KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:18 2014 Check: 00 .. Name: ENSBTAP00000028594/1-449 Len: 607 Check: 6426 Weight: 1.00 Name: ENSTTRP00000014140/1-578 Len: 607 Check: 5816 Weight: 1.00 Name: ENSP00000297579/1-597 Len: 607 Check: 699 Weight: 1.00 Name: bmy_00487T0/1-451 Len: 607 Check: 9399 Weight: 1.00 Name: BACU004811/1-384 Len: 607 Check: 3507 Weight: 1.00 // 1 50 ENSBTAP00000028594/1-449 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014140/1-578 MQWPPPWRRS PRWSTSPLPE PARGVTRGRG M-KPRDPGAR GTEVRCRRHA ENSP00000297579/1-597 MQWPPPWRRS PLVSATPPPG PTRGLLCPRR VSEAGDSSTE GARTGHRHYV bmy_00487T0/1-451 ---------- ---------- ---------- ---------- ---------- BACU004811/1-384 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000028594/1-449 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014140/1-578 YPEES--EKG AGPPPSSRPA SPTLA-AEGR GWENTTEAPP PANLCPQNYG ENSP00000297579/1-597 TPAESAMEGR SQPLPSLRPA SPTNAPAHGR GSDCTAKEPP LANVCRQNYG bmy_00487T0/1-451 ---------- ---------- ---------- ---------- ---------- BACU004811/1-384 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000028594/1-449 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014140/1-578 APQGPAKP-D FRSVSHVTGS SLEEAEVVCG RRRRQQQLEG EGSWSREELS ENSP00000297579/1-597 AAQDPVEPAG RRSASHVTGS SLGKAEVACG RRWRWAELLA DTSWSPAGRA bmy_00487T0/1-451 ---------- ---------- ---------- ---------- ---------- BACU004811/1-384 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000028594/1-449 --MKVKMLSR NPDHYVRETK LDLQRVPRNY DPTLHPFEVP REYIRALNAT ENSTTRP00000014140/1-578 K-MKVKMLSR NPDSYVRETK LDLQRVPRNY DPTLHPFEVP REYVRXXXXX ENSP00000297579/1-597 TEMKVKMLSR NPDNYVRETK LDLQRVPRNY DPALHPFEVP REYIRALNAT bmy_00487T0/1-451 --MKVKMLSR NPDSYVRETK LDLQRVPRNY DPTLHPFEVP REYVRALNAT BACU004811/1-384 --MKVKMLSR NPDSYVRETK LDLQR----- ---------- ---------- 201 250 ENSBTAP00000028594/1-449 KLERVFAKPF LASLDGHRDG VNCLAKNPKS LATVLSGACD GE------VK ENSTTRP00000014140/1-578 XX-------- -----XXXDG VSCLAKHPKS LATVLSGACD GE------VR ENSP00000297579/1-597 KLERVFAKPF LASLDGHRDG VNCLAKHPEK LATVLSGACD GE------VR bmy_00487T0/1-451 KLERVFAKPF LASLDGHRDG VSCLAKHPKS LATVLSGACD GEASVTVNVR BACU004811/1-384 ---------- -----GHK-- ---------- --AVL----- --------VR 251 300 ENSBTAP00000028594/1-449 IWNLTKRKCI RTIQAHEGFV RGICTRFCGT SFFTVGDDKT VKQWKMDGPS ENSTTRP00000014140/1-578 IWNLTKRKCI RVIQAHEGFV RGICTRFCGT SFFTVGDDKT VKQWKMDGPS ENSP00000297579/1-597 IWNLTQRNCI RTIQAHEGFV RGICTRFCGT SFFTVGDDKT VKQWKMDGPG bmy_00487T0/1-451 IWNLTKRKCI HMIQAHEGFV RGICTRFCGT SFFTVGDDKT VKQWKMDGPS