KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:01 2014 Check: 00 .. Name: BACU016046/1-440 Len: 547 Check: 8662 Weight: 1.00 Name: ENSBTAP00000028446/1-482 Len: 547 Check: 8259 Weight: 1.00 Name: bmy_11596T0/1-471 Len: 547 Check: 400 Weight: 1.00 Name: ENSP00000261721/1-482 Len: 547 Check: 8623 Weight: 1.00 Name: ENSTTRP00000004653/1-348 Len: 547 Check: 6202 Weight: 1.00 // 1 50 BACU016046/1-440 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028446/1-482 MASLGPAVTG EQVPGAEAEP GAAGPPP-PS TSSLGPLLPL KREPLYNWQA bmy_11596T0/1-471 ---------- --MERASSDE SQVQSPSEKD KEEAADPLSI QREPLYNWQA ENSP00000261721/1-482 MASLGPAAAG EQASGAEAEP GPAGPPPPPS PSSLGPLLPL QREPLYNWQA ENSTTRP00000004653/1-348 ---------- ---------- ---------- ---------- ---------- 51 100 BACU016046/1-440 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028446/1-482 TKASLKERFA FLFNSELLSD VRFVLGKGRG GGGAAGGPQR IPAHRFVLAA bmy_11596T0/1-471 TKASLKERFA FLFNSELLSD VRFVLGKGRG GAAAAGGPQR IPAHRFVLAA ENSP00000261721/1-482 TKASLKERFA FLFNSELLSD VRFVLGKGR- GAAAAGGPQR IPAHRFVLAA ENSTTRP00000004653/1-348 ---------- ---------- ---------- ---------- ---------- 101 150 BACU016046/1-440 -------MFN GGMATTSAEI ELPDVEPAAF LALLRFLYSD EVQIGPETVM ENSBTAP00000028446/1-482 GSAVFDAMFN GGMATTSAEI ELPDVEPAAF LALLRFLYSD EVQIGPETVM bmy_11596T0/1-471 GSAVFDAMFN GGMATTSAEI ELPDVEPAAF LALLRFLYSD EVQIGPETVM ENSP00000261721/1-482 GSAVFDAMFN GGMATTSAEI ELPDVEPAAF LALLRFLYSD EVQIGPETVM ENSTTRP00000004653/1-348 ---------- ---------- ---------- -----FLYSD EVQIGPETVM 151 200 BACU016046/1-440 TTLYTAKKYA VPALEAHCVE FLTKHLRADN AFMLLTQARL FDEPQLASLC ENSBTAP00000028446/1-482 TTLYTAKKYA VPALEAHCVE FLTKHLRADN AFMLLTQARL FDEPQLASLC bmy_11596T0/1-471 TTLYTAKKYA VPALEAHCVE FLTKHLRADN AFMLLTQARL FDEPQLASLC ENSP00000261721/1-482 TTLYTAKKYA VPALEAHCVE FLTKHLRADN AFMLLTQARL FDEPQLASLC ENSTTRP00000004653/1-348 TTLYTAKKYA VPALEAHCVE FLTKHLRADN AFMLLTQARL FDEPQLASLC 201 250 BACU016046/1-440 LDTIDKSTMD AISAEGFTDI DIDTLCAVLE RDTLSIRESR LFGAVVRWAE ENSBTAP00000028446/1-482 LDTIDKNTMD AISAEGFTDI DIDTLCAVLE RDTLSIRECR LFGAVVRWAE bmy_11596T0/1-471 LDTIDKSTMD AISAEGFTDI DIDTLCAVLE RDTLSIRESR LFGAVVRWAE ENSP00000261721/1-482 LDTIDKSTMD AISAEGFTDI DIDTLCAVLE RDTLSIRESR LFGAVVRWAE ENSTTRP00000004653/1-348 LDTIDKSTMD AISAEGFTDI DIDTLCAVLE RDTLSIRESR LFGAVVRWAE 251 300 