KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:35:33 2014 Check: 00 .. Name: ENSP00000341351/1-942 Len: 948 Check: 5300 Weight: 1.00 Name: ENSBTAP00000028279/1-876 Len: 948 Check: 9414 Weight: 1.00 Name: BACU010760/1-844 Len: 948 Check: 182 Weight: 1.00 Name: bmy_07723T0/1-622 Len: 948 Check: 8617 Weight: 1.00 Name: ENSTTRP00000013216/1-570 Len: 948 Check: 993 Weight: 1.00 // 1 50 ENSP00000341351/1-942 MKRRAGLGGS MRSVVGFLSQ RGLHGDPLLT QDFQRRRLRG CRNLYKKDLL ENSBTAP00000028279/1-876 ---------- ---------- ---------- ---------- ---------- BACU010760/1-844 ---------- ---------- ---------- ---------- ---------- bmy_07723T0/1-622 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013216/1-570 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000341351/1-942 GHFGCVNAIE FSNNGGQWLV SGGDDRRVLL WHMEQAIHSR VKPIQLKGEH ENSBTAP00000028279/1-876 ---------- ---------- -GGDDRRVLL WHMEQAIHSR VKPIQLKGEH BACU010760/1-844 ---------- ---------- ---------- ---------M INCPDPTNSH bmy_07723T0/1-622 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013216/1-570 ---------- ---------- --GDDRRVLL WHMEQAIHSR VKPIQLKGEH 101 150 ENSP00000341351/1-942 HSNIFCLAFN SGNTKVFSGG NDEQVILHDV ESSETLDVFA HEDAVYGLSV ENSBTAP00000028279/1-876 HSNIFCLAFN SGNTKVFSGG NDEQVILHDV ESSETLDVFA HEDAVYGLSV BACU010760/1-844 KSSI------ ---------G NDEQVILHDV ESSETLDVFA HEDAVYGLSV bmy_07723T0/1-622 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013216/1-570 HSNIFCLAFN SGNTKVFSGG NDEQVILHDV ESSETLDVFA HEDAVYGLSV 151 200 ENSP00000341351/1-942 SPVNDNIFAS SSDDGRVLIW DIRESPHGEP FCLANYPSAF HSVMFNPVEP ENSBTAP00000028279/1-876 SPVNDNIFAS SSDDGRVLIW DIRESPHGEP FCLANYPSAF HSVMFNPVEP BACU010760/1-844 SPVNDNIFAS SSDDGRVLIW DIRESPHGEP FCLANYPSAF HSVMFNPVEP bmy_07723T0/1-622 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013216/1-570 SPVNDNIFAS SSDDGRVLIW DIRESPHGEP FCLANYPSAF HSVMFNPVEP 201 250 ENSP00000341351/1-942 RLLATANSKE GVGLWDIRKP QSSLLRYGGN LSLQSAMSVR FNSNGTQLLA ENSBTAP00000028279/1-876 RLLATANSKE GVGLWDIRKP QSSLLRYGGN LSLQSAMSVR FNSNGTQLLA BACU010760/1-844 RLLATANSKE GVGLWDIRKP QSSLLRYGGN LSLQSAMSVR FNSNGTQLLA bmy_07723T0/1-622 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013216/1-570 RLLATANSKE GVGLWDIRKP QSSLLRYGGN LSLQSAMSVR FNSNGTQLLA 251 300 ENSP00000341351/1-942 LRRRLPPVLY DIHSRLPVFQ FDNQGYFNSC TMKSCCFAGD RDQYILSGSD ENSBTAP00000028279/1-876 LRRRLPPVLY DIHSRLPVFQ FDNQGYFNSC TMKSCCFAGD RDQYILSGSD BACU010760/1-844 LRRRLPPVLY DIHSRLPVFQ FDNQGYFNSC TMKSCCFAGD RDQYILSGSD bmy_07723T0/1-622 