BACU004811/1-384 IWNLTKRKCI HMIQAHEGFV RGICTRFCGT SFFTVGDDKT VKQWKMDGPS 301 350 ENSBTAP00000028594/1-449 CGEEEEPLHT ILGKTVYTGI DHHWREAVFA TCGQQVDIWD EQRTSPICSM ENSTTRP00000014140/1-578 YGEEEEPLHT ILGKTVYTGI DHHWKEAVFA TCGQQVDIWD EQRTSPICSM ENSP00000297579/1-597 YGDEEEPLHT ILGKTVYTGI DHHWKEAVFA TCGQQVDIWD EQRTNPICSM bmy_00487T0/1-451 YGEEEEPLHT ILGKTVYTGI DHHWKEAVFA TCGQQVDIWD EQRSSPICSM BACU004811/1-384 FGEEEEPLHT ILGKTVYTGI DHHWKEAVFA TCGQQVDIWD EQRSSPICSM 351 400 ENSBTAP00000028594/1-449 TWGFDSISSV KFNPIETFLL GSCASDRNIV LYDMRQATPL KKVILDMRTN ENSTTRP00000014140/1-578 TWGFDSISSV KFNPIETFLL GSCASDRNIV LYDMRQATPL KKVILDMRTN ENSP00000297579/1-597 TWGFDSISSV KFNPIETFLL GSCASDRNIV LYDMRQATPL KKVILDMRTN bmy_00487T0/1-451 TWGFDSISSV KFNPIETFLL GSCASDRNIV LYDMRQATPL KKVILDMRTN BACU004811/1-384 TWGFDSISSV KFNPIETFLL GSCASDRNIV LYDMRQATPL KKVILDMRTN 401 450 ENSBTAP00000028594/1-449 TICWNPMEAF IFTAANEDYK NLTSVISMTL IDNPVLFHFK HCSSSCQIKY ENSTTRP00000014140/1-578 TICWNPMEAF IFTAANEDYN LYT--FDMRA LDTPVMIHMD HVSAVLDVDY ENSP00000297579/1-597 TICWNPMEAF IFTAANEDYN LYT--FDMRA LDTPVMVHMD HVSAVLDVDY bmy_00487T0/1-451 TICWNPMEAF IFTAANEDYN LYT--FDMRA LDTPVMVHMD HVSAVLDVDY BACU004811/1-384 TICWNPMEAF IFTAANEDYN LYT--FDMRA LDTPVMVHMD HVSAVLDVDY 451 500 ENSBTAP00000028594/1-449 QNVSRAFSNF DMYVSFKHIP KDSQRRERYN YHTKKHQRVS LLGFALNMHK ENSTTRP00000014140/1-578 SPTGKDFVSA SFDKSIRIFP VD-KSRSREV YHTKRMQHVI CVKWTSDSKY ENSP00000297579/1-597 SPTGKEFVSA SFDKSIRIFP VD-KSRSREV YHTKRMQHVI CVKWTSDSKY bmy_00487T0/1-451 SPTGKDFVSA SFDKSIRIFP VD-KSRSREV YHTKRMQHVI CVKWTSDSKY BACU004811/1-384 SPTGKDFVSA SFDKSIRIFP VD-KSRSREV YHTKRMQHVI CVKWTSDSKY 501 550 ENSBTAP00000028594/1-449 MLCKSQHTNI RGCILQELIF KVGKNSNAVK KLPQYNNTIK HSKRFCPKMQ ENSTTRP00000014140/1-578 IMCGSDEMNI R-LWKANASE KLGVXXXXXX XXXXXXXXXX XXXXXXXXXK ENSP00000297579/1-597 IMCGSDEMNI R-LWKANASE KLGVLTSREK AAKDYNQKLK EKFQHYPHIK bmy_00487T0/1-451 IMCGSDEMNI R-LWKANASE KLGVLTSREK AATDYNQRLK EKFQHHPHIK BACU004811/1-384 IMCGSDEMNI R-LWKANASE KLGVLTSREK AATDYNQRLK EKFQHHPHIK 551 600 ENSBTAP00000028594/1-449 KVAAHITTPE CESHHIHKTK ASKLTKVSRE LNRIKHSKPG SVQMVSEKKK ENSTTRP00000014140/1-578 RISRHRHLPK SIYSQIQEQR IMKEARRRKE LNRIKHSKPG SVQRVSEKKK ENSP00000297579/1-597 RIARHRHLPK SIYSQIQEQR IMKEARRRKE VNRIKHSKPG SVPLVSEKKK bmy_00487T0/1-451 RISRHRHLPK SIYSQIQEQR VMKEARRRKE LNRIKHSKPG SVQRVSEKKK BACU004811/1-384 RISRHRHLPK SIYSQIQEQR VMKEARRRKE LNRIKHSKPG SVQRVSEKKK 601 650 ENSBTAP00000028594/1-449 HVVAVVK ENSTTRP00000014140/1-578 RVVAVVK ENSP00000297579/1-597 HVVAVVK bmy_00487T0/1-451 RVVAVVK BACU004811/1-384 RVVAVVK