KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:35:57 2014 Check: 00 .. Name: BACU001384/1-103 Len: 148 Check: 3348 Weight: 1.00 Name: ENSP00000351671/1-96 Len: 148 Check: 7948 Weight: 1.00 Name: ENSBTAP00000028430/1-96 Len: 148 Check: 6048 Weight: 1.00 Name: bmy_03800T0/1-102 Len: 148 Check: 7601 Weight: 1.00 Name: ENSTTRP00000012435/1-96 Len: 148 Check: 8022 Weight: 1.00 // 1 50 BACU001384/1-103 -MSPRWAWML AHQKQFFSIH QPHYTIFKLS DSLTLLASGK VRFYGRVQET ENSP00000351671/1-96 -MCCTKSLLL AALMSVLLLH ---------- ---------- --LCGESE-- ENSBTAP00000028430/1-96 MMCSSKNLLL AALMSVLLLH ---------- ---------- --FCSKSE-- bmy_03800T0/1-102 ---------- ---MSVLLLH ---------- ---------- --LCSKSE-- ENSTTRP00000012435/1-96 -MCSSKSLLL AALMSLLLLH ---------- ---------- --LCSKSE-- 51 100 BACU001384/1-103 LVQSESAGYE SSNFDCCLQY TEKILHPKFI VGFTQQLANE ACDINAVI-- ENSP00000351671/1-96 ---------A ASNFDCCLGY TDRILHPKFI VGFTRQLANE GCDINAIIFH ENSBTAP00000028430/1-96 ---------- ASNFDCCLRY TERILHPSIL VGFTQQLANE ACDINAVVFY bmy_03800T0/1-102 ---------A ASNFDCCLQY TEKILHPKFI VGFTQQLANE ACDINAVILY ENSTTRP00000012435/1-96 ---------A ASNFDCCLQY TEKILHPKFI VGFTQQLANE ACDINAVILY 101 150 BACU001384/1-103 ---------- ---------- ---------- ---------Q RVKKM--- ENSP00000351671/1-96 TKKKLSVCAN PKQTWVKYIV RLL------- --------SK KVKNM--- ENSBTAP00000028430/1-96 TRKKLAVCAD PKKKWVKQVV HML------- --------SQ RVKRM--- bmy_03800T0/1-102 TRRRLAVCAD PKKNWVKQAV HILRNPDFLI WLLSCLSKSQ EDVKMDTP ENSTTRP00000012435/1-96 TKRRLAVCAD PKKSWVKHVV HIL------- --------SQ RVKKM---