KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:35:32 2014 Check: 00 .. Name: bmy_11410T0/1-773 Len: 1218 Check: 8323 Weight: 1.00 Name: ENSTTRP00000009318/1-741 Len: 1218 Check: 4744 Weight: 1.00 Name: ENSP00000252744/1-1215 Len: 1218 Check: 8059 Weight: 1.00 Name: BACU006237/1-1013 Len: 1218 Check: 5718 Weight: 1.00 Name: ENSBTAP00000028278/1-1009 Len: 1218 Check: 5164 Weight: 1.00 // 1 50 bmy_11410T0/1-773 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009318/1-741 ---------- ---------- ---------- ---------- ---------- ENSP00000252744/1-1215 MAERGQQPPP AKRLCCRPGG GGGGGGSSGG GGGAGGGYSS ACRPGPRAGG BACU006237/1-1013 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028278/1-1009 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_11410T0/1-773 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009318/1-741 ---------- ---------- ---------- ---------- ---------- ENSP00000252744/1-1215 AAAAAACGGG AALGLLPPGK TQSPESLLDI AARRVAEKWP FQRVEERFER BACU006237/1-1013 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028278/1-1009 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_11410T0/1-773 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009318/1-741 ---------- ---------- ---------- ---------- ---------- ENSP00000252744/1-1215 IPEPVQRRIV YWSFPRSERE ICMYSSFNTG GGAAGGPGDD SGGGGGAGGG BACU006237/1-1013 MPWPNRTRLT DWW------- ---------- ---------- ---------- ENSBTAP00000028278/1-1009 -----GRKLL DF-------- ---------- ---------- ---------- 151 200 bmy_11410T0/1-773 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009318/1-741 ---------- ---------- ---------- ---------- ---------- ENSP00000252744/1-1215 GGGGSSSSPA ATSAAATSAA AAAAAAAAAA AAAAGAGAPS VGAAGAADGG BACU006237/1-1013 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028278/1-1009 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_11410T0/1-773 ---------- ---------- ---------- ------VLKL EPSSECVL-- ENSTTRP00000009318/1-741 ---------- ---------- ---------- ---------- ---------- ENSP00000252744/1-1215 DETRLPFRRG IALLESGCVD NVLQVGFHLS GTVTEPAIQS EPETVCNVAI BACU006237/1-1013 ---------- -----QRQRE AVFIGGFHLS GTVTEPAIQS EPETVCNVAI ENSBTAP00000028278/1-1009 ---------- ------GCND GLLKIGFHLS GTVTEPAIQS EPETVCNVAI 251 300 bmy_11410T0/1-773 ---------- --------LL FC-------- ---------- ---------- ENSTTRP00000009318/1-741 ---------- ---------- ---------- ---------- ---------- ENSP00000252744/1-1215 SFDRCKITSV TCSCGNKDIF YCAHVVALSL YRIRKPDQVK LHLPISETLF BACU006237/1-1013 