BACU016046/1-440 AECQRQQLPV TFGNKQKVLG KALSLIRFPL MTIEEFAAGP AQSGILSDRE ENSBTAP00000028446/1-482 AECQRQQLPM TFGNKQKVLG KALALIRFPL MTIEEFAAGP AQSGILSDRE bmy_11596T0/1-471 AECQRQQLPV TFGNKQKVLG KALSLIRFPL MTIEEFAAGP AQSGILSDRE ENSP00000261721/1-482 AECQRQQLPV TFGNKQKVLG KALSLIRFPL MTIEEFAAGP AQSGILSDRE ENSTTRP00000004653/1-348 AECQRQQLPV TFGNKQKVLG KALSLIRFPL MTIEEFAAGP AQSGILSDRE 301 350 BACU016046/1-440 VVNLFLHFTV NPKPRVEYID RPRCCLRGKE CCINRFQQVE SRWGYSGTSD ENSBTAP00000028446/1-482 VVNLFLHFTV NPKPRVEYID RPRCCLRGKE CCINRFQQVE SRWGYSGTSD bmy_11596T0/1-471 VVNLFLHFTV NPKPRVEYID RPRCCLRGKE CCINRFQQVE SRWGYSGTSD ENSP00000261721/1-482 VVNLFLHFTV NPKPRVEYID RPRCCLRGKE CCINRFQQVE SRWGYSGTSD ENSTTRP00000004653/1-348 VVNLFLHFTV NPKPRVEYID RPRCCLRGKE CCINRFQQVE SRWGYSGTSD 351 400 BACU016046/1-440 RIRFTVNRRI SIVGFGLYGS IHGPTDYQVN IQIIEYEKKQ TLGQNDTGFS ENSBTAP00000028446/1-482 RIRFTVNRRI SIVGFGLYGS IHGPTDYQVN IQIIEYEKKQ TLGQNDTGFS bmy_11596T0/1-471 RIRFTVNRRI SIVGFGLYGS IHGPTDYQVN IQIIEYEKKQ TLGQNDTGFS ENSP00000261721/1-482 RIRFTVNRRI SIVGFGLYGS IHGPTDYQVN IQIIEYEKKQ TLGQNDTGFS ENSTTRP00000004653/1-348 RIRFTVNRRI SIVGFGLYGS IHGPTDYQVN IQIIEYEKKQ TLGQNDTGFS 401 450 BACU016046/1-440 CDGTANTFRV MFKEPIEILP NVCYTACATL KGKSQSKEAE RPVPPSGPVA ENSBTAP00000028446/1-482 CDGTANTFRV MFKEPIEILP NLCYMACATL KG-------- -PDSHYG--- bmy_11596T0/1-471 CDGTANTFRV MFKEPIEILP NVCYTACATL KG-------- -PDSHYG--- ENSP00000261721/1-482 CDGTANTFRV MFKEPIEILP NVCYTACATL KG-------- -PDSHYG--- ENSTTRP00000004653/1-348 CDGTANTFRV MFKEPIEILP NVCYTACATL KG-------- -PDSHYG--- 451 500 BACU016046/1-440 VDPKGCITIA IHAKPGSKQN AVTDLTAEAV SVAIAAPPTE GEANAELCWY ENSBTAP00000028446/1-482 --TKGLKKVV -HETPTA--- ------SKTV FFFFSSPGNN NGTSIE---- bmy_11596T0/1-471 --TKGLKKVV -HETPTA--- ------SKTV FFFFSSPGNN NGTSIE---- ENSP00000261721/1-482 --TKGLKKVV -HETPAA--- ------SKTV FFFFSSPGNN NGTSIE---- ENSTTRP00000004653/1-348 --TKGLKKVV -HETPAA--- ------SKTV FFFFSSPGNN NGTSIE---- 501 550 BACU016046/1-440 LSKVLELRKS DVVLDKGGKS REKVVKLLAS TTPEEILEKL KKQVEKK ENSBTAP00000028446/1-482 ---------- ------DGQI ---------- --PEIIFYT- ------- bmy_11596T0/1-471 ---------- ------DGQI ---------- --PEIIFYT- ------- ENSP00000261721/1-482 ---------- ------DGQI ---------- --PEIIFYT- ------- ENSTTRP00000004653/1-348 ---------- ------DGQI ---------- --PEIIFYT- -------