KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:35:39 2014 Check: 00 .. Name: ENSBTAP00000028346/1-828 Len: 838 Check: 651 Weight: 1.00 Name: ENSP00000394720/1-837 Len: 838 Check: 2665 Weight: 1.00 Name: ENSTTRP00000015254/1-827 Len: 838 Check: 1918 Weight: 1.00 Name: bmy_10332T0/1-793 Len: 838 Check: 608 Weight: 1.00 Name: BACU016077/1-822 Len: 838 Check: 3516 Weight: 1.00 // 1 50 ENSBTAP00000028346/1-828 VRLAAMGRGS RASALLGALP --LPLLLLLP LLLL--PPSP SRALTPRISL ENSP00000394720/1-837 MLRTAMGLRS WLAAPWGALP PRPPLLLLLL LLLLLQPPPP TWALSPRISL ENSTTRP00000015254/1-827 VPRAAMGRGS RP-------P --PPLLLLML LLLL--PPSP IRALAPRISL bmy_10332T0/1-793 ---------- ---------- ---------- ---------- -----PSIVL BACU016077/1-822 -----MGRGS RP-------P --PPLLLLML LLLL--PPSP IRALAPRISL 51 100 ENSBTAP00000028346/1-828 PLGSEKRPFL RFEAENVFNY TSFLLSKDGR TVYVGAREAL LALNSSVSFL ENSP00000394720/1-837 PLGSEERPFL RFEAEHISNY TALLLSRDGR TLYVGAREAL FALSSNLSFL ENSTTRP00000015254/1-827 PLGSEKRSLL RFEVDHISNY TALLLSRDGR TLYVGAREAL FALNSSVSFL bmy_10332T0/1-793 SPGSEKQSLL RFEVDHISNY TALLLSRDGR TLYVGAREAL FALNXSGSFL BACU016077/1-822 PLGSEKQSLL RFEVDHISNY TALLLSRDGR TLYVGAREAL FALNSSGSFL 101 150 ENSBTAP00000028346/1-828 PGGEYQELLW RADAERKKQC SFKGKNPERD CQNYIKILLP LNSSHLIACG ENSP00000394720/1-837 PGGEYQELLW GADAEKKQQC SFKGKDPQRD CQNYIKILLP LSGSHLFTCG ENSTTRP00000015254/1-827 PGGGYQELLW SADAERKQQC SFKGKDPQRD CQNYIKILLP LNSSHLFTCG bmy_10332T0/1-793 PGGGYQELLW SADAERKQQC SFKGKDPQRD CQNYIKILLP LNSSHLFTCG BACU016077/1-822 PGGGYQELLW SADAERKQQC SFKGKDPQRD CQNYIKILLP LNSSHLFTCG 151 200 ENSBTAP00000028346/1-828 TEAFSPACTY IDVENFTLAQ DKQGNILLED GKGRCPFDPN FKSTALVIDG ENSP00000394720/1-837 TAAFSPMCTY INMENFTLAR DEKGNVLLED GKGRCPFDPN FKSTALVVDG ENSTTRP00000015254/1-827 TAAFSPVCTY VNMENFTLAQ DVVGNILLED GKGRCPFDPN FKSTALVVDG bmy_10332T0/1-793 TAAFSPVCTY VNMENFTLAQ DVVGNILLED GKGRCPFDPN FKSTALVVDG BACU016077/1-822 TAAFSPVCTY VNMENFTLAQ DVVGNILLED GKGRCPFDPN FKSTALVVDG 201 250 ENSBTAP00000028346/1-828 ELYTGTVSSF QGSDPTISRS QSLRPIKTET SLNWLQDPAF MASAYIPESL ENSP00000394720/1-837 ELYTGTVSSF QGNDPAISRS QSLRPTKTES SLNWLQDPAF VASAYIPESL ENSTTRP00000015254/1-827 ELYTGTVSSF QGNDPAISRS QSLRPTKTES SLNWLQDPAF VASAYIPESL bmy_10332T0/1-793 ELYTGTVSSF QGNDPAISRS QSLRPTKTES SLNWLQDPAF VASAYIPESL BACU016077/1-822 ELYTGTVSSF QGNDPAISRS QSLRPTKTES