SFDRCKITSV TCSCGNKDIF YCAHVVALSL YRIRKPDQVK LHLPISETLF ENSBTAP00000028278/1-1009 SFDRCKITSV TCSCGNKDIF YCAHVVALSL YRIRKPDQVK LHLPISETLF 301 350 bmy_11410T0/1-773 ---------- ---------- ------DALA YTVLGTSHQ- ---------- ENSTTRP00000009318/1-741 ---------- ---------- ---------- ---------- ---------- ENSP00000252744/1-1215 QMNRDQLQKF VQYLITVHHT EVLPTAQKLA DEILSQNSEI NQVHGAPDPT BACU006237/1-1013 QMNRDQLQKF VQYLITVHHT EVLPTAQKLA DEILSQNSEI NQVHGAPDPT ENSBTAP00000028278/1-1009 QMNRDQLQKF VQYLITVHHT EVLPTAQKLA DEILSQNSEI NQVHGAPDPT 351 400 bmy_11410T0/1-773 ---------S WNLHKSQ--- ---------- ---------- ---------- ENSTTRP00000009318/1-741 ---------- ---------- ---------- ---------- ---------- ENSP00000252744/1-1215 AGASIDDENC WHLDEEQVQE QVKLFLSQGG YHGSGKQLNL LFAKVREMLK BACU006237/1-1013 AGASIDDENC WHLDEEQVQE QVKLFLSQGG YHGSGKQLNL LFAKVREMLK ENSBTAP00000028278/1-1009 AGASIDDENC WHLDEEQVQE QVKLFLSQGG YHGSGKQLNL LFAKVREMLK 401 450 bmy_11410T0/1-773 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009318/1-741 ---------- ---------- ---------- ---------- ---------- ENSP00000252744/1-1215 MRDSNGARML TLITEQFMAD PRLSLWRQQG TAMTDKYRQL WDELGALWMC BACU006237/1-1013 MRDSNGARML TLITEQFMAD PRLSLWRQQG TAMTDKYRQL WDELGALWMC ENSBTAP00000028278/1-1009 MRDSNGARML TLITEQFMAD PRLSLWRQQG TAMTDKYRQL WDELGALWMC 451 500 bmy_11410T0/1-773 ---------- ---------- ---------- EAACRGKDAF NLSSDGCRVF ENSTTRP00000009318/1-741 ---------- ---------- --NGVDVCPW EDGNHGSELP NLTNALPQGA ENSP00000252744/1-1215 IVLNPHCKLE QKASWLKQLK KWNSVDVCPW EDGNHGSELP NLTNALPQGA BACU006237/1-1013 IVLNPHCKLE QKASWLKQLK KWNGVDVCPW EDGNHGSELP NLTNALPQGA ENSBTAP00000028278/1-1009 IVLNPHCKLE QKASWLKQLK KWNGVDVCPW EDGNHGSELP NLTNALPQGA 501 550 bmy_11410T0/1-773 VFDK--TNSS NRPHRTVFTR AIEACDLHWQ DSHLQHIISS DLYTNYCYHD ENSTTRP00000009318/1-741 NANQ---DSS NRPHRTVFTR AIEACDLHWQ DSHLQHIISS DLYTNYCYHD ENSP00000252744/1-1215 NANQ---DSS NRPHRTVFTR AIEACDLHWQ DSHLQHIISS DLYTNYCYHD BACU006237/1-1013 NANQ---DSS NRPHRTVFTR AIEACDLHWQ DSHLQHIISS DLYTNYCYHD ENSBTAP00000028278/1-1009 NANQEKTDSS NRPHRTVFTR AIEACDLHWQ DSHLQHIISS DLYTNYCYHD 551 600 bmy_11410T0/1-773 DAENSLFDSR GWPLWHEHVP TACARVDALR SHGYPREALR LAIAIVNTLR ENSTTRP00000009318/1-741 DAENSLFDSR GWPLWHEHVP TACARVDALR SHGYPREALR LAIAIVNTLR ENSP00000252744/1-1215 DTENSLFDSR GWPLWHEHVP TACARVDALR SHGYPREALR LAIAIVNTLR BACU006237/1-1013 DAENSLFDSR GWPLWHEHVP TACARVDALR SHGYPREALR LAIAIVNTLR ENSBTAP00000028278/1-1009 DTENSLFDSR GWPLWHEHVP TACARVDALR SHGYPREALR LAIAIVNTLR 601 