KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:31 2014 Check: 00 .. Name: ENSP00000416037/1-437 Len: 472 Check: 3099 Weight: 1.00 Name: ENSBTAP00000028678/1-445 Len: 472 Check: 9210 Weight: 1.00 Name: ENSTTRP00000016357/1-436 Len: 472 Check: 2685 Weight: 1.00 Name: bmy_03282T0/1-434 Len: 472 Check: 2510 Weight: 1.00 Name: BACU017310/1-295 Len: 472 Check: 7121 Weight: 1.00 // 1 50 ENSP00000416037/1-437 ---------- ---------- ---------- -----MLQDP DSDQPLNSLD ENSBTAP00000028678/1-445 ---------- ---------- -------MEN SEDRRARVDP EINRPLNSLD ENSTTRP00000016357/1-436 ---------- ---------- ---------- -----MLQDP NSDQPLNSLX bmy_03282T0/1-434 LLLAPGTELL HLFRDLFAIP SLKSCKSSVP AGEKWALDLP CQALPLPLTD BACU017310/1-295 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000416037/1-437 VKPLRKPRIP METFRKVGIP IIIALLSLAS IIIVVVLIKV ILDKYYFLCG ENSBTAP00000028678/1-445 VTPLRKSRTP LEIFKKVGIP IIAAVLILAT IIVVAVLIKV ILDSYFFFCG ENSTTRP00000016357/1-436 XXXXXXXXXX XXXXXXXXXX XXXXXXSLLT IIAVAVLIKV LLDNY-FLCG bmy_03282T0/1-434 VSPLRKSRTS LETFRKVGIP IIAALLSLLT ITAVAVLIKV VLDNY-FLCG BACU017310/1-295 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000416037/1-437 QPLHFIPRKQ LCDGELDCPL GEDEEHCVKS FPEGPAVAVR LSKDRSTLQV ENSBTAP00000028678/1-445 QPLLFIPREQ VCDGHQDCAS GEDEKYCVKK LPDGPPVAVR LSRDRSTLQV ENSTTRP00000016357/1-436 QPLHFIPREQ VCDGQQDCAS GEDEQHCVKE FPDGPPVTVR LSRDRSTLQV bmy_03282T0/1-434 QPLHFIRRGQ VCDGQQDCAS GEDEQHCVKK FPDGPPVTVR LSRDRSTLQV BACU017310/1-295 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000416037/1-437 LDSATGNWFS ACFDNFTEAL AETACRQMGY SSKPTFRAVE IGPDQDLDVV ENSBTAP00000028678/1-445 LNPATKNWAS ACFDSFTEAL AKTACRQMGY DSKPTFRAVD AGPAQDLDIV ENSTTRP00000016357/1-436 LNLATKNWAS ACFDNFTEAL AKTACGQMGY DSKPIFRAVE IGPAQDLNVV bmy_03282T0/1-434 LDLTTKNWAS ACFDNFTEAL AKTACGQMGY DSKPTFRAVE IGPAQDLDVV BACU017310/1-295 ---------- ---------- -------MGY DSKPTFRAVE IGPAQDLDVV 201 250 ENSP00000416037/1-437 EITENSQELR MRNSSGPCLS GSLVSLHCLA CGKSLKTPRV VGVEEASVDS ENSBTAP00000028678/1-445 KVTENLQELQ VQNSSGPCLS GSLVSLQCLA CGQSVKAPRV VGGKEASVDS ENSTTRP00000016357/1-436 KITENMQELQ VRNSSGPCLS RSLVSLQCIA CGKSLKVPRV VGGETASVDS bmy_03282T0/1-434 KITENMQELQ VRNSNGPCLS GSLVSLQCIA CGESLKVPRV VGGEMASVDS BACU017310/1-295 KITENMQELQ VRNSNGPCLS GSLVSLQCIA CGESLKVPRV VGGEMASVDS 251 300 ENSP00000416037/1-437 WPWQVSIQYD KQHVCGGSIL DPHWVLTAAH CFRKHTDVFN WKVRAGSDKL ENSBTAP00000028678/1-445 WPWQVSIQYD KQHICGGSIL DPHWILTAAH CFWKHLDVPN WKVRAGSDRL ENSTTRP00000016357/1-436 WPWQVSIQYD KQHICGGSIL DPHWILTAAH CFRKHLDVSN WKVMAGSDKL bmy_03282T0/1-434 WPWQVSIQYD KRHICGGSIL DRHWILTAAH CFRP------ ---------- BACU017310/1-295 WPWQVSIQYD KRHICGGSVL DPHWILTAAH CFRKHLDVSN WKVMAGSDKM 301 350 ENSP00000416037/1-437 GSFPSLAVAK IIIIEFNPMY PKDNDIALMK LQFPLTFSGT VRPICLPFFD ENSBTAP00000028678/1-445 GSFPSLPVAK IFILEPNATY PREHDIALVK LQLPLTFSGT IRPICLPFSD ENSTTRP00000016357/1-436 GNFPSLPVAK IFIIEPNITS RKERDMALVK LQLPLTFSDT VRPICLPFSD bmy_03282T0/1-434 ---------- ----EPHCLR PQEASRC--- ----VQLEGT VRPICLPFSD BACU017310/1-295 GNFPSLPVAK IFITEPNITS PKEQDIALVK LQLPLTFSGT VRPICLPFSD 351 400 ENSP00000416037/1-437 EELTPATPLW IIGWGFTKQN GGKMSDILLQ ASVQVIDSTR CNADDAYQGE ENSBTAP00000028678/1-445 EELTPGTPLW VIGWGFTEEN GGKMSDILQQ GSVQLINRTR CNAEDAYQGE ENSTTRP00000016357/1-436 EELPPATPLW IIGWGYTAEN GGKISDILLQ ASVQLIDSTR CNAEDAYQGE bmy_03282T0/1-434 EELTPATPLW VSGWGFTEQN GGKISDILLQ ASVQLIDSTR CNAEDAYQGE BACU017310/1-295 EELTPATPLW VSGWGFTEQN GGKISDILLQ ASVHLIDSTR CNAEDAYQGE 401 450 ENSP00000416037/1-437 VTEKMMCAGI PEGGVDTCQG DSGGPLMYQS DQWHVVGIVS WGYGCGGPST ENSBTAP00000028678/1-445 VTKTMMCAGL PEGGVDTCQG DSGGPLMYHS DWWQVVGIVS WGHGCGGPTT ENSTTRP00000016357/1-436 VTKKMLCAGI LEGGVDTCQG DSGGPLMYRS DRWQVVGIVS WGYGCGEPST bmy_03282T0/1-434 VTEKMLCAGI PEGGVDTCQG DSGGPLMYLS DRWQVVGIVS WGHGCGEPNT BACU017310/1-295 VTEKMLCAGI PEGHVDTCQG DSGGPLMYLS DRWQVVGIVS WGHGCGEPST 451 500 ENSP00000416037/1-437 PGVYTKVSAY LNWIYNVWKA EL ