KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:26 2014 Check: 00 .. Name: ENSP00000433209/1-484 Len: 590 Check: 1901 Weight: 1.00 Name: ENSBTAP00000028627/1-486 Len: 590 Check: 5401 Weight: 1.00 Name: ENSTTRP00000014342/1-408 Len: 590 Check: 7531 Weight: 1.00 Name: bmy_07605T0/1-407 Len: 590 Check: 8815 Weight: 1.00 Name: BACU001482/1-511 Len: 590 Check: 3434 Weight: 1.00 // 1 50 ENSP00000433209/1-484 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028627/1-486 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014342/1-408 ---------- ---------- ---------- ---------- ---------- bmy_07605T0/1-407 HFWIWGPLGC VLARQLRGRA LRSQPAERPG FSFVGAGTQQ SRSRPAGARP BACU001482/1-511 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000433209/1-484 --------MG SAFERVVRRV VQELDHGGEF IPVTSLQSST GFQPYCLVVR ENSBTAP00000028627/1-486 --------MA SAFEKVVRSV VRELDHK-DL TPVDSLWSST SFQPYTLLSR ENSTTRP00000014342/1-408 --------MA SAFARVVRSV VQELDHGGEL TPVDSLQSST SFQLYCLLGR bmy_07605T0/1-407 DPAARLRSMA SAFARVVKSV VRELDHSGEL TPVDSLQSST SFQLYCLLGR BACU001482/1-511 --------MA SAFARVVKSV VRELDHSGEL TPVDSLQSST SFQLYCLLGR 101 150 ENSP00000433209/1-484 KPSSSWFWKP RYKCVNLSIK DILEPDAAEP DVQRGRSFHF YDAMDGQIQG ENSBTAP00000028627/1-486 KPLSSRFWRP RYKCVNLSIR DILEPDAPEP ALECGRTFQF HDAMDGQLQG ENSTTRP00000014342/1-408 KSSSSRFWKH RYTRVNLSIR DILEPDAPEP AVECGNTFHF HDAMDGKMQG bmy_07605T0/1-407 RSSSSRFWRH RYTRVNLSIR DILEPDAPEP AVERGSTFHF HDAMDGQLQG BACU001482/1-511 RSSSSRFWRH RYTRVNLSIR DILEPDAPEP AVERGSTFHF HDAMDGQLQG 151 200 ENSP00000433209/1-484 SVELAAPGQA KIAGGAAVSD SSSTSMNVYS LSVDPNTWQT LLHERHLRQP ENSBTAP00000028627/1-486 SVKLAAPGQG RLSGGAAVSG SSSASMDLCT LRVTPNTWEA MHHERRLRQP ENSTTRP00000014342/1-408 SVELAAPGQG KLSGGAAVSG SSSASMIVCT LRVAPNTWEA MHRERRLRRP bmy_07605T0/1-407 SVELAAPGQG KLSGGAAVSG SSSASMNVCM LRVAPNTWEA MHRERRLRQP BACU001482/1-511 SVELAAPGQG KLSGGAAVSG SSSTSMHVCM LRVAPNTWEA MHRERRLRQP 201 250 ENSP00000433209/1-484 EHKVLQQLRS RGDNVYVVTE VLQTQKEVEV TRTHKREGSG RFSLPGATCL ENSBTAP00000028627/1-486 EPKTLQQLRS RGDDVFVVTE VLQTQKEVEV TRTHKQEGSG QFALPGAFCL ENSTTRP00000014342/1-408 EHKVLQQLRN RGDDVFVVTE VLQTQQEVEV TRTQKQEGSG QFALPGAMGL bmy_07605T0/1-407 EHKILQQLRN RGDDVFVVTE VLQTQKEVEV TRTQKQEGSG QFAFPGAMCL BACU001482/1-511 EHKILQQLRN RGYDVFVVTE VLQTQKEAEV TRTQKQEGSG QFALPGAMCL 251 300 ENSP00000433209/1-484 QGEGQGHLSQ KKTVTIPSGS TLAFRVAQLV IDSDLDVLLF PDKKQRTFQP ENSBTAP00000028627/1-486 QGKGEGHLSQ KKTVTIPSGS TLAFRAAQLV IGSDWDILLF PDKKQRTFLS ENSTTRP00000014342/1-408 