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013216/1-570 LRRRLPPVLY DIHSRLPVFQ FDNQGYFNSC TMKSCCFAGD RDQYILSGSD 301 350 ENSP00000341351/1-942 DFNLYMWRIP ADPEAGGIGR VVNGAFMVLK GHRSIVNQVR FNPHTYMICS ENSBTAP00000028279/1-876 DFNLYMWRIP ADPEAGGIGR VVNGAFMVLK GHRSIVNQVR FNPHTYMICS BACU010760/1-844 DFNLYMWRIP ADPEAGGIGR VVNGAFMVLK GHRSIVNQVR FNPHTYMICS bmy_07723T0/1-622 ---------- ---------- ------MVLK GHRSIVNQVR FNPHTYMICS ENSTTRP00000013216/1-570 DFNLYMWRIP ADPEAGGIGR VVNGAFMVLK GHRSIVNQVR FNPHTYMICS 351 400 ENSP00000341351/1-942 SGVEKIIKIW SPYKQPGCTG DLDGRIEDDS RCLYTHEEYI SLVLNSGSGL ENSBTAP00000028279/1-876 SGVEKIIKIW SPYKQPGCTG DLDGRIEDDS RCLYTHEEYI SLVLNSGSGL BACU010760/1-844 SGVEKIIKIW SPYKQPGCTG DLDGRIEDDS RCLYTHEEYI SLVLNSGSGL bmy_07723T0/1-622 SGVEKIIKIW SPYKQPGCTG DLDGRIEDDS RCLYTHEEYI SLVLNSGSGL ENSTTRP00000013216/1-570 SGVEKIIKIW SPYKQPGCTG DLDGRIEDDS RCLYTHEEYI SLVLNSGSGL 401 450 ENSP00000341351/1-942 SHDYANQSVQ EDPRMMAFFD SLVRREIEGW SSDSDSDLSE STILQLHAGV ENSBTAP00000028279/1-876 SHDYANQSVQ EDPRMMAFFD SLVRREIEGW SSDSDSDLSE STILQLHAGV BACU010760/1-844 SHDYANQSVQ EDPRMMAFFD SLVRREIEGW SSDSDSDLSE STILQLHAGV bmy_07723T0/1-622 SHDYANQSVQ EDPRMMAFFD SLVRREIEGW SSDSDSDLSE STILQLHAGV ENSTTRP00000013216/1-570 SHDYANQSVQ EDPRMMAFFD SLVRREIEGW SSDSDSDLSE STILQLHAGV 451 500 ENSP00000341351/1-942 SERSGYTDSE SSASLPRSPP PTVDESADNA FHLGPLRVTT TNTVASTPPT ENSBTAP00000028279/1-876 SERSGYTDSE SSASLPRSPP PTVDESADSA FHLGPLRVTA TNVVASTPPL BACU010760/1-844 SERSGYTDSE SWPSLPRSPP PTVDESADSA FHLGPLRVTA TNVVASTPPP bmy_07723T0/1-622 SERSGYTDSE SSASLPRSPP PTVDESADSA FHLGPLRVTA TNVVASTPPP ENSTTRP00000013216/1-570 SERSGYTDSE SSASLPRSPP PTVDESADSA FHLGPLRVTA TNVVASTPPP 501 550 ENSP00000341351/1-942 PTCEDAASRQ QRLSALRRYQ DKRLLALSNE SDSEENVCEV ELDTDLFPRP ENSBTAP00000028279/1-876 PSCEDATSRQ QRLSALRRYQ DKRLLALSNE SDSEENACEV ELDTDLFPRP BACU010760/1-844 PTCEDATARQ QRLSALRRYQ DKRLLALSNE SDSEENACEV ELDTDLFPRP bmy_07723T0/1-622 PTCEDATARQ QRLSALRRYQ DKRLLALSNE SDSEENACEV ELDTDLFPRP ENSTTRP00000013216/1-570 PTCEDATTRQ QRLSALRRYQ DKRLLALSNE SDSEENACEV ELDTDLFPRP 551 600 ENSP00000341351/1-942 RSPSPEDESS SSSSSSSSED EEELNERRAS TWQRNAMRRR QKTTREDKPS ENSBTAP00000028279/1-876 RSPSPEDESS SSSSSSSSEE EEELNERRAS TRQRNAMRRR QKTPREERPG BACU010760/1-844 RSPSPEDESS SSGSPSSSED EEELNERRAS TRQRNAMRRR QKMPREERPG bmy_07723T0/1-622 RSPSPEDESS SSGSPSSSED EEELNERRAS TRQRNAMRRR QKMPREERPG ENSTTRP00000013216/1-570 RSPSPEDESS SSGSPSSSED EEELNERRAS TRQRNAMRRR QKMPREERPG 601 650 ENSP00000341351/1-942 APIKPTNTYI GEDNYDYPQI KVDDLSSSPT SSPERSTSTL EIQPSRASPT ENSBTAP00000028279/1-876 