KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:36:26 2014 Check: 00 .. Name: ENSTTRP00000004885/1-100 Len: 158 Check: 2632 Weight: 1.00 Name: bmy_11154T0/1-147 Len: 158 Check: 1870 Weight: 1.00 Name: ENSBTAP00000028638/1-131 Len: 158 Check: 9519 Weight: 1.00 Name: ENSP00000358098/1-131 Len: 158 Check: 9784 Weight: 1.00 // 1 50 ENSTTRP00000004885/1-100 ---------- ---------- ------MDVL FVAILAVPLI LXXXXXXXXX bmy_11154T0/1-147 MQQVLGESDN DVDIVPILRS TSAESRMDVL FVAILAVPLI LGQEYEDEEG ENSBTAP00000028638/1-131 ---------- ---------- ------MDVL FVAILAVPLI LGQEYEDGEE ENSP00000358098/1-131 ---------- ---------- ------MDVL FVAIFAVPLI LGQEYEDEER 51 100 ENSTTRP00000004885/1-100 XXXXXXXXXX XXXXXXXXXX DFGANFTVDY SMFESENRLN KWDKEVMEAV bmy_11154T0/1-147 LEEDDYYQVV YYYTVTPNYD DFGANFTVDY SMFESENRLN KLDEEVMEAV ENSBTAP00000028638/1-131 LEEDEYYQVI YYYTITPSYD EFGVNFTVDY SMFESENTVN RLDEKV-EAS ENSP00000358098/1-131 LGEDEYYQVV YYYTVTPSYD DFSADFTIDY SIFESEDRLN RLDKDITEAI 101 150 ENSTTRP00000004885/1-100 ETTISRETDP ADHQKPVTEK PVTMEP---- ---------- ---------- bmy_11154T0/1-147 ETTISRETDP ADHQKPVTEK PVTMEPEREG CYDSLDGDLG RGEWKIK--- ENSBTAP00000028638/1-131 ETTISYETDR ADHQKPVIEK PVTMEPQSPD LNDAVSGLQS PGPLLLSWAL ENSP00000358098/1-131 ETTISLETAR ADHPKPVTVK PVTTEP-SPD LNDAVSSLRS PIPLLLSCAF 151 200 ENSTTRP00000004885/1-100 -------- bmy_11154T0/1-147 -------- ENSBTAP00000028638/1-131 IQGVMYFL ENSP00000358098/1-131 VQVGMYFM