KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:28 2014 Check: 00 .. Name: ENSP00000414670/1-560 Len: 578 Check: 3003 Weight: 1.00 Name: ENSBTAP00000028662/1-567 Len: 578 Check: 1804 Weight: 1.00 Name: ENSTTRP00000010318/1-566 Len: 578 Check: 8448 Weight: 1.00 Name: bmy_01240T0/1-570 Len: 578 Check: 6210 Weight: 1.00 Name: BACU015113/1-575 Len: 578 Check: 7164 Weight: 1.00 // 1 50 ENSP00000414670/1-560 MSEHSRNSDQ EELLDEEINE DEILANLSAE ELKELQSEME VMAPDPSLPV ENSBTAP00000028662/1-567 MSEHSRSSDQ EEI-DGEIDE EEILATLSPE ELKELQSEME VMAPDPRLPV ENSTTRP00000010318/1-566 MSEHSRNSDQ EELFDGEIDE DEILANLSPE ELKELQLEME VMAPDPRLPV bmy_01240T0/1-570 MSEHSRNSDQ EELFDGEIDE DEILANLSPE ELKELQLEME VMAPDPRLPV BACU015113/1-575 MSEHSRNSDQ EELFDGEIDE DEILANLSPE ELKELQLEME VMAPDPRLPV 51 100 ENSP00000414670/1-560 GMIQKDQTDK PPTGNFNHKS LVDYMYWEKA SRRMLEEERV PVTFVKSEEK ENSBTAP00000028662/1-567 GMIQKDQTDK PPTGNFDHKS LVDYMYWQKA SRRMLEDERV PLTFVPTKEK ENSTTRP00000010318/1-566 GMIQKDQTDK PPTGNFDHKS LVDYMYWQKA SRRMLEDERV PVTFVSSKGK bmy_01240T0/1-570 GMIQKDQTDK PPTGNFDHKS LVDYMYWQKA SRRMLEDERV PLTFVSSKGK BACU015113/1-575 GMIQKDQTDK PPTGNFDHKS LVDYMYWQKA SRRMLEDERV PLTFVSSKGK 101 150 ENSP00000414670/1-560 TQEEHEEIEK RNKNMAQYLK EKLNNEIVAN KRESKGSSNI QETDEED--- ENSBTAP00000028662/1-567 TQEQHEAIGK SNKNMSQYLK EKLNSEIIAH KRESQGSDNV QETNNDDNED ENSTTRP00000010318/1-566 TQEQDEEIDT SNKNVSQYLK EKLNNEITAH KTESQGSDNV QETDVED--- bmy_01240T0/1-570 TQEQHEEIDK SNKNVSQYLK EKLNNEIAAH KTESQGSDNV QETNNEDNED BACU015113/1-575 TQEQHEEIDK SNKNVSQYLK EKLNNEIAAH KTESQGSDNV QETNNEDNED 151 200 ENSP00000414670/1-560 --EEEEDDDD D--------- DEGEDDGEES EE-TNREEEG KAKEQIRNCE ENSBTAP00000028662/1-567 EGEDEEDDAE DE------EE DEGKEDSEES DQ-TKRGEEG EIKEQIKNGE ENSTTRP00000010318/1-566 --EEEEDDAE D-------EE DEGKEDSEES DEKTKREEEG EVKEQIRNGE bmy_01240T0/1-570 DVEDEEDDSE D-------EE DEGKEDSEES DEKTKRGEEG EVKEQIRNGE BACU015113/1-575 DVEDEEDDTE DEEDDSEDEE DEGKEDNEES DEKTKRGEGG EVKEQIRNGE 201 250 ENSP00000414670/1-560 NNCQQVTDKA FKEQRDRPEA QEQSEKKISK LDPKKLALDT SFLKVSTRPS ENSBTAP00000028662/1-567 NTGQQVTSKV TEEQKGRPEA QDKIEKKISK LDPKKLALDT SFLKVSARPS ENSTTRP00000010318/1-566 NNSQQVTDKV TEEQKDRPEA QEKSEKKISK LDPKKLALDT SFLKVSARPS bmy_01240T0/1-570 NNSQQVTDKV TEEQKDRPEA QEKSEKKISK LDPKKLALDT SFLKVSARPS BACU015113/1-575 NNSQQVTDKV TEEQKDRPEA QEKSEKKISK LDPKKLALDT SFLKVSARPS 251 300 ENSP00000414670/1-560 GNQTDLDGSL RRVRKNDPDM KELNLNNIEN IPKEMLLDFV NAMKKNKHIK ENSBTAP00000028662/1-567 GNQTDLDGSL RRVRQNDPDM KELNLNNIEN