KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:35:27 2014 Check: 00 .. Name: ENSTTRP00000012225/1-683 Len: 726 Check: 2022 Weight: 1.00 Name: bmy_19096T0/1-688 Len: 726 Check: 5288 Weight: 1.00 Name: ENSP00000344866/1-691 Len: 726 Check: 5175 Weight: 1.00 Name: BACU001729/1-682 Len: 726 Check: 3569 Weight: 1.00 Name: ENSBTAP00000028266/1-668 Len: 726 Check: 5371 Weight: 1.00 // 1 50 ENSTTRP00000012225/1-683 ---------- ---------- ---------- --------FL EEVDVFTASH bmy_19096T0/1-688 MEIQMPDSGS KGRYLVSSTL KCQEWAYSLF ELISENKIFP LKMNFETGID ENSP00000344866/1-691 ---------- ---------- ---------- -----MAPFP EEVDVFTAPH BACU001729/1-682 ---------- ---------- ---------- --------MS EERDRVAGDE ENSBTAP00000028266/1-668 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000012225/1-683 WRRKQRVGYL --DXXXXXXX XXXXXXXXXX XXXXXXXXXX XXEQIENEYI bmy_19096T0/1-688 IIEDRF--NM TVELSKTNFS NNNDFRALLQ SLYATFKEFK MHEQIENEYI ENSP00000344866/1-691 WRMKQLVGLY CDKLSKTNFS NNNDFRALLQ SLYATFKEFK MHEQIENEYI BACU001729/1-682 GA------SL QAQLSKTNFS NNSDFRALLQ SLYATFKEFK MHEQIENEYI ENSBTAP00000028266/1-668 --------LL CTKLSKTNFS NNNDFRALLQ SLYATFKEFK MHEQIENEYI 101 150 ENSTTRP00000012225/1-683 IGLLQQRSQT I-NVHSDNKL SEMLSL-EKG LKNVKNEYEQ LNYAKQLKER bmy_19096T0/1-688 IGLLQQRSQT IYNVHSDNKL SEMLSLFEKG LKNVKNEYEQ LNYAKQLKER ENSP00000344866/1-691 IGLLQQRSQT IYNVHSDNKL SEMLSLFEKG LKNVKNEYEQ LNYAKQLKER BACU001729/1-682 IGLLQQRSQT IYNVHSDNKL SEMLSLFEKG LKNVKNEYEQ LNYAKQLKER ENSBTAP00000028266/1-668 IGLLQQRSQT IYNVHSDNKL SEMLSLFEKG LKNVKNEYEQ LNYAKQLKER 151 200 ENSTTRP00000012225/1-683 LEAFTRDFLP HMKEEEEXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_19096T0/1-688 LEAFTRDFLP HMKEEEEVFQ PMLMEYFTYE ELKDIKKKVI AQHCSQKDTA ENSP00000344866/1-691 LEAFTRDFLP HMKEEEEVFQ PMLMEYFTYE ELKDIKKKVI AQHCSQKDTA BACU001729/1-682 LEAFTRDFLP HMKEEEEVFQ PMLMEYFTYE ELKDIKKKVI AQHCSQKDTA ENSBTAP00000028266/1-668 LEAFTKDFLP HMKEEEEVFQ PMLMEYFTYE ELKDIKKKVI AQHCSQKDTA 201 250 ENSTTRP00000012225/1-683 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_19096T0/1-688 ELLRGLSLWN QAEERQKFFK YSVDEKSDKE AEVSEQSTGI AHLPPEVMLS ENSP00000344866/1-691 ELLRGLSLWN HAEERQKFFK YSVDEKSDKE AEVSEHSTGI THLPPEVMLS BACU001729/1-682 ELLRGLSLWN QAEERQKFFK YSVDEKSDKE AEVSEQSTGI AHLPPEVMLS ENSBTAP00000028266/1-668 ELLRGLSLWN QAEERQKFFK YSVDEKSDKE AEVSEQSTGI THLPPEVMVS 251 300 ENSTTRP00000012225/1-683 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XDWYSGPATE bmy_19096T0/1-688 IFSYLNPQEL CRCSQVSTKW SQLAKTGSLW KHLYPVHWAR GDWYSGPATE ENSP00000344866/1-691 IFSYLNPQEL CRCSQVSMKW SQLTKTGSLW KHLYPVHWAR GDWYSGPATE BACU001729/1-682 IFSYLNPQEL CRCSQVSTKW SQLAKTGSLW KHLYPVHWAR GDWYSGPATE ENSBTAP00000028266/1-668 IFSYLNPQEL CRCSQVSTKW SQLAKTGSLW KHLYPVHWAR GDWYSGPAAE 301 350 ENSTTRP00000012225/1-683 LDTEPDEEWV KNRKDESRAF QEWDEDADID ESEESAEESI AISIAQMEKR bmy_19096T0/1-688 LDTEPDEEWV KNRKDESRAF QEWDEDADID ESEESAEESI AISIAQMEKR ENSP00000344866/1-691 LDTEPDDEWV KNRKDESRAF HEWDEDADID ESEESAEESI AISIAQMEKR BACU001729/1-682 LDTEPDEEWV KNRKDESRAF QEWDEDADID ESEESAEESI AISIAQMEKR ENSBTAP00000028266/1-668 