KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:36:14 2014 Check: 00 .. Name: ENSP00000164640/1-769 Len: 783 Check: 6392 Weight: 1.00 Name: ENSBTAP00000028557/1-762 Len: 783 Check: 677 Weight: 1.00 Name: bmy_18755T0/1-763 Len: 783 Check: 6510 Weight: 1.00 Name: ENSTTRP00000002981/1-756 Len: 783 Check: 7449 Weight: 1.00 // 1 50 ENSP00000164640/1-769 MGCNMCVVQK PEEQYKVMLQ VNGKELSKLS QEQTLQALRS SKEPLVIQVL ENSBTAP00000028557/1-762 ---------- ---------Q VNGKELSKLS QEQTLEALRA SKEPLVIQVL bmy_18755T0/1-763 ---------- -----MSLLQ VNGKELSKLS QEQTLEALRA SKEPLVIQVL ENSTTRP00000002981/1-756 ---------- ---------- VNGKELSKLS QEQTLEALRA SKEPLVIQVL 51 100 ENSP00000164640/1-769 RRSPRLRGDS SCHDLQLVDS GTQTDITFEH IMALGKLRPP TPPMVILEP- ENSBTAP00000028557/1-762 RRSPRLRGDG SCHDLQLVDS GTQTDITFEH IMALGKLRPP TPPMVILEPF bmy_18755T0/1-763 RRSPRLRGDG SSHDLQLVDS GTQTDITFEH IMALGKLRPP TPPMVILEPY ENSTTRP00000002981/1-756 RRSPRLRGDG SSHDLQLVDS GTQTDITFEH IMALGKLRPP TPPMVILEPY 101 150 ENSP00000164640/1-769 -----PPISH EYYDPAEFME GGPQEADRLD ELEYEEVELY KSSHRDKLGL ENSBTAP00000028557/1-762 VPSELPPISH EYYDPAEFME GGPQEADRMD ELEYEEVELY KSSHRDKLGL bmy_18755T0/1-763 VPSELPPISH EYYDPAEFME GGPQEADRMD ELEYEEVELY KTSHRDKLGL ENSTTRP00000002981/1-756 VPSELPPISH EYYDPAEFME GSPQEADHME ELEYEEVELY KTSHRDKLGL 151 200 ENSP00000164640/1-769 MVCYRTDDEE DLGIYVGEVN PNSIAAKDGR IREGDRIIQI NGVDVQNREE ENSBTAP00000028557/1-762 MVCYRTDEEE DLGIYVGEVN PNSIAAKDGR IREGDRIIQI NGMDVQNREE bmy_18755T0/1-763 MVCYRTDDEE DLGIYVGEVN PNSIAAKDGR IREGDRIIQI NGVDVQNREE ENSTTRP00000002981/1-756 MVCYRTDDEE DLGIYVGEVN PNSIAAKDGR IREGDRIIQI NGVDVQNREE 201 250 ENSP00000164640/1-769 AVAILSQEEN TNISLLVARP ESQLAKRWKD SDRDDFLDDF GSENEGELRA ENSBTAP00000028557/1-762 AVAILSQEEN TNISLLVARP ESQLAKRWKD SDRDDFLDDF GSENEDDLRV bmy_18755T0/1-763 AVAILSQEEN TNISLLVARP ESQLAKRWKD SDRDDFLDDC GSENEGDLRA ENSTTRP00000002981/1-756 AVAILSQEEN TNISLLVARP ESQLAKRWKD SDRDDFLDDF GSENEGDLRA 251 300 ENSP00000164640/1-769 RKLKSPPAQ- -QPGNEEEKG APDAGPGLSN SQELDSGVGR TDESTRNEES ENSBTAP00000028557/1-762 RKLKSPPAQ- -QLGHEEEKG APEAGPGLHN SQELDSGVGR TDESTRNEES bmy_18755T0/1-763 RKLKSPPAQQ LQLGNEEEKG APDAGPGLSN SQELDSGVGR TDESTRNEES ENSTTRP00000002981/1-756 RKLKSPPAQ- -QLGNEEEKG APDAGPGLSN SQELDSGVGR TDESTRNEES 301 350 ENSP00000164640/1-769 SEHDLLGDEP PSSTNTPGSL RKFGLQGDAL QSRDFHFSMD SLLAEGAGLG ENSBTAP00000028557/1-762 SEHDLLGDEP LSTANTPGPL RKFGLQGDAL QSRDFHFSMD SLLAEGAGLG bmy_18755T0/1-763 SEHDLLGDEP LSTANTPGPL RKFGLQGDAL QSRDFHFSMD SLLAEGAGLG ENSTTRP00000002981/1-756 SEHDLLGDEP LSTANTPGPL RKFGLQGDAL QSRDFHFSMD SLLAEGAGLG 351 400 ENSP00000164640/1-769 GGDVPGLTDE EYERYRELLE IKCHLENGNQ LGLLFPRASG GNSALDVNRN ENSBTAP00000028557/1-762 GGDVPGLTDE