APPKPTDTYI GEDNYDYPQI KVDDLSSSPT SSPDRSASTL EIQPSRASPT BACU010760/1-844 APTKPTDTCI GEDNYDYPQI KVDDLSSSPT SSPERNTSTL EIQPSRASPT bmy_07723T0/1-622 APTKPTDTCI GEDNYDYPQI KVDDLSSSPT SSPERNTSTL EIQPSRASPT ENSTTRP00000013216/1-570 APTKPTDTCI GEDNYDYPQI KVDDLSSSPT SSPERNTSTL EI-------- 651 700 ENSP00000341351/1-942 SDIESVERKI YKAYKWLRYS YISYSNNKDG ETSLVTGEAD EGRAGTSHKD ENSBTAP00000028279/1-876 SDIESVERKI YKAYKWLRYS YISYSNNKDG ESSLVSGEAD EGRAGTSHKD BACU010760/1-844 SDIESVERKI YKAYKWLRYS YISYSNNKEG ESSLVSGEAD EGRAGTSHKD bmy_07723T0/1-622 SDIESVERKI YKAYKWLRYS YISYSNNKEG ESSLVSGEAD EGRAGTSHKD ENSTTRP00000013216/1-570 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000341351/1-942 NPAPSSSKEA CLNIAMAQRN QDLPPEGCSK DTFKEETPR- TPSNGPGHEH ENSBTAP00000028279/1-876 NPAPSSSKEA CLNSAVAQRT QDMPPEGRSK DTFKEGTSAV SPNNGPGPEP BACU010760/1-844 NPAPSSSKEA CLNTAMAQRN QDLPPECHGK DAFKEGTSAI NPSNGPGHEP bmy_07723T0/1-622 NPAPSSSKEA CLNMAMAQRN QDLPPEGHGK DAFKEGTSAI NPSNGPGHEP ENSTTRP00000013216/1-570 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000341351/1-942 SSHAWAEVPE GTSQDTGNS- GSVEHPFETK KLNGKA---- LSSRAEEPPS ENSBTAP00000028279/1-876 SGHPWAEAPE DASQD-SNNG GTVEHTFETK KLNGKALSKA LSSRAEEPPS BACU010760/1-844 SGHPWAEAPE DTSQDTSNTG GSVEHSFETK KLNGKALSKS LSSRAEEPPS bmy_07723T0/1-622 SGHPWAEAPE DTSQDTSNTG GSVEHSFETK KLNGKALSKA LSSRAEEPPS ENSTTRP00000013216/1-570 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000341351/1-942 PPVPKASGST LNSGSGNCPR TQSDDSEERS LETICANHNN GRLHPRPPHP ENSBTAP00000028279/1-876 PPVPKASGST LSSGSGNCLR TQSDDSEERS LETICANHNN GRLHPRPPHP BACU010760/1-844 PPVPKASGSA LSSGSGNCLR TQSDDGEERS LEAICANHNN GRLHPRPPHP bmy_07723T0/1-622 PPVPKASGSA LSSGSGSCLR TQSDDSEERS LEAICANHNN GRLHPRPPHP ENSTTRP00000013216/1-570 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000341351/1-942 HNNGQNLGEL EVVAYSSPGH SDTDRDNSSL TGTLLHKDCC GSEMACETPN ENSBTAP00000028279/1-876 HSNGQNFGEL EALACSSPGR VDTDHDNLSL TGILLHKDCC GSEMACESPS BACU010760/1-844 HSNGQNFGEL EAVACSSPGR SDTDRDNLSL TGMLLHKDCC GSEMACETPS bmy_07723T0/1-622 HSNGQNFGEL EAVACSSPGR SDTDRDNLSL TGMLLHKDCC GSEMACETPS ENSTTRP00000013216/1-570 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000341351/1-942 AGTREDPTDT PATDSSRAVH GHSGLKRQRI ELEDTDSENS SSEKKLKT ENSBTAP00000028279/1-876 AGTREDPTDP PDTDSSRAVH GHSGLKRHRI ELEDPDSENS SSEKKLKT BACU010760/1-844 AGTREDPTDP PDTDSSRAVH GHSGFKRHRI ELEDTDSENS SSEKKLKT bmy_07723T0/1-622 AGTREDPTDP PDTDSSRAVH GHSGFKRHRI ELEDTDSENS SSEKKLKT ENSTTRP00000013216/1-570 ---------- ---------- ---------- ---------- --------