KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:35:23 2014 Check: 00 .. Name: ENSTTRP00000015077/1-345 Len: 351 Check: 2700 Weight: 1.00 Name: ENSP00000251810/1-351 Len: 351 Check: 5611 Weight: 1.00 Name: ENSBTAP00000028260/1-351 Len: 351 Check: 6101 Weight: 1.00 Name: bmy_00474T0/1-185 Len: 351 Check: 6162 Weight: 1.00 Name: BACU004821/1-321 Len: 351 Check: 7567 Weight: 1.00 // 1 50 ENSTTRP00000015077/1-345 MGDAERPEAS RPQQEEKLSS DTNENEAKSN EEPLLRKSSR RFVIFPIQYP ENSP00000251810/1-351 MGDPERPEAA GLDQDERSSS DTNESEIKSN EEPLLRKSSR RFVIFPIQYP ENSBTAP00000028260/1-351 MGDPERPEAA RPQPEERLSS DTNENEAKSD EEPLLRKSSR RFVIFPIQYP bmy_00474T0/1-185 MGDPERPEAA RPEQEERLSS DTNENEAKSN EEPLLRRSSR RFVIFPIQYP BACU004821/1-321 ---------- ---------- ---------- EEPLLRRSSR RFVIFPIQYP 51 100 ENSTTRP00000015077/1-345 DIWKMYKQAQ ASFWTAEEVD LSKDLPHWNK LKSEEKYFIS HILAFFAASD ENSP00000251810/1-351 DIWKMYKQAQ ASFWTAEEVD LSKDLPHWNK LKADEKYFIS HILAFFAASD ENSBTAP00000028260/1-351 DIWKMYKKAQ ASFWTAEEVD LSKDLPHWNK LKSEEKYFIS HILAFFAASD bmy_00474T0/1-185 DIWKMYKQAQ ASFWTAEEVD LSKDLPHWNK LKSEEKYFIS HILAFFAASD BACU004821/1-321 DIWKMYKQAQ ASFWTAEEVD LSKDLPHWNK LKSEEKYFIS HILAFFAASD 101 150 ENSTTRP00000015077/1-345 GIVNENL-ER FSQEVQVPEA RCFYGFQILI ENVHSEMYSL LIDTYIRDPK ENSP00000251810/1-351 GIVNENLVER FSQEVQVPEA RCFYGFQILI ENVHSEMYSL LIDTYIRDPK ENSBTAP00000028260/1-351 GIVNENLVER FSQEVQVPEA RCFYGFQILI ENVHSEMYSL LIDTYIRDPK bmy_00474T0/1-185 GIVNENLVER FSQEVQVPEA RCFYGFQILI ENVHSEMYSL LIDTYIRDPK BACU004821/1-321 GIVNENLVER FSQEVQVPEA RCFYGFQILI ENVHSEMYSL LIDTYIRDPK 151 200 ENSTTRP00000015077/1-345 KREFLFNAIE TMPYVKKKAD WALRWIADRK STFGERVVAF AAVEGIFFSG ENSP00000251810/1-351 KREFLFNAIE TMPYVKKKAD WALRWIADRK STFGERVVAF AAVEGVFFSG ENSBTAP00000028260/1-351 KREFLFNAIE TMPYVKKKAD WALRWIADRK STFGERVVAF AAVEGIFFSG bmy_00474T0/1-185 KREFLFNAIE TMPYVKKKAD WALRWIADRK STFGM----- ---------- BACU004821/1-321 KREFLFNAIE TMPYVKKKAD WALRWIADRK STFGERVVAF AAVEGIFFSG 201 250 ENSTTRP00000015077/1-345 SFAAIFWLKK RGLMPGLTFS NELISRDEGL HCDFACLMFQ YLVNKPSEER ENSP00000251810/1-351 SFAAIFWLKK RGLMPGLTFS NELISRDEGL HCDFACLMFQ YLVNKPSEER ENSBTAP00000028260/1-351 SFAAIFWLKK RGLMPGLTFS NELISRDEGL HCDFACLMFQ YLVNKPSEER bmy_00474T0/1-185 ---------- ---------- ---------- ---------- ---------- BACU004821/1-321 SFAAIFWLKK RGLMPGLTFS NELISRDEGL HCDFACLMFQ YLVNKPSEER 251 300 ENSTTRP00000015077/1-345 VREIIVNAVE IEQEFLTEAL PVGLIGMNCV LMKQYIEFVA DRLLSELGFS ENSP00000251810/1-351 VREIIVDAVK IEQEFLTEAL PVGLIGMNCI LMKQYIEFVA DRLLVELGFS ENSBTAP00000028260/1-351 VREIIVNAVE IEQEFLTEAL PVGLIGMNCV LMKQYIEFVA DRLLTELGFS bmy_00474T0/1-185 ---------- ---------- ---------- ---------- ---------- BACU004821/1-321 VREIIVNAVE IEQEFLTEAL PVGLIGMNCV LMKQYIEFVA DRLLSELGFS 301 350 ENSTTRP00000015077/1-345 KVFQTKNPFD FMGEISLRGD KIFFEKRV-K YQRFAM---- AEDVFTLYAD ENSP00000251810/1-351 KVFQAENPFD FMENISLEGK TNFFEKRVSE YQRFAVMAET TDNVFTLDAD ENSBTAP00000028260/1-351 KVFQAENPFD FMENISLEGK TNFFEKRVSE YQRFAVMAET TDNVFTLDAD bmy_00474T0/1-185 ---------- ---------- ---------- ---------- ---------- BACU004821/1-321 KVFQAENPFD FMENISLEGK TNFFEKRVSE YQRFAVMAET TDNVFTLDAD 351 400 ENSTTRP00000015077/1-345 F ENSP00000251810/1-351 F ENSBTAP00000028260/1-351 F bmy_00474T0/1-185 - BACU004821/1-321 F