ---------- ---------- ---------- ---------- ENSP00000367086/1-380 ISGRMTFTSN KSMEIEVLVD ADPVVDSSQK RYRAASAFFT YVSLSQEGRS ENSBTAP00000028254/1-374 ISGRMTFTSN KSMEIEVLVD ADPVVNNFVK RYRAASAFFT YVSLSPEGKS BACU001117/1-453 ISGRVTFTSN KSMEIEVLVD SDPVVDNSQK RYRAASAFFT YVSLSQEGKS 451 500 ENSTTRP00000009966/1-291 LPVPQLVPET EDEKKRFEEG KGRYLQMKAK RQGQAEPQP bmy_09530T0/1-224 ---------- ---------- ---------- --------- ENSP00000367086/1-380 LPVPQLVPET EDEKKRFEEG KGRYLQMKAK RQGHAEPQP ENSBTAP00000028254/1-374 LPVPQLVPET EDEKKRFEEG KGRYLQMKAK RQGQAETQA BACU001117/1-453 LPVPQLVPET EDEKKRFEEG KGRYLQMKAK RQGQAEPQP