KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:19 2014 Check: 00 .. Name: ENSTTRP00000016054/1-443 Len: 559 Check: 9460 Weight: 1.00 Name: ENSP00000309953/1-443 Len: 559 Check: 2282 Weight: 1.00 Name: ENSBTAP00000028604/1-443 Len: 559 Check: 1834 Weight: 1.00 Name: BACU018487/1-465 Len: 559 Check: 3771 Weight: 1.00 Name: bmy_10237T0/1-500 Len: 559 Check: 1146 Weight: 1.00 // 1 50 ENSTTRP00000016054/1-443 ---------- ---------- ---------- ---MLPFASC LPASLLLWAL ENSP00000309953/1-443 ---------- ---------- ---------- ---MLPCASC LPGSLLLWAL ENSBTAP00000028604/1-443 ---------- ---------- ---------- ---MLPFASC LPGSLLLWAL BACU018487/1-465 ---------- ---------- ---------- ---------- ---------- bmy_10237T0/1-500 GGGRGHGSES WYRECGLLWQ RRPDPRPPSP SPRMLPFASC LPASLLLWAL 51 100 ENSTTRP00000016054/1-443 LLLLLGAASP QDSEEPNSYT ECTDGYEWDP DSQHCRDVNE CLTIPEACKG ENSP00000309953/1-443 LLLLLGSASP QDSEEPDSYT ECTDGYEWDP DSQHCRDVNE CLTIPEACKG ENSBTAP00000028604/1-443 LLLVLGAASP QDSEEPDSYT ECTDGYEWDP DSQHCRDVNE CLTIPEACKG BACU018487/1-465 ---------- ---------- ECTDGCEWDP DSQHCRDVNE CLTIPEACKG bmy_10237T0/1-500 LLLLLGAASP QDSEEPDSYT ECTDGYEWDP DSQHCRDVNE CLTIPEACKG 101 150 ENSTTRP00000016054/1-443 EMKCINHYGG YLCLPRSAAV ISDLHGEGPP PPVPPAEHPN PCLPGYEPDE ENSP00000309953/1-443 EMKCINHYGG YLCLPRSAAV INDLHGEGPP PPVPPAQHPN PCPPGYEPDD ENSBTAP00000028604/1-443 EMKCINHYGG YLCLPRSAAV INDLHGEGPP PPVPPAEHPH PCLPGYEPDE BACU018487/1-465 EMKCINHYGG YLCLPRSAAV INDLHGEGPP PPVPPAEHPN PCFPGYEPDE bmy_10237T0/1-500 EMKCINHYGG YLCLPRSAAV INDLHGEGPP PPVPPAEHPN PCLPGYEPDE 151 200 ENSTTRP00000016054/1-443 QESCT----- ---------- ---------- ---------- ---------- ENSP00000309953/1-443 QDSCV----- ---------- ---------- ---------- ---------- ENSBTAP00000028604/1-443 QERCV----- ---------- ---------- ---------- ---------- BACU018487/1-465 QESCTGGPGS CYTAQPASGT LTLTAADVLQ ELCLSASAPA PSWSAPHPWV bmy_10237T0/1-500 QESCT----- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000016054/1-443 ---------- ----DVDECA QALHDCRPSQ ECHNLPGSYQ CTCPDGYRKI ENSP00000309953/1-443 ---------- ----DVDECA QALHDCRPSQ DCHNLPGSYQ CTCPDGYRKI ENSBTAP00000028604/1-443 ---------- ----DVDECA QALHDCRPSQ ECHNLPGSYQ CTCPDGYRKI BACU018487/1-465 PRALEEGPGI CAPGNVDECA QALHDCRPSQ ECHNLPGSYQ CTCPDGYRKI bmy_10237T0/1-500 ---------- ----DVDECA QALHDCRPSQ ECHNLPGSYQ CTCPDGYRKI 251 300 ENSTTRP00000016054/1-443 GPECVDIDEC RYRYCQHRCV NLPGSFRCQC EPGFQLGPNN RSCVDVNECD