650 bmy_11410T0/1-773 RQQQKQLEMF RTQKKELPHK SITSITNLEG WVGHPLDPVG TLFSSLMEAC ENSTTRP00000009318/1-741 RQQQKQLEMF RTQKKXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXMEAC ENSP00000252744/1-1215 RQQQKQLEMF RTQKKELPHK NITSITNLEG WVGHPLDPVG TLFSSLMEAC BACU006237/1-1013 RQQQKQLEMF RTQKKELPHK SITSITNLEG WVGHPLDPVG TLFSSLMEAC ENSBTAP00000028278/1-1009 RQQQKQLEMF RTQKKELPHK SITSITNLEG WVGHPLDPVG TLFSSLMEAC 651 700 bmy_11410T0/1-773 RTDDESFPVF SDFTENMGQC KSLEYQHLPA HKFLEEGESY LTLAVEVALI ENSTTRP00000009318/1-741 RTDDES-SCV SDFTENMGQC KSLEYQHLPA HKFLEEGESY LTLAVEVALI ENSP00000252744/1-1215 RIDDENLSGF SDFTENMGQC KSLEYQHLPA HKFLEEGESY LTLAVEVALI BACU006237/1-1013 RTDDESFPVF SDFTENMGQC KSLEYQHLPA HKFLEEGESY LTLAVEVALI ENSBTAP00000028278/1-1009 RTDDEGFPVF SDFTENMGQC KSLEYQHLPA HKFLEEGESY LTLAVEVALI 701 750 bmy_11410T0/1-773 GLGQQRIMPD GLYTQEKVCR NEEQLISKLQ EIELDDTLVK IFRKQAVFLL ENSTTRP00000009318/1-741 GLGQQRIMPD GLYTQEKVCR NEEQLISKLQ EIELDDTLVK IFRKQAVFLL ENSP00000252744/1-1215 GLGQQRIMPD GLYTQEKVCR NEEQLISKLQ EIELDDTLVK IFRKQAVFLL BACU006237/1-1013 GLGQQRIMPD GLYTQEKVCR NEEQLISKLQ EIELDDTLVK IFRKQAVFLL ENSBTAP00000028278/1-1009 GLGQQRVMPD GLYTQEKVCR NEEQLISKLQ EIELDDTLVK IFRKQAVFLL 751 800 bmy_11410T0/1-773 EAGPYSGLGE IIHRESVPMH TFAKYLFTSL LPHDAELAYK IALRAMRLLV ENSTTRP00000009318/1-741 EAGPYSGLGE IIHRESVPMH TFAKYLFT-L STHDAELAYK IALXXXXLLV ENSP00000252744/1-1215 EAGPYSGLGE IIHRESVPMH TFAKYLFTSL LPHDAELAYK IALRAMRLLV BACU006237/1-1013 EAGPYSGLGE IIHRESVPMH TFAKYLFTSL LPHDAELAYK IALRAMRLLV ENSBTAP00000028278/1-1009 EAGPYSGLGE IIHRESVPMH TFAKYLFTSL LPHDAELAYK IALRAMRLLV 801 850 bmy_11410T0/1-773 LESTAPAGDL TRPHHMASVV PNRYPRWFTL SHIESQQCEL ASTMLTAAKG ENSTTRP00000009318/1-741 LESTAPTGDL TRPHHMASVV PNRYPRWFTL SHIESQQCEL ASTMLTAAKG ENSP00000252744/1-1215 LESTAPSGDL TRPHHIASVV PNRYPRWFTL SHIESQQCEL ASTMLTAAKG BACU006237/1-1013 LESTAPAGDL TRPHHMASVV PNRYPRWFTL SHIESQQCEL ASTMLTAAKG ENSBTAP00000028278/1-1009 LESTAPTGDL TRPHHIASVV PNRYPRWFTL SHIESQQCEL ASTMLTAAKG 851 900 bmy_11410T0/1-773 DVRRLETVLE SIQKNIHSSS HIFKLAQDAF KIATLMDSLP DITLLKVSLE ENSTTRP00000009318/1-741 DVRRLETVLE SIQKNIHSSS HIFKLAQDAF KIATLMDSLP DITLLKVSLE ENSP00000252744/1-1215 DVRRLETVLE SIQKNIHSSS HIFKLAQDAF KIATLMDSLP DITLLKVSLE BACU006237/1-1013 DVRRLETVLE SIQKNIHSSS HIFKLAQDAF KIATLMDSLP DITLLKVSLE ENSBTAP00000028278/1-1009 DVRRLETVLE SIQKNIHSSS HIFKLAQDAF KIATLMDSLP DITLLKVSLE 901 950 bmy_11410T0/1-773 LGLQVMRMTL STLNWRRREM VRWLVTCATE VGVYALDSIM QSWFTLFTPT ENSTTRP00000009318/1-741 