QGRGEGHLSQ NKMVTIPAGS ILAFRVAQLV IGSDWDILFF PDKKQTTFRP bmy_07605T0/1-407 QGRGEGHLSQ KKMVTIPSGS ILAFRVAQLV IGSDWDILFF PDKKQTTFRP BACU001482/1-511 QGRGEGHLSQ KKMVTIPSGS ILAFRVAQLV IGPDWDILFF PDKKQTTFRP 301 350 ENSP00000433209/1-484 PATGHKRSTS EGAWPQLPSG LSMMRCL--- HNFLTDGVPA EG--AFTEDF ENSBTAP00000028627/1-486 LQAGRRPSSS ADSHPHPCFS LASIRALSDY FHFQPDG-ST EHWLATTDDY ENSTTRP00000014342/1-408 QQEDYRPSYI AGGQLQRSSC LTSTKFLSLR FKFLSDG-PM EDRLVTTEGF bmy_07605T0/1-407 QQE------- ---------- ---------- ---------- ---------- BACU001482/1-511 QQQGYGPSYI AGGQLPWSSC LTSIRFPSVH FKFLSDG-PV EGRLATTEDF 351 400 ENSP00000433209/1-484 QGLRAEVETI SKELELLDRE LCQLLLEGLE GVLRDQLALR ALEEALEQ-- ENSBTAP00000028627/1-486 QGLRAEVKAW AMGLEGLSKG LCGQLLGGLG QVLRDEPALQ ALEDSLEQ-- ENSTTRP00000014342/1-408 QGLQAEVEAW AVGLEGLSRE PCRQLLGALG QVLRDEAALQ ALDESLEH-- bmy_07605T0/1-407 ---------- ---------- ---------- ---------- ---------- BACU001482/1-511 QGLQAEVGAW AVGLEGLSKE PCGQLLGALG QVLRDKAALQ ALDESVSELG 401 450 ENSP00000433209/1-484 GQSLGPVEPL DGPAGAVLEC LVLSSGMLVP ELAIPVVYLL GALTMLSETQ ENSBTAP00000028627/1-486 GLCSGPVEPR DGPVGAILES LVLPSGQLET ELAGPVFYLL QALAVLSEAQ ENSTTRP00000014342/1-408 GLRGGLLESR DGPVGAVLEC LVFSSRRLEK RLAGPVFYLL QALAVLSATQ bmy_07605T0/1-407 ---------- ---------- ---------- ---------- ----VLSATQ BACU001482/1-511 GACGASWGGR AG-------- --LPEPPLTQ GLS------- ---PALSATQ 451 500 ENSP00000433209/1-484 HKLLAEALES QTLLGPLELV GSLLEQSAPW QERSTMSLPP GLLGNSWGEG ENSBTAP00000028627/1-486 HVLLAEVLEM GALSGTFWLV ESLVEQSSPW QEHRAVSLPP ERLGDSWGSE ENSTTRP00000014342/1-408 HVLLAEVLEM GALSGAFKL- ---------- ---------- ---------- bmy_07605T0/1-407 HVLLAEVLEM GALSGAFKLV ESLLEQSTPW QERRAVSLPP ELLGSSWDSE BACU001482/1-511 HVLLAEVLET GALSGTFKLV ESLLEQSTPW QERRAVSLPP ELLGSSWDSE 501 550 ENSP00000433209/1-484 APAWVLLDEC GLELGEDTPH VCWEPQAQGR MCALYASLAL LSGLSQEPH- ENSBTAP00000028627/1-486 APGWALLEAC GLEPQVGTPQ VCWEPGARGC ACALYACLAL LLRLSQLC-- ENSTTRP00000014342/1-408 ---------- ---------- ---------- ---------- ---------- bmy_07605T0/1-407 APTWVLLEEC GLEPQVGAPQ VCWKPEAQGC AYALYACLAL LFRLSRLC-- BACU001482/1-511 APTWVLLEEC GLEPQVGAPQ VCWKPEAQGC ACALYACLAL LFRLSRLCQP 551 600 ENSP00000433209/1-484 ---------- ---------- ---------- ---------- ENSBTAP00000028627/1-486 ---------- ---------- ---------- ---------- ENSTTRP00000014342/1-408 ---------- ---------- ---------- ---------- bmy_07605T0/1-407 ---------- ---------- ---------- ---------- BACU001482/1-511 AVRPQGSSPV WAELTPTQLP GATPSHLGSS PQGLGVEESQ