KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:08 2014 Check: 00 .. Name: BACU008239/1-231 Len: 266 Check: 2162 Weight: 1.00 Name: ENSP00000345848/1-251 Len: 266 Check: 7674 Weight: 1.00 Name: bmy_01806T0/1-189 Len: 266 Check: 7584 Weight: 1.00 Name: ENSTTRP00000010266/1-235 Len: 266 Check: 9579 Weight: 1.00 Name: ENSBTAP00000028486/1-154 Len: 266 Check: 3811 Weight: 1.00 // 1 50 BACU008239/1-231 MDMKRRIHLE LRNRTLA--- -----AVREL VLDNCKSNDG KIEGLTAEFV ENSP00000345848/1-251 MDMKRRIHLE LRNRTPA--- -----AVREL VLDNCKSNDG KIEGLTAEFV bmy_01806T0/1-189 MTLVKAEFYQ LREMSKSFSS PLCHPQVREL VLDNCKSNDG KIEGLTAEFV ENSTTRP00000010266/1-235 ---------- ---------- ------VREL VLDNCKSNDG KIEGLTAEFV ENSBTAP00000028486/1-154 ---------- ---------- ------VREL VLDNCKSNDG KIEGLTAEFV 51 100 BACU008239/1-231 NLEFLSLINV GLISVSNLPK LPKLKKLEPS DNRIFAGLDM LAEKLPNLTH ENSP00000345848/1-251 NLEFLSLINV GLISVSNLPK LPKLKKLELS ENRIFGGLDM LAEKLPNLTH bmy_01806T0/1-189 NLEFLSLINV GLISVSNLPK LPKLKKLELS DNRIFGGLDM LAEKLPNLTH ENSTTRP00000010266/1-235 NLEFLSLINV GLISVSNLPK LPKLKKLELS DNRIFGGLDM LAEKLPNLTH ENSBTAP00000028486/1-154 NLEFLSLINV GLISVSNLPK LPKLKKLELS DNRICGGLDM LAEKLPNLTH 101 150 BACU008239/1-231 LNLSGNKLKD ISTLKPSKKL ECPKSLDLFN CEVTNLNDYQ ESVFKLLPQL ENSP00000345848/1-251 LNLSGNKLKD ISTLEPLKKL ECLKSLDLFN CEVTNLNDYR ESVFKLLPQL bmy_01806T0/1-189 LNLSGNKLKD ISTLEPLKKL ECLKSLDLFN CEVTNLNDYR ESVFKLLPQL ENSTTRP00000010266/1-235 LNLSGNKLKD ISTLEPLKKL ECLKSLDLFN CEVTNLNDYR ESVFKLLPQL ENSBTAP00000028486/1-154 LNLSGNKLKD ISTLEPLKKL ECLKSLDLFN CEVTNLNDYR ESVFKLLPQL 151 200 BACU008239/1-231 TYLDGYDRED SETPDSDAE- --VDEECDDE ---------- ---------- ENSP00000345848/1-251 TYLDGYDRED QEAPDSDAEV DGVDEEEEDE EGEDEEDEDD EDGEEEEFD- bmy_01806T0/1-189 TYLDGYDRED REAPDSDAEV DGVDEDEDDE ---------- ---------- ENSTTRP00000010266/1-235 TYLDGYDRED REAPDSDAEV DGVDEEEDDE EGEDEDKEED EDGEEEEFDD ENSBTAP00000028486/1-154 TYLDGYDRED REAPDSDAEV DGVDEEEDDE ---------- ---------- 201 250 BACU008239/1-231 ---EYEDEDV EGE-DEDKVS GEEEECGHDG EADEDEDEDE DEEEEEEESG ENSP00000345848/1-251 -EEDDEDEDV EGDEDDDEVS EEEEEFGLDE -----EDEDE DEDEEEEEGG bmy_01806T0/1-189 ---------- -GEWAQSNVQ ---------- ---------- ---------- ENSTTRP00000010266/1-235 EEDEDEDEDV EGEEDEDEVS GEEEEFGHDG -----EDEDE DEDEEEEESG ENSBTAP00000028486/1-154 ---------- ---------- ---------- ---------- ---------- 251 300 BACU008239/1-231 KGEKRKRETD DEGEDD ENSP00000345848/1-251 KGEKRKRETD DEGEDD bmy_01806T0/1-189 ---------- ------ ENSTTRP00000010266/1-235 KGEKRKRETD DEGEDD ENSBTAP00000028486/1-154 ---------- ------