KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:35:33 2014 Check: 00 .. Name: BACU020501/1-161 Len: 226 Check: 2108 Weight: 1.00 Name: bmy_03809T0/1-226 Len: 226 Check: 6202 Weight: 1.00 Name: ENSP00000385432/1-198 Len: 226 Check: 6428 Weight: 1.00 Name: ENSTTRP00000015988/1-198 Len: 226 Check: 7221 Weight: 1.00 Name: ENSBTAP00000028280/1-198 Len: 226 Check: 6976 Weight: 1.00 // 1 50 BACU020501/1-161 --------MD RSFIFGW--- ---------- ---IYSGFSR MLQF---GLY bmy_03809T0/1-226 MPLPVAGRGR GSCFLPWNLA AGKRTGSFRA SRGLSDGHPD RTPLLSNGLY ENSP00000385432/1-198 ---------- MSFIFDW--- ---------- ---IYSGFSS VLQFL--GLY ENSTTRP00000015988/1-198 ---------- MSFIFDW--- ---------- ---IYSGFSS VLQFL--GLY ENSBTAP00000028280/1-198 ---------- MSFIFDW--- ---------- ---IYSGFSS VLQFL--GLY 51 100 BACU020501/1-161 KRTGKLVFLG LDNVGKTTLL YMLKDDRLG- HVPTLPPLSK ELTITGMTFA bmy_03809T0/1-226 KKTGKLVFLG LDNAGKTTLL HMLKDDRLGQ HVPTLHPTSE ELTIAGMTFT ENSP00000385432/1-198 KKTGKLVFLG LDNAGKTTLL HMLKDDRLGQ HVPTLHPTSE ELTIAGMTFT ENSTTRP00000015988/1-198 KKTGKLVFLG LDNAGKTTLL HMLKDDRLGQ HVPTLHPTSE ELTIAGMTFT ENSBTAP00000028280/1-198 KKTGKLVFLG LDNAGKTTLL HMLKDDRLGQ HVPTLHPTSE ELTIAGMTFT 101 150 BACU020501/1-161 TFDLVEHVQA QRVWKNYLPA INGITLLVDC ADHKRLLESK EELDSLRTVE bmy_03809T0/1-226 TFDLGGHVQA RRVWKNYLPA INGIVFLVDC ADHERLLESK EELDSLMTDE ENSP00000385432/1-198 TFDLGGHVQA RRVWKNYLPA INGIVFLVDC ADHERLLESK EELDSLMTDE ENSTTRP00000015988/1-198 TFDLGGHVQA RRVWKNYLPA INGIVFLVDC ADHERLLESK EELDSLMTDE ENSBTAP00000028280/1-198 TFDLGGHVQA RRVWKNYLPA INGIVFLVDC ADHERLLESK EELDSLMTDE 151 200 BACU020501/1-161 TISNVSIPIL GNKINRPEAI SEERLREMFG LHGQTTGKS- ---------- bmy_03809T0/1-226 TVANVPILIL GNKIDRPEAI SEERLREMFG LYGQTTGKGS VSLKELNARP ENSP00000385432/1-198 TIANVPILIL GNKIDRPEAI SEERLREMFG LYGQTTGKGS ISLKELNARP ENSTTRP00000015988/1-198 TVANVPILIL GNKIDRPEAI SEERLREMFG LYGQTTGKGS VSLKELNARP ENSBTAP00000028280/1-198 TVANVPILIL GNKIDRPEAI SEERLREMFG LYGQTTGKGN VSLKELNARP 201 250 BACU020501/1-161 ---------- ---------- ------ bmy_03809T0/1-226 LEVFMCSVLK RQGYGEGFRW MAQYID ENSP00000385432/1-198 LEVFMCSVLK RQGYGEGFRW MAQYID ENSTTRP00000015988/1-198 LEVFMCSVLK RQGYGEGFRW MAQYID ENSBTAP00000028280/1-198 LEVFMCSVLK RQGYGEGFRW MAQYID