SLNWLQDPAF VASAYIPESL 251 300 ENSBTAP00000028346/1-828 GSSEGDDDKI YFFFREIGQE LEFFENTMVS RIARICKGDE GGGRVLQQRW ENSP00000394720/1-837 GSLQGDDDKI YFFFSETGQE FEFFENTIVS RIARICKGDE GGERVLQQRW ENSTTRP00000015254/1-827 GSLQGDDDKI YFFFSETGQE FEFFENTIVS RIARVCKGDE GGERVLQQRW bmy_10332T0/1-793 GSLQGDDDKI YFFFSETGQE FEFFENTIVS RIARVCKGDA GGERVLQQRW BACU016077/1-822 GSLQGDDDKI YFFFSETGQE FEFFENTIVS RIARVCKGDE GGERVLQQRW 301 350 ENSBTAP00000028346/1-828 TSFLKAQLLC LRPDDGFPFN VLQDMFTLTP RPEDWPDTLF YGVFTSQWNG ENSP00000394720/1-837 TSFLKAQLLC SRPDDGFPFN VLQDVFTLSP SPQDWRDTLF YGVFTSQWHR ENSTTRP00000015254/1-827 TSFLKAQLLC LRPDDGFPFN VLQDVFTLSP SPQEWGDTLF YGVFTSQWHR bmy_10332T0/1-793 TSFLKAQLLC LRPDDGFPFN VLQDVFTLSP SPQEWRDTLF YGVFTSQWHR BACU016077/1-822 TSFLKAQLLC LRPDDGFPFN VLQDVFTLSP SPQEWRDTLF YGVFTSQWHR 351 400 ENSBTAP00000028346/1-828 GTTEGSAVCV FTMKDVQSTF NGFYKEVNRE TQQWYTVTHP VPSPRPGACI ENSP00000394720/1-837 GTTEGSAVCV FTMKDVQRVF SGLYKEVNRE TQQWYTVTHP VPTPRPGACI ENSTTRP00000015254/1-827 GTTEGSAICV FTMKDVQRAF NGLYKEVNRE TQQWYTVTHL VPSPRPGACI bmy_10332T0/1-793 GTTEGSAICV FTMRDVQRAF NGLYKEVNRE TQQWYTVTHP VPSPRPGACI BACU016077/1-822 GTTEGSAICV FTMRDVQRAF NGLYKEVNRE TQQWYTVTHP VPSPRPGACI 401 450 ENSBTAP00000028346/1-828 TNSARERKIN SSLQLPDRVL NFLKDHFLMD GQVRGRMLLL QPQARYQHVT ENSP00000394720/1-837 TNSARERKIN SSLQLPDRVL NFLKDHFLMD GQVRSRMLLL QPQARYQRVA ENSTTRP00000015254/1-827 TNSTRERKIS SSLQLPDRVL NFLKDHFLMD GQVRSRLLLL QPQARYQRVA bmy_10332T0/1-793 TNSARERKIS SSLQLPDRVL NFLKDHFLMD GQVRSRLLLL QPQARYQRVA BACU016077/1-822 NNSARERKIS SSLQLPDRVL NFLKDHFLMD GQVRSRLLLL QPQARYQRVA 451 500 ENSBTAP00000028346/1-828 VHRVLALNRT YDVLFLGTGD GWVHKAVSVG TAVHIIEELQ VFPAGQPVRN ENSP00000394720/1-837 VHRVPGLHHT YDVLFLGTGD GRLHKAVSVG PRVHIIEELQ IFSSGQPVQN ENSTTRP00000015254/1-827 VHRVPGLQRT YDVLFLGTSD GWLHKAVSVG PGVHIIEELQ IFSSGQPVQN bmy_10332T0/1-793 VHRVPGLQRT YDVLFLGTSD GWLHKAVSVG PGVHIIEELQ IFSSGQPVQN BACU016077/1-822 VHRVPGLQRT YDVLFLGTSD GWLHKVVSVG PGVHIIEELQ IFSSGQPVQN 501 550 ENSBTAP00000028346/1-828 LQLDADRGLL YAASHSSVVK VPVANCSLYQ SCRDCLLARD PYCAWSGWRC ENSP00000394720/1-837 LLLDTHRGLL YAASHSGVVQ VPMANCSLYR SCGDCLLARD PYCAWSGSSC ENSTTRP00000015254/1-827 LLLDADRGLL YAASHSGVVQ VPVANCSLYQ SCGDCLLARD PYCAWSGSSC bmy_10332T0/1-793 LLLDADRGLL YGASHSGVVQ VPVANCSLYQ SCGDCLLARD PYCAWSGSSC BACU016077/1-822 LLLDADRGLL YGASHSGVVQ VPVANCSLYQ SCGDCLLARD PYCAWSGSSC 551 600 ENSBTAP00000028346/1-828 ASVSLYQPEV AVRPWIQDIE GVSAKNACSP SKI--RAFVP KGEKPCEQVH ENSP00000394720/1-837 KHVSLYQPQL ATRPWIQDIE GASAKDLCSA SSVVSPSFVP TGEKPCEQVQ ENSTTRP00000015254/1-827 KHVSLYRPAM ASRPWIQDIE GANARELCNT SSSKARSFVP RGKKHCEPVQ bmy_10332T0/1-793 KHVSLYRPAV ASRPWIQDIE GANARELCNT SSSKGRTSIP RGEKHCEPVQ BACU016077/1-822 KHVSLYRPAV ASRPWIQDIE GANARELCNT SSSKGRTSVP RGEKHCEPVQ 601 650 ENSBTAP00000028346/1-828 FQPHTVNTLA CPLLSNLATR FWLHNGAPIN ASASFRVLAT GDLLLVGSQQ ENSP00000394720/1-837 FQPNTVNTLA CPLLSNLATR LWLRNGAPVN ASASCHVLPT GDLLLVGTQQ ENSTTRP00000015254/1-827 FQPHTVNTLA CPLLSNLATR LWLHNGVPIN ASASCRVLST GDLLLVGRQQ bmy_10332T0/1-793 FQPHTVNTLA CPLLSNLATR LWLHNGVPIN ASASCRVLST GDLLLVGSQQ BACU016077/1-822 FQPHTVNTLA CPLLSNLATR LWLHNGVPIN ASASCRVLST GDLLLVGSQQ 651 700 ENSBTAP00000028346/1-828 ELGLFQCWSL EGGIQQLEAS YCPKVVEDEA AGSEDRS--- -IIINTSRVS ENSP00000394720/1-837 -LGEFQCWSL EEGFQQLVAS YCPEVVEDGV ADQTDEGGSV PVIISTSRVS ENSTTRP00000015254/1-827 ELGEFQCWSL EEGFRQLEAS YCPKVVEDAV ADRADQSGSV PVIISTSRVS bmy_10332T0/1-793 ELGEFQCWSL EEGFRQLEAS YCPKVVGDAV ADRADRSGSV PVIINTSRVS BACU016077/1-822 ELGEFQCWSL EEGFRQLEAS YCPEVAGDPV ADRADRSGSV PVIINTSRVS 701 750 ENSBTAP00000028346/1-828 APAGGKASWR MDKSYWTEFL VMCVLFVFAV VLLILFFLYR HRGGMKVFLK ENSP00000394720/1-837 APAGGKASWG ADRSYWKEFL VMCTLFVLAV LLPVLFLLYR HRNSMKVFLK ENSTTRP00000015254/1-827 APAGGRASWG AEKSYWTEFL VMCTLFVFAM VLFILFFLYR HRGGMKVFLK bmy_10332T0/1-793 APAGGKASWG ADKSYWTEFL VMCALFVFAM VLFILFFLYR HRGGMKVFLK BACU016077/1-822 APAGGKASWG ADKSYWTEFL VMCALFVFAM VLFILFFLYR HRGGMKVFLK 751 800 ENSBTAP00000028346/1-828 QGECASVHPK TRPVVLPPET QPLNGVGPPS TPLDHQGYQA LLDSFQRSRV ENSP00000394720/1-837 QGECASVHPK TCPVVLPPET RPLNGLGPPS TPLDHRGYQS LSDSPPGSRV ENSTTRP00000015254/1-827 QGECASVHPK MHPVVLPPET RPLNGVGPPN TPLDHRGYQA LSDSSPGPRV bmy_10332T0/1-793 QGECASVHPK TRPVVLPPET RPLNGVGPPS TPLDHRGYQA LSDSSPGPRV BACU016077/1-822 QGECASVHPK TRPVVLPPET RPLNGVGPPS TPLDHRGYQA LSDSSPGPRV 801 850 ENSBTAP00000028346/1-828 FTESEKRPLS VQDSFVEVSP TCPRPRVRLG SEIRDSVV ENSP00000394720/1-837 FTESEKRPLS IQDSFVEVSP VCPRPRVRLG SEIRDSVV ENSTTRP00000015254/1-827 FTESEKRPLS IQDSFVEVSP VCPRPRVRLG SEIRDSVV bmy_10332T0/1-793 FTESEKRPLS IQDSFVEVSP VCPRPRVRLG SEIRDSVV BACU016077/1-822 FTESEKRPLS IQDSFVEVSP VCPQPRVRLG SEIRDSVV