LDTEPDEEWV KSRRDESRAF QEWDEDADID ESEESGEESI AISIAQMEKR 351 400 ENSTTRP00000012225/1-683 LLHGLIHNVL PYVGTSVKTL VLAYSCAVSS KMVRQILELC PNLEHLDLTQ bmy_19096T0/1-688 LLHGLIHNVL PYVGTSVKTL VLAYSCAVSS KMVRQILELC PNLEHLDLTQ ENSP00000344866/1-691 LLHGLIHNVL PYVGTSVKTL VLAYSSAVSS KMVRQILELC PNLEHLDLTQ BACU001729/1-682 LLHGLIHNVL PYVGTSVKTL VLAYSCAVSS KMVRQILELC PNLEHLDLTQ ENSBTAP00000028266/1-668 LLHGLIHNVL PYVGTSVKTL VLAYSSAVCS KMVRQILELC PNLEHLDLTQ 401 450 ENSTTRP00000012225/1-683 TDISDSAFDS WSWLGCCQSL RHLDLSGCEK ITDVALEKIS RALGILTSHQ bmy_19096T0/1-688 TDISDSAFDS WSWLGCCQSL RHLDLSGCEK ITDVALEKIS RALGVLTSHQ ENSP00000344866/1-691 TDISDSAFDS WSWLGCCQSL RHLDLSGCEK ITDVALEKIS RALGILTSHQ BACU001729/1-682 TDISDSAFDS WSWLGCCQSL RHLDLSGCEK ITDVALEKIS RALGILTSHQ ENSBTAP00000028266/1-668 TDISDSAFDS WSWLGCCQSL RHLDLSGCEK ITDVALEKIS RALGILTTHE 451 500 ENSTTRP00000012225/1-683 SGLLKTSTSK IASTTWKNKD ITMQSTKQYA CLPDITNKGI GEEIDNEHPW bmy_19096T0/1-688 SGLLKTSTSK ITSTAWKNKD ITMQSTKQYA CLHDITNKGI GEEIDNEHPW ENSP00000344866/1-691 SGFLKTSTSK ITSTAWKNKD ITMQSTKQYA CLHDLTNKGI GEEIDNEHPW BACU001729/1-682 SGLLKTSTSK ITSTTWKNKD ITMQSTKQYA CLHDITNKGI GEEIDNEHPW ENSBTAP00000028266/1-668 SGLLKTSTSK VTSTTWKNKD ITMQSFKQSA CLHDVTNKDI GEEVDNEHPW 501 550 ENSTTRP00000012225/1-683 TKPISSENFT SPYVWMLDAE DLADIEDAVE WRHRNVESLC VMETASNFSC bmy_19096T0/1-688 TKPISSENFT SPYVWMLDAE DLADIEDAVE WRHRNVESLC VMETASNFSC ENSP00000344866/1-691 TKPVSSENFT SPYVWMLDAE DLADIEDTVE WRHRNVESLC VMETASNFSC BACU001729/1-682 TKPISSENFT SPYVWMLDAE DLADIEDAVE WRHRNVESLC VMETASNFSC ENSBTAP00000028266/1-668 TKPISSDDFT SPYVWMLDAE DLADIEDAVE WRHRNVESLC VMETASNFSC 551 600 ENSTTRP00000012225/1-683 SSSGCYSKDI VGL-TSVCWQ QHCASPAFAY CGHSFCCTGT ALRTMSALPE bmy_19096T0/1-688 SSSGCYSKDI VGLRTSVCWQ QHCASPAFAY CGHSFCCTGT ALRTMSALPE ENSP00000344866/1-691 STSGCFSKDI VGLRTSVCWQ QHCASPAFAY CGHSFCCTGT ALRTMSSLPE BACU001729/1-682 SSSGCYSKDI VGLRTSVCWQ QHCASPAFTY CGHSFCCTGT ALRTMSALPE ENSBTAP00000028266/1-668 PSSACYSKDI VGLRTSVCWQ QHCASPAFAY CGHSYCCTGT ALRTMSALPE 601 650 ENSTTRP00000012225/1-683 SSALCRKASR TRLLRGTDLI YSGSEKTDQE TGRVLLFLSL SGCYQITDHG bmy_19096T0/1-688 SSALCRKASR TRLLRGTDLI YSGSEKTDQE TGRVLLFLSL SGCYQITDHG ENSP00000344866/1-691 SSAMCRKAAR TRLPRGKDLI YFGSEKSDQE TGRVLLFLSL SGCYQITDHG BACU001729/1-682 SSALCRKASR TRLLRGTDLI YSGSEKTDQE TGRVLLFLSL SGCYQITDHG ENSBTAP00000028266/1-668 SSALCRKAPR TRLLREKDLI YSGSEKSDQE TGRVLLFLSL SGCYQITDHG 651 700 ENSTTRP00000012225/1-683 LRVLTLGGGL PYLEHLNLSG CLTVTGAGLQ DLVSACPSLN DEYFYYCDNI bmy_19096T0/1-688 LSLF-----L PCIKE----- -------ELK VLMLT-PPVD AR---ICSVV ENSP00000344866/1-691 LRVLTLGGGL PYLEHLNLSG CLTITGAGLQ DLVSACPSLN DEYFYYCDNI BACU001729/1-682 LRVLTLGGGL PYLEHLNLSG CLTVTGAGLQ DLVSACPSLN DEYFYYCDNI ENSBTAP00000028266/1-668 LRVLTLGGGL PYLEHLNLSG CLTVTGAGLQ DLVSACPSLN DEYFYYCDNI 701 750 ENSTTRP00000012225/1-683 NGPHADTASG CQNLQCGFRA CCRSGE bmy_19096T0/1-688 FEPAAALAND P--------- ------ ENSP00000344866/1-691 NGPHADTASG CQNLQCGFRA CCRSGE BACU001729/1-682 NGPHADTASG CQNLQCGFRA CCRSGE ENSBTAP00000028266/1-668 NGPHADTASG CQNLQCGFRA CCRSGE