KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:12 2014 Check: 00 .. Name: BACU012414/1-229 Len: 368 Check: 6536 Weight: 1.00 Name: ENSP00000342828/1-364 Len: 368 Check: 3061 Weight: 1.00 Name: ENSBTAP00000028522/1-367 Len: 368 Check: 6309 Weight: 1.00 Name: bmy_10554T0/1-362 Len: 368 Check: 8625 Weight: 1.00 Name: ENSTTRP00000002033/1-365 Len: 368 Check: 2637 Weight: 1.00 // 1 50 BACU012414/1-229 ---------- ---------- ---------- ---------- ------MLAA ENSP00000342828/1-364 MMLPSPVTST PFSVKDILNL E-QQHQHFHG AHLQADLEHH FHSAPCMLAA ENSBTAP00000028522/1-367 MMLPSPVTST PFSVKDILNL EQQQQQHFHG AHLQADLEHH FHSAPCMLAA bmy_10554T0/1-362 MMLPSPVTST PFSVKDILNL EQQQQQHFHG AHLQADLEHH FHSAPCMLAA ENSTTRP00000002033/1-365 MMLPSPVTST PFSVKDILNL EQQQQQQFHG AHLQADLEHH FHSAPCMLAA 51 100 BACU012414/1-229 AEGTQFSDGG EEDEEEEGEK LSYLNSLATA DGHGDSGLCP QSYVHTVLRD ENSP00000342828/1-364 AEGTQFSDGG EEDEEDEGEK LSYLNSLAAA DGHGDSGLCP QGYVHTVLRD ENSBTAP00000028522/1-367 AEGTQFSDGG EEDEEEEGEK LSYLNSLATA DGHGDSGLCP QSFVHTVLRD bmy_10554T0/1-362 AEGTQFSDGG EEDEEEEGEK LSYLNSLATA DGHGDSGLCP QSYVHTVLRD ENSTTRP00000002033/1-365 AEGTQFSDGG EEDEEEEGEK LSYLNSLATA DGHGDSGLCP QSYVHTVLRD 101 150 BACU012414/1-229 SCSGPKEHEE EPEVLRDRSQ KSCQLKKPLE AAGDCKAAEE SERPKPRSRR ENSP00000342828/1-364 SCSEPKEHEE EPEVVRDRSQ KSCQLKKSLE TAGDCKAAEE SERPKPRSRR ENSBTAP00000028522/1-367 SCSGPKEHEE EPEVVRDGNQ KSCQLKKPLE AAGDCKAAEE SERPKPRSRR bmy_10554T0/1-362 SCSGPKEQEE EPEVLRDRSQ KSCQLKKPLE AAGDCKAAEE SERPKPRSRR ENSTTRP00000002033/1-365 SCSGPKEHEE EPEVLRDRSQ KSCQLKKPLE AAGDCKAAEE SERPKPRSRR 151 200 BACU012414/1-229 KPRVLFSQAQ VFELERRFKQ QRYLSAPERE HLASSLKLTS TQVKIWFQNR ENSP00000342828/1-364 KPRVLFSQAQ VFELERRFKQ QRYLSAPERE HLASSLKLTS TQVKIWFQNR ENSBTAP00000028522/1-367 KPRVLFSQAQ VFELERRFKQ QRYLSAPERE HLASSLKLTS TQVKIWFQNR bmy_10554T0/1-362 KPRVLFSQAQ VFELERRFKQ QRYLSAPERE HLASSLKLTS TQVKIWFQNR ENSTTRP00000002033/1-365 KPRVLFSQAQ VFELERRFKQ QRYLSAPERE HLASSLKLTS TQVKIWFQNR 201 250 BACU012414/1-229 ---------- ---------- ---------- ---------- ---------- ENSP00000342828/1-364 RYKCKRQRQD KSLELGAHAP PPPPRRVAVP VLVRDGKPCV TPSAQAYGAP ENSBTAP00000028522/1-367 RYKCKRQRQD KSLELGGHAP PPPPRRVAVP VLVRDGKPCV TPGAPAYGAP bmy_10554T0/1-362 RYKCKRQRQD KSLELGAHAP PPPPRRVAVP VLVRDGKPCV TPSAPAYGAP ENSTTRP00000002033/1-365 RYKCKRQRQD KSLELGAHAP PPPPRRVAVP VLVRDGKPCV TPSAPAYGAP 251 300 BACU012414/1-229 ---------- -SLP------ ---------- -AAAAKRWRT TQGQKKHE-- ENSP00000342828/1-364 YSVGASAYSY NSFPAYGYGN SAAAAAAAAA AAAAAAAYSS SYGCAYPA-- ENSBTAP00000028522/1-367 YSVGAGAYSY NSFPAYGYGN SAAAAAAAAA AAAAAAAYSG SYGCAYPASG bmy_10554T0/1-362 YSVGAGAYSY NSFPAYGYGN SAAAAAAAAA AAAAAAAYSG SYGCAYPA-- ENSTTRP00000002033/1-365 YSVGAGAYSY NSFPAYGYGN SAAAAAAAAA AAAAAAAYSG SYGCAYPA-- 301 350 BACU012414/1-229 -GEKNGRRGL RNPQALPTLC PLCGAG---- VPQHSPF--- -----SFSQP ENSP00000342828/1-364 GGGGGGGGTS AATTAMQPAC SAAGGGPFVN VSNLGGF-GS GGSAQPLHQG ENSBTAP00000028522/1-367 GSGGGGGGAS SAASAMQPAC SASGGGPFVN VSNLAGF-GG GGGAQPLHQG bmy_10554T0/1-362 -SGGGGGGAS AAASAMQPAC SAAGGGPFVN VSNLGGF--- GGGAQPLHQG ENSTTRP00000002033/1-365 -SGGGGGGAS AAASAMQPAC SAAGGGPFVN VSNLGGFGGG GGGAQPLHQG 351 400 BACU012414/1-229 PAFRTRYLGL DLQIVRGV ENSP00000342828/1-364 TAAGAACAQG TLQGIRAW ENSBTAP00000028522/1-367 ATAGAACAQG TLQGIRAW bmy_10554T0/1-362 AAAGAACAQG TLQGIRAW ENSTTRP00000002033/1-365 AAAGAACTQG TLQGIRAW