IPKEMLLDFV NAMKKNKHVR ENSTTRP00000010318/1-566 GNQTDLDGSL RRVRQNDPDM KELNLNNIEN IPKEMLLDFV NAMKKNKHIK bmy_01240T0/1-570 GNQTDLDGSL RRVRQNDPEV KELNLNNIEN IPKEMLLDFV NAMKKNKHIK BACU015113/1-575 GNQTDLDGSL RRVRQNDPDV KELNLNNIEN IPKEMLLDFV NAMKKNKHIK 301 350 ENSP00000414670/1-560 TFSLANVGAD ENVAFALANM LRENRSITTL NIESNFITGK GIVAIMRCLQ ENSBTAP00000028662/1-567 TFSLANVGAD ENVAFALANM LRENRSISTL NIESNFITGK GIVAIMRCLQ ENSTTRP00000010318/1-566 TFSLANVGAD ENLAFALANM LRENRSITTL NVESNFITGK GIVAIMRCLQ bmy_01240T0/1-570 TFSLANVGAD ENLAFALANM LRENRSITTL NVESNFITGK GIVAIMRCLQ BACU015113/1-575 TFSLANVGAD ENLAFALANM LRENRSITTL NIESNFITGK GIVAIMRCLQ 351 400 ENSP00000414670/1-560 FNETLTELRF HNQRHMLGHH AEMEIARLLK ANNTLLKMGY HFELPGPRMV ENSBTAP00000028662/1-567 FNETLTELRF HNQRHMLGHH AEMEIARLLK ANNTLLKMGY HFELPGPRMV ENSTTRP00000010318/1-566 FNETLTELRF HNQRHMLGHH AEMEIARLLK ANDTLLKMGY HFELPGPRMV bmy_01240T0/1-570 FNETLTELRF HNQRHMLGHY AETEIARLLK ANNTLLKMGY HFELPGPRMV BACU015113/1-575 FNETLTELRF HNQRHMLGHH AETEIARLLK ANNTLLKMGY HFELPGPRMV 401 450 ENSP00000414670/1-560 VTNLLTRNQD KQRQKRQEEQ KQQQLKEQKK LIAMLENGLG LPPGMWELLG ENSBTAP00000028662/1-567 VTNLLTRNQD RQRQKRQEEQ KQQQLKEQRK LIAMLENGLG LPPGMWEMLG ENSTTRP00000010318/1-566 VTNLLTRNQD RQRQKRQEEQ KQQQLKEQRK LIAMLENGLG LPPGMWETLR bmy_01240T0/1-570 VTNLLTRNQD RQRQKRQEEQ KQQQLKEQRK LIAMLENGLG LPPGMWETLG BACU015113/1-575 VTNLLTRNQD RQRQKRQEEQ KQQQLKEQRK LIAMLENGLG LPPGMWETLG 451 500 ENSP00000414670/1-560 GPKPDSRMQE FFQPP---PP RPPNPQNVPF SQRSEMMKKP SQAPKYRTDP ENSBTAP00000028662/1-567 GPMPDSRTQE FLQTP---PP RPPNPQAAPF SRQNEVTKKP SQPPKYRTDP ENSTTRP00000010318/1-566 GPVPDSGTQE FLQPPLPLPP RPPSSHAVPF SRQNEMTKKP SHAPKYRPDT bmy_01240T0/1-570 GPVPDSGMQE FLQPP-PPPP RPPSSHAVPF SRQNEMMKKP SHTPKYRTDP BACU015113/1-575 GPVPDSGMQE FLQPP---PP RPPSSHAVPF SRQNEMMKKP SHTPKYRTDP 501 550 ENSP00000414670/1-560 DSFRVVKLKR IQRKSRMPEA REPPEKTNLK DVIKTLKPVP RNRPPPLVEI ENSBTAP00000028662/1-567 DSFHVVKLKR IQRKSRMPEA REPPEKTNLK DVIKTLKPVP RNRPPPLVEI ENSTTRP00000010318/1-566 DTFRMVKLKR IQRKSRMPEA RESAEKTNLK DVIKTLKPVP RNRPPPLVEI bmy_01240T0/1-570 DTFRMVKLKR IQRKSRMPEA RESAEKTNLK DVIKTLKPVP RNRPPPLVEI BACU015113/1-575 DTFRMVKLKR IQRKSRMPEA RESAEKTNLK DVIKTLKPVP RNRPPPLVEI 551 600 ENSP00000414670/1-560 TPRDQLLNDI RHSSVAYLKP VQLPKELA ENSBTAP00000028662/1-567 TPRDQLLNDI RHSNIAYLKP VQLPKELA ENSTTRP00000010318/1-566 TPRDQLLNDI RHSNIAYLKP VTLLVDLN bmy_01240T0/1-570 TPRDQLLNDI RHSNVAYLKP VQLPKELA BACU015113/1-575 TPRDQLLNDI RHSNVAYLKP VQLPKELA