LGLQVMRMTL STLNWRRREM VRWLVTCATE VGVYALDSIM QSWFTLFTPT ENSP00000252744/1-1215 LGLQVMRMTL STLNWRRREM VRWLVTCATE VGVYALDSIM QTWFTLFTPT BACU006237/1-1013 LGLQVMRMTL STLNWRRREM VRWLVTCATE VGVYALDSIM QSWFTLFTPT ENSBTAP00000028278/1-1009 LGLQVMRMTL STLNWRRREM VRWLVTCATE VGVYALDSIM QSWFTLFTPT 951 1000 bmy_11410T0/1-773 EATSIVATTV MSNSTIVRLH LDCHQQEKLA SSARTLALQC AMKDPQNCAL ENSTTRP00000009318/1-741 EATSIVATTV MSNSTIVRLH LDCHQQEKLA SSARTLALQC AMKDPQNCAL ENSP00000252744/1-1215 EATSIVATTV MSNSTIVRLH LDCHQQEKLA SSARTLALQC AMKDPQNCAL BACU006237/1-1013 EATSIVATTV MSNSTIVRLH LDCHQQEKLA SSARTLALQC AMKDPQNCAL ENSBTAP00000028278/1-1009 EATSIVATTV MSNSTIVRLH LDCHQQEKLA SSARTLALQC AMKDPQNCAL 1001 1050 bmy_11410T0/1-773 SALTLCEKDH IAFETAYQIV LDAATTGMSY TQLFTIARYM EHRGYPMRAY ENSTTRP00000009318/1-741 SALTLCEKDH IAFETAYQIV LDAATTGMSY TQLFTIARYM EHRGYPMRAY ENSP00000252744/1-1215 SALTLCEKDH IAFETAYQIV LDAATTGMSY TQLFTIARYM EHRGYPMRAY BACU006237/1-1013 SALTLCEKDH IAFETAYQIV LDAATTGMSY TQLFTIARYM EHRGYPMRAY ENSBTAP00000028278/1-1009 SALTLCEKDH IAFETAYQIV LDAATTGMSY TQLFTIARYM EHRGYPMRAY 1051 1100 bmy_11410T0/1-773 KLATLAMTHL NLSYNQDTHP AINDVLWACA LSHSLGKNEL AAIIPLVVKS ENSTTRP00000009318/1-741 KLATLAMTHL NLSYNQDTHP AINDVLWACA LSHSLGKNEL AAIIPLVVKS ENSP00000252744/1-1215 KLATLAMTHL NLSYNQDTHP AINDVLWACA LSHSLGKNEL AAIIPLVVKS BACU006237/1-1013 KLATLAMTHL NLSYNQDTHP AINDVLWACA LSHSLGKNEL AAIIPLVVKS ENSBTAP00000028278/1-1009 KLATLAMTHL NLSYNQDTHP AINDVLWACA LSHSLGKNEL AAIIPLVVKS 1101 1150 bmy_11410T0/1-773 VKCATVLSDI LRRCTLTTPG MVGLHGRRNS GKLMSLDKAP LRQLLDATIG ENSTTRP00000009318/1-741 VKCATVLSDI LRRCTLTTPG MVGLHGRRNS GKLMSLDKAP LRQLLDATIG ENSP00000252744/1-1215 VKCATVLSDI LRRCTLTTPG MVGLHGRRNS GKLMSLDKAP LRQLLDATIG BACU006237/1-1013 VKCATVLSDI LRRCTLTTPG MVGLHGRRNS GKLMSLDKAP LRQLLDATIG ENSBTAP00000028278/1-1009 VKCATVLSDI LRRCTLTTPG VVGLHGRRNS GKLMSLDKAP LRQLLDATIG 1151 1200 bmy_11410T0/1-773 AYINTTHSRL THISPRHYSE FIEFLSKARE TFLMAHDGHI QFTQFIDNLK ENSTTRP00000009318/1-741 AYINTTHSRL THISPRHYSE FIEFLSKARE TFLMAHDGHI QFTQFIDNLK ENSP00000252744/1-1215 AYINTTHSRL THISPRHYSE FIEFLSKARE TFLMAHDGHI QFTQFIDNLK BACU006237/1-1013 AYINTTHSRL THISPRHYSE FIEFLSKARE TFLMAHDGHI QFTQFIDNLK ENSBTAP00000028278/1-1009 AYINTTHSRL THISPRHYSE FIEFLSKARE TFLMAHDGHI QFTQFIDNLK 1201 1250 bmy_11410T0/1-773 QIYKGKKKLM MLVRERFG ENSTTRP00000009318/1-741 QIYKGKKKLM MLVRERFG ENSP00000252744/1-1215 QIYKGKKKLM MLVRERFG BACU006237/1-1013 QIYKGKKKLM MLVRERFG ENSBTAP00000028278/1-1009 QIYKGKKKLM MLVRERFG