EYERYRELLE IKCHLENGNP LGLPFPRAAA SHGALDVNRN bmy_18755T0/1-763 GGDVPGLTDE EYERYRELLE IKCHLENGNP LGLLFPRAAG GNGALDVNRN ENSTTRP00000002981/1-756 GGEVPGLTDE EYERYRELLE IKCHLENGNP LGLLFPRAAG GSGALDVNRN 401 450 ENSP00000164640/1-769 ESLGHEMAML EEELRHLEFK CRNILRAQKM QQLRERCMKA WLLEEESLYD ENSBTAP00000028557/1-762 ESAGHELAVL EEELRHLEFK CRNILRAQKM QQLRERCMKA WLLEEESLYD bmy_18755T0/1-763 ESVGHEMAVL EEELRHLEFK CRNILRAQKM QQLRERCMKA WLLEEESLYD ENSTTRP00000002981/1-756 ESVGHEMAVL EEELRHLEFK CRNILRAQKM QQLRERCMKA WLLEEESLYD 451 500 ENSP00000164640/1-769 LAASEPKKHE LSDISELPEK SDKDSTSAYN TGESCRSTPL LVEPLPESPL ENSBTAP00000028557/1-762 LAASEPKKHE LSDISELPEK SDKDSTSAYN TGESCRSTPL LAEPLPESPL bmy_18755T0/1-763 LGAGEPKKHE LSDISELPEK SDKDSTSAYN TGESCRSTPL LAEPLPESPL ENSTTRP00000002981/1-756 LGAGEPKKHE LSDISELPEK SDKDSTSAYN TGESCRSTPL LAEPLPESPL 501 550 ENSP00000164640/1-769 RR--AMAGNS NLNRTPPGPA VATPAKAA-- PPPGSPAKFR SLSRDPEAGR ENSBTAP00000028557/1-762 RRVAAAAGNS NLNRTPTGAP GAAQPKATAP PPPGSPAKFR SLSRDPDVGR bmy_18755T0/1-763 RR-ATAGGNS NLNRTPSGHP VAAHPKAA-- PPQGSPAKFR SLSRDPEVGR ENSTTRP00000002981/1-756 RR-ATAGGNS NLNRTPSAPP VAAHPKAA-- PPQGGPANFR SLSRDPEVGR 551 600 ENSP00000164640/1-769 RQHA-EERGR RNPKTGLTLE RVGPESSPYL SRRHRGQGQE GEHYHSCVQL ENSBTAP00000028557/1-762 RQHSAEERVR HGPKTGVALE HVGPEGSPYL SRHHRGPGQE GEHYHSCLQL bmy_18755T0/1-763 RQRS-EERVR RGPKTGVTLE RVGPEGSPYL SRRHRGQGQE GERYHSCVQL ENSTTRP00000002981/1-756 RQHS-GERVR RGPKTGVTLE RVGPEGSPYL SRRHRIQGQE GDHYHSCMQL 601 650 ENSP00000164640/1-769 APTRGLEELG HGPLSLAGGP RVGG-VAAAA TEAPRMEWKV KVRSDGTRYV ENSBTAP00000028557/1-762 AAPRGLEDLG PGPLSVAAGP RVGGGAAAVG PEAPRMEWKV KVRSDGTRYV bmy_18755T0/1-763 APPRGLEELG HGALSLASGP RVGGAAAAAA TEAPRMEWKV KVRSDGTRYV ENSTTRP00000002981/1-756 APPRGLEELG RSPLSLASGP RVGG-VAAAA TDAPRMEWKV KVRSDGTRYV 651 700 ENSP00000164640/1-769 AKRPVRDRLL KARALKIREE RSGMTTDDDA VSEMKMGRYW SKEERKQHLI ENSBTAP00000028557/1-762 AKRPVRDRLL KARALKIREE RSGMTTDDDA VSEMKMGRYW SKEERKQHLI bmy_18755T0/1-763 AKRPVRDRLL KARALKIREE RSGMTTDDDA VSEMKMGRYW SKEERKQHLL ENSTTRP00000002981/1-756 AKRPVRDRLL KARALKIREE RSGMTTDDDA VSEMKMGRYW SKEQRKQHLI 701 750 ENSP00000164640/1-769 RAREQRKRRE FMMQSRLECL REQQNGDSKP ELNIIALSHR KTMKKRNKKI ENSBTAP00000028557/1-762 RAREQRKRRE FMMQSRLECL REQQNGDSKA ELNIIALSHR KTMKKRNKKI bmy_18755T0/1-763 RAREQRRRRE FMLQSRLECL REQS-GDSRA ELNIIALSHR KTMKKRSKKI ENSTTRP00000002981/1-756 RAREQRKRRE FMMQSRLECL REQQSGDSKA ELNIIALSHR KTMKKRSKKI 751 800 ENSP00000164640/1-769 LDNWITIQEM LAHGARSADG KRVYNPLLSV TTV ENSBTAP00000028557/1-762 LDNWITIQEM LAHGTRSADG KRVYNPLLSV TTV bmy_18755T0/1-763 LDNWITIQEM LAHGTRSADG KRVYNPLLSV TTV ENSTTRP00000002981/1-756 LDNWITIQEM LAHGTRSADG KRVYNPLLSV TTV