ENSP00000309953/1-443 GPECVDIDEC RYRYCQHRCV NLPGSFRCQC EPGFQLGPNN RSCVDVNECD ENSBTAP00000028604/1-443 GPECVDIDEC RYRYCQHRCV NLPGSFRCQC EPGFQLGPNN RSCVDVNECD BACU018487/1-465 GPECVDIDEC RYRYCQHRCV NLPGSFRCQC EPGFQLGPNN RSCVDVNECD bmy_10237T0/1-500 GPECVDIDEC RYRYCQHRCV NLPGSFRCQC EPGFQLGPNN RSCVDVNECD 301 350 ENSTTRP00000016054/1-443 MGAPCEQRCF NSYGTFLCRC HQGYELHRDG FSCS------ ---------- ENSP00000309953/1-443 MGAPCEQRCF NSYGTFLCRC HQGYELHRDG FSCS------ ---------- ENSBTAP00000028604/1-443 MGAPCEQRCF NSYGTFLCRC HQGYELHRDG FSCS------ ---------- BACU018487/1-465 MGAPCEQRCF NSYGTFLCRC HQGYELHRDG FSCS------ ---------- bmy_10237T0/1-500 MGAPCEQRCF NSYGTFLCRC HQGYELHRDG FSCSGSVDEM SMCGAELEDC 351 400 ENSTTRP00000016054/1-443 --------XX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXI ENSP00000309953/1-443 --------DI DECSYSSYLC QYRCINEPGR FSCHCPQGYQ LLATRLCQDI ENSBTAP00000028604/1-443 --------DI DECSYSSYLC QYRCVNEPGR FSCHCPQGYQ LLATRLCQDI BACU018487/1-465 --------DI DECSYSSYLC QYRCVNEPGR FSCHCPQGYQ LLATRLCQDI bmy_10237T0/1-500 RSPVLSPPDI DECSYSSYLC QYRCVNEPGR FSCHCPQGYQ LLATRLCQDI 401 450 ENSTTRP00000016054/1-443 DECESGAHQC SEAQTCVNFH GGYRCVDTNR CVEPYVQVSD NRCLCPASNP ENSP00000309953/1-443 DECESGAHQC SEAQTCVNFH GGYRCVDTNR CVEPYIQVSE NRCLCPASNP ENSBTAP00000028604/1-443 DECESGAHQC SEAQTCVNFH GGYRCVDTNR CVEPYVQVSD NRCLCPASNP BACU018487/1-465 DECESGAHQC SEAQTCVNFH GGYRCVDTNR CVEPYVQVSD NRCLCPASNP bmy_10237T0/1-500 DECESGAHQC SEAQTCVNFH GGYRCVDTNR CVEPYVQVSD NRCLCPASNP 451 500 ENSTTRP00000016054/1-443 LCREQPSSIV HRYMSITSER SVPADVFQIQ ATSVYPGAYN AFQIRAGNSQ ENSP00000309953/1-443 LCREQPSSIV HRYMTITSER SVPADVFQIQ ATSVYPGAYN AFQIRAGNSQ ENSBTAP00000028604/1-443 LCREQPSSIV HRYMSITSER SVPADVFQIQ ATSVYPGAYN AFQIRAGNSQ BACU018487/1-465 LCREQPSSIV HRYMSITSER SVPADVFQIQ ATSVYPGAYN AFQIRAGNSQ bmy_10237T0/1-500 LCREQPSSIV HRYMSITSER SVPADVFQIQ ATSVYPGAYN AFQIRAGNSQ 501 550 ENSTTRP00000016054/1-443 GDFYIRQINN VSAMLVLARP VTGPREYVLD LEMVTMNSLM SYRASSVLRL ENSP00000309953/1-443 GDFYIRQINN VSAMLVLARP VTGPREYVLD LEMVTMNSLM SYRASSVLRL ENSBTAP00000028604/1-443 GDFYIRQINN VSAMLVLARP VTGPREYVLD LEMVTMNSLM SYRASSVLRL BACU018487/1-465 GDFYIRQINN VSAMLVLARP VTGPREYVLD LEMVTMNSLM SYRASSVLRL bmy_10237T0/1-500 GDFYIRQINN VSAMLVLARP VTGPREYVLD LEMVTMNSLM SYRASSVLRL 551 600 ENSTTRP00000016054/1-443 TVFVGAYTF ENSP00000309953/1-443 TVFVGAYTF ENSBTAP00000028604/1-443 TVFVGAYTF BACU018487/1-465 TVFVGAYTF bmy_10237T0/1-500 TVFVGAYTF