KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:17 2014 Check: 00 .. Name: BACU013359/1-202 Len: 212 Check: 4018 Weight: 1.00 Name: ENSP00000345393/1-164 Len: 212 Check: 5330 Weight: 1.00 Name: bmy_01124T0/1-160 Len: 212 Check: 3466 Weight: 1.00 Name: ENSTTRP00000005302/1-161 Len: 212 Check: 3846 Weight: 1.00 Name: ENSBTAP00000028574/1-172 Len: 212 Check: 2132 Weight: 1.00 // 1 50 BACU013359/1-202 ----MRPTCC PQIKRELSEN TPHLSDEALM GLSVRELNRH LRGLSAEEVT ENSP00000345393/1-164 MSVDPLSSKA LKIKRELSEN TPHLSDEALM GLSVRELNRH LRGLSAEEVT bmy_01124T0/1-160 ----MRPTCC PQIKRELSEN TPHLSDEALM GLSVRELNRH LRGLSAEEVT ENSTTRP00000005302/1-161 MSVDPLSSKA LKIKRELSEN TPHLSDEALM GLSVRELNRH LRGLSAEEVT ENSBTAP00000028574/1-172 MSVDPLSSKA LKIKRELSEN TPHLSDEALM GLSVRELNRH LRGLSAEEVT 51 100 BACU013359/1-202 RLKQRRRTLK NRGYAASCRV KRVCQKEELQ KQKSELEREV DKLARENAAM ENSP00000345393/1-164 RLKQRRRTLK NRGYAASCRV KRVCQKEELQ KQKSELEREV DKLARENAAM bmy_01124T0/1-160 RLKQRRRTLK NRGYAASCRV KRVCQKEELQ KQKSELEREV DKLARENAAM ENSTTRP00000005302/1-161 RLKQRRRTLK NRGYAASCRV KRVCQKEELQ KQKSELEREV DKLARENAAM ENSBTAP00000028574/1-172 RLKQRRRTLK NRGYAASCRV KRVCQKEELQ KQKSELEREV DKLARENAAM 101 150 BACU013359/1-202 RLELDALRGK CEALQGFARS VAXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000345393/1-164 RLELDALRGK CEALQGFARS VAAARGPATL VA-------- ---------- bmy_01124T0/1-160 RLELDALRGK CEALQGFARS VAAARGPAAL VA-------- ---------- ENSTTRP00000005302/1-161 RLELDALRGK CEALQGFARS VAAAHGPAAM VA-------- ---------- ENSBTAP00000028574/1-172 RLELDALRGK CEALQGFARS VAAARGPAAL VA-------- ---------- 151 200 BACU013359/1-202 XXXXXXXXXX XXXXXXXXXR PRPRRLLLVA AEPRSLRPRP ------FSKP ENSP00000345393/1-164 ---------- ---------- --PASVITIV KSTPGSGSGP --------AH bmy_01124T0/1-160 ---------- ---------- --PASVITIV KSAPSPGPAP --------GP ENSTTRP00000005302/1-161 ---------- ---------- --PASVITIV KSAPSPGPAP --------GP ENSBTAP00000028574/1-172 ---------- ---------- --PASVITIV KSAPSPGPGP APGPGPASGP 201 250 BACU013359/1-202 QPLRPQLPSL SA ENSP00000345393/1-164 GPDPAHGPAS CS bmy_01124T0/1-160 GPAPGPAPAA CS ENSTTRP00000005302/1-161 GPAPGPAAS- -- ENSBTAP00000028574/1-172 GPAPGPAPAA CS