KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:11 2014 Check: 00 .. Name: ENSBTAP00000028520/1-249 Len: 282 Check: 6013 Weight: 1.00 Name: bmy_16976T0/1-237 Len: 282 Check: 3408 Weight: 1.00 Name: BACU008669/1-249 Len: 282 Check: 6429 Weight: 1.00 Name: ENSP00000372155/1-250 Len: 282 Check: 9196 Weight: 1.00 Name: ENSTTRP00000008171/1-248 Len: 282 Check: 5310 Weight: 1.00 // 1 50 ENSBTAP00000028520/1-249 MATLRVLPEA QAKVDVFRED LCTKTENLLG SYFPKKISEL DAFLKEPDLN bmy_16976T0/1-237 MTTLRVLPEA QAKVDVFRED LCTKTENLLG SYFPKKISEL DAFLK----- BACU008669/1-249 MTTLRVLPEA QAKVDVFRED LCTKTENLLG SYFPKKISEL DAFLKEPALN ENSP00000372155/1-250 MAMLRVQPEA QAKVDVFRED LCTKTENLLG SYFPKKISEL DAFLKEPALN ENSTTRP00000008171/1-248 MATLRVLPEA QAKVDVFRED LCAKTENLLG SYFPKKISEL DAFLKEPALN 51 100 ENSBTAP00000028520/1-249 EANLSNLKAP LDIPVPDPVK EKEKEERRKQ QEKEDKDEKK KGEDEDKGPP bmy_16976T0/1-237 ---------- ---------- ---------- --KEDKDEKK KGEDEDKGPP BACU008669/1-249 EANLSNLKAL LDIPVPDPVK EKEKEERKKQ QEKEDKDEKK KGEDEDKGPP ENSP00000372155/1-250 EANLSNLKAP LDIPVPDPVK EKEKEERKKQ QEKEDKDEKK KGEDEDKGPP ENSTTRP00000008171/1-248 EANLSNLKAP LDIPVPDPVK EKEKEERKKQ QEKEDKDEKK KGEDEDKGPP 101 150 ENSBTAP00000028520/1-249 CGPVSCNEKI VVLLQRVKPE IKDVIEKLNL VTTWLQLQIP RIEDGNNFGV bmy_16976T0/1-237 CGPVNCNEKI VLLLQRLKPE IKDVIEKLNL VTTWLQLQIP RIEDGNNFGV BACU008669/1-249 CGPVNCNEKI VVLLQRLKPE IKDVIENLNL VTTWLQLQIP RIEDGNNFGV ENSP00000372155/1-250 CGPVNCNEKI VVLLQRLKPE IKDVIEQLNL VTTWLQLQIP RIEDGNNFGV ENSTTRP00000008171/1-248 CGPVNCNEKI VVLLQRLKPE IKDVIEKLNL VTTWLQLQIP RIEDGNNFGV 151 200 ENSBTAP00000028520/1-249 AVQEKVFELM TALHTKLEGF HTQISKYFSE RGDAVTKAAK QPHV------ bmy_16976T0/1-237 AVQEKVFELM TTLHTKLEGF HTQISKYFSE RGDAVTKAAK QPHVVGEAQV BACU008669/1-249 AVQEKVFELM TTLHTKLEGF HTQISKYFSE RGDAVTKAAK QPHV------ ENSP00000372155/1-250 AVQEKVFELM TSLHTKLEGF HTQISKYFSE RGDAVTKAAK QPHV------ ENSTTRP00000008171/1-248 AVQEKVFELM TTLHTKLEGF HTQISKYFSE RGDAVTKAAK QPHV------ 201 250 ENSBTAP00000028520/1-249 ---------- ---------G DYRQLVHELD EAEYRDIRLM VMEIRNAYA- bmy_16976T0/1-237 RVHGRRDTFE VRXDPSLPQG DYRQLVHELD EAEYRDIRLM VMEIRNAYA- BACU008669/1-249 ---------- ---------G DYRQLVHELD EAEYRDIRLM VMEIRNAYA- ENSP00000372155/1-250 ---------- ---------G DYRQLVHELD EAEYRDIRLM VMEIRNAYVR ENSTTRP00000008171/1-248 ---------- ---------G DYRQLVHELD EAEYWDIRLM VMEIRNAYVR 251 300 ENSBTAP00000028520/1-249 -------VLY DIILKNFEKL KKPRGETKGM IY bmy_16976T0/1-237 -------VLY DIILKNFEKL KKPRGETKGM IY BACU008669/1-249 -------VLY DIILKNFEKL KKPRGETKGM IY ENSP00000372155/1-250 RQGQGRGGQR QLSQATHSLT LQARG----- -- ENSTTRP00000008171/1-248 RRGQ---GQR QLSQATHSLT LRAGGE---- --