KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:35:52 2014 Check: 00 .. Name: ENSP00000258955/1-442 Len: 484 Check: 6604 Weight: 1.00 Name: ENSBTAP00000028387/1-442 Len: 484 Check: 8879 Weight: 1.00 Name: bmy_06714T0/1-442 Len: 484 Check: 5792 Weight: 1.00 Name: ENSTTRP00000000198/1-439 Len: 484 Check: 9584 Weight: 1.00 // 1 50 ENSP00000258955/1-442 ---------- ---------- ---------- ---------- --MALPGARA ENSBTAP00000028387/1-442 ---------- ---------- ---------- ---------- --MALPRSQA bmy_06714T0/1-442 APFLPPGRPI WPGSAHTGRF ALGSSRSRVL ARAPGRPATA GGTALPGVRA ENSTTRP00000000198/1-439 ---------- ---------- ---------- ---------- --TALPGVRA 51 100 ENSP00000258955/1-442 RGWAAAARAA QRRRRVENAG GSPSPEPAGR RAALYVHWPY CEKRCSYCNF ENSBTAP00000028387/1-442 RGWVKAAKMA QRRRPADDTG GPQSPAPGSQ RAALYVHWPY CEKRCSYCNF bmy_06714T0/1-442 RGWVKVAKMA QRRRLAEDAG GPRGPTPGSQ RAALYVHWPY CEKRCSYCNF ENSTTRP00000000198/1-439 RGWVKAAKMA QRRRLAEGAG GPRGPTPGSQ RAALYVHWP- CEKRCS-CNF 101 150 ENSP00000258955/1-442 NKYIPRRLEE AAMQKCLVTE AQTLLRLSGV QRVESVFFGG GTPSLASPHT ENSBTAP00000028387/1-442 NKYIPRGVDE AALRRCLVIE AQTLLRLSGV RRVESVFFGG GTPSLASPHT bmy_06714T0/1-442 NKYIPRGVDE AAMRRCLVTE AQTLLQLSGV RRVESVFFGG GTPSLASPHT ENSTTRP00000000198/1-439 NKYITRGVDE DAMRRC-VTE AQTMQQLSGV QRVESVFFGG GTPSLASPHT 151 200 ENSP00000258955/1-442 VAAVLEAVAQ AAHLPADLEV TLEANPTSAP GSRLAEFGAA GVNRLSIGLQ ENSBTAP00000028387/1-442 VAAVLEAVAQ AAHLPADSEV TLEANPTSAS GSRLAAFGAA GVNRLSIGLQ bmy_06714T0/1-442 VAAVLEAVAQ ATHLPADSEV TLEANPTSAP SSRLAAFRAA GVNRLSIGLQ ENSTTRP00000000198/1-439 VAAVLEAVAQ ATHLPADSEV TLEANPSSAP GSRLAAFRAA GVNRLSIGLQ 201 250 ENSP00000258955/1-442 SLDDTELRLL GRTHSACDAL RTLAEARRLF PGRVSVDLML GLPAQQVGPW ENSBTAP00000028387/1-442 SLDDTELQLL GRTHSARDAL QTLAEAQRLF PGRVSVDLML GLPAQQVGPW bmy_06714T0/1-442 SLDDTELQLL GRTHSASDAL QMLAEARRHF PGRVSVDLML GLPAQHVGPW ENSTTRP00000000198/1-439 SLDDTELQLL GRTHSASDAL QMLAEARRHF PGRVSVDLML GLPAQHVGPW 251 300 ENSP00000258955/1-442 LGQLQELLHH CDDHLSLYQL SLERGTALFA QVQRGALPAP DPELAAEMYQ ENSBTAP00000028387/1-442 LRQLQGLLRC CDDHVSLYQL SLERGTTLFT QVQQGALPAP DPELAAEMYQ bmy_06714T0/1-442 LGQLRKLLRH CDDHVSLYQL SLERGTALFT QVQQGALPAP DPELAAEMYQ ENSTTRP00000000198/1-439 LGQLRKLLRH CDDHVSLYQL SLERGTALFT QVQQGSLPAP DPELAAEMYQ 301 350 ENSP00000258955/1-442 RGRAVLREAG FHQYEVSNFA RNGALSTHNW TYWQCGQYLG VGPGAHGRFM ENSBTAP00000028387/1-442 EGRAVLREAG FRQYEVSNFA RNGALSTHNW TYWQCGQYLG VGPGAHGRFI bmy_06714T0/1-442 EGRAVLREAG FRQYEVSNFA RN-------- ---------- ---------- ENSTTRP00000000198/1-439 EGRAVLREAG FRQYEVSNFA RNGALSTHNW TYWQCGQYLG VGPGAHGRFV 351 400 ENSP00000258955/1-442 PQGAGGHTRE ARIQTLEPDN WMKEVMLFGH GTRKRVPLGR LELLEEVLAL ENSBTAP00000028387/1-442 PQGAGGHTRE ARIQTLEPDS WMKEVMLFGH GTRRRVPLSE LELLEEVLAM bmy_06714T0/1-442 ---------- ----TLEPDN WMKEVTLFGH GTRRRIPLGE LALLEEVLAM ENSTTRP00000000198/1-439 PQGAGGHTRE ARIQTLEPDN WMKEVMLFGH GTRRRIPLGE LALLEEVLAM 401 450 ENSP00000258955/1-442 GLRTDVGITH QHWQQFEPQL TLWDVFGANK EVQELLERGL LQLDHRGLRC ENSBTAP00000028387/1-442 GLRTDVGITH QHWQQFEPQL TLWDLFGANK EVKELQEQGL LLLDHRGLRC bmy_06714T0/1-442 GLRTDVGITH QHWQHFEPQL TLWDLFVADK EVQELLEQGL LLLDHRGLRC ENSTTRP00000000198/1-439 GLRTDVGITH QHWQQFEPQL TLWDLFVANE EVQELLEQGR LLLDRRGLRC 451 500 ENSP00000258955/1-442 SWEGLAVLDS LLLTLLPQLQ EAWQQRTPSP VPGG ENSBTAP00000028387/1-442 SWEGLAVLDS LLLSLLSRLQ EAWQQRIPSS VPRG bmy_06714T0/1-442 SWEGLAVLDS MLPTLLSRLQ EAWQQRTPSP VPGG ENSTTRP00000000198/1-439 SWEGLAVLDS MLPTLLSRLQ EAWQQRTPSP VPGG