KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:35:51 2014 Check: 00 .. Name: bmy_06716T0/1-393 Len: 397 Check: 720 Weight: 1.00 Name: ENSP00000423812/1-359 Len: 397 Check: 4589 Weight: 1.00 Name: ENSBTAP00000028386/1-361 Len: 397 Check: 122 Weight: 1.00 Name: BACU018342/1-359 Len: 397 Check: 6912 Weight: 1.00 Name: ENSTTRP00000000196/1-359 Len: 397 Check: 6610 Weight: 1.00 // 1 50 bmy_06716T0/1-393 MARPMLLLSL --GLLAGLLP ALAACPQNCH CHGDLQHVIC DKVGLQKIPK ENSP00000423812/1-359 MVRPMLLLSL --GLLAGLLP ALAACPQNCH CHSDLQHVIC DKVGLQKIPK ENSBTAP00000028386/1-361 MARPMLLLSL SLGLLASLLP ALAACPQNCH CHSDLQHVIC DKVGLQKIPK BACU018342/1-359 MARPMLLLSL --GLLAGLLP ALAACPQNCH CHGDLQHVIC DKVGLQKIPK ENSTTRP00000000196/1-359 MARPIVLLSL --GLLAGLLP ALAACPQNCH CHGDLQHVIC DKVGLQKIPK 51 100 bmy_06716T0/1-393 VSEKTKLLNL QRNNFPVLAA NSFRAMPNLV SLHLQHCQIR EVAAGAFRGL ENSP00000423812/1-359 VSEKTKLLNL QRNNFPVLAA NSFRAMPNLV SLHLQHCQIR EVAAGAFRGL ENSBTAP00000028386/1-361 VSEKTKLLNL QRNNFPVLAA NSFRAMPNLV SLHLQHCQIR EVAAGAFRGL BACU018342/1-359 VSEKTKLLNL QRNNFPVLAA NSFRAMPNLV SLHLQHCQIR EVAAGAFRGL ENSTTRP00000000196/1-359 VSEKTKLLNL QRNNFPVLAA NSFRAMPNLV SLHLQHCRIR EVAAGAFRGL 101 150 bmy_06716T0/1-393 KQLIYLYLSH NDIRVLRTGA FDDLTELTYL YLDHNKVTEL PRGLLSPLVN ENSP00000423812/1-359 KQLIYLYLSH NDIRVLRAGA FDDLTELTYL YLDHNKVTEL PRGLLSPLVN ENSBTAP00000028386/1-361 KQLIYLYLSH NDIRVLRAGA FDDLTELTYL YLDHNKVTEL PRGLLSPLVN BACU018342/1-359 KQLIYLYLSH NDIRVLRTGA FDDLSELTYL YLDHNKVTEL PRGLLSPLVN ENSTTRP00000000196/1-359 KQLIYLYLSH NDIRVLRTGA FDDLTELTYL YLDHNKVTEL PRGLLSPLVN 151 200 bmy_06716T0/1-393 LFILQLNNNK IRELRSGAFH GAKDLRWLYL SENSLSSLQP GTLDDVENLA ENSP00000423812/1-359 LFILQLNNNK IRELRAGAFQ GAKDLRWLYL SENALSSLQP GALDDVENLA ENSBTAP00000028386/1-361 LFILQLNNNK IRELRSGAFQ GAKDLRWLYL SENSLSSLQP GALDDVENLA BACU018342/1-359 LFILQLNNNK IRELRSGAFH GAKDLRWLYL SENSLSSLHP GTLDDVENLA ENSTTRP00000000196/1-359 LFILQLNNNK IRELRPGAFH GAKDLRWLYL SENSLSSLQP GALEDVENLA 201 250 bmy_06716T0/1-393 KFYLDRNQLS SYPLAALSKL RVVEDLKLSH NPLKSIPDNA FQSFGRYLET ENSP00000423812/1-359 KFHVDRNQLS SYPSAALSKL RVVEELKLSH NPLKSIPDNA FQSFGRYLET ENSBTAP00000028386/1-361 KFYLDRNQLS SYPSAALSKL RVVEELKLSH NPLKSIPDNA FQSFGRYLET BACU018342/1-359 KFYLDRNQLS SYPLAALSKL RVVEDLKLSH NPLKSIPDNA FQSFGRYLET ENSTTRP00000000196/1-359 KFYLDRNQLS SYPLAALSKL RVVEDLKLSH NPLKSIPDHA FQSFGRYLET 251 300 bmy_06716T0/1-393 LWLDNTNLEK FSDGAFLGVT TLKHVHLENN RLNQLPSSFP FDSLETLTLI ENSP00000423812/1-359 LWLDNTNLEK FSDGAFLGVT TLKHVHLENN RLNQLPSNFP FDSLETLALT ENSBTAP00000028386/1-361 LWLDNTNLEK FSDGAFLGVT TLKHVHLENN RLHQLPSNFP FDSLETLTLT BACU018342/1-359 LWLDNTNLEK FSDGAFLGVT TLKHVHLENN RLNQLPSSFP FDSLETLTLT ENSTTRP00000000196/1-359 LWLDNTNLEK FSDGAFLGVT TLKHVHLENN RLNQLPSSFP FHSLETLTLT 301 350 bmy_06716T0/1-393 NNPWKCGWKP RPPA--LMPL ACRPPSSGAS TFVTRTPSAA ASSPLRGPRK ENSP00000423812/1-359 NNPWKCTCQL RGLRRWLEAK ASRPDATCAS PAKFKGQHIR DTDAFRS--- ENSBTAP00000028386/1-361 NNPWKCTCQL RGLRRWLEAK TSRPDATCAS PAKFRGQHIR DTDAFRG--- BACU018342/1-359 NNPWKCTCQL QGLRRWLEAK TSRPDATCVS PAKFRGQHIR DTDAFRG--- ENSTTRP00000000196/1-359 NNPWKCTCQL QGLRRWLEAK TSRPDATCVS PAKFRGQHIR DTDAFRG--- 351 400 bmy_06716T0/1-393 PAAIKQVLTQ PVLVTGLCLL PEKLLILPPP TPTFSPQPLL MHKAVHT ENSP00000423812/1-359 ---------- -------CKF PTK------- ---------R SKKAGRH ENSBTAP00000028386/1-361 ---------- -------CKF PTK------- ---------R SKKAGRH BACU018342/1-359 ---------- -------CKF PTK------- ---------R SKKAGRH ENSTTRP00000000196/1-359 ---------- -------CKF PTK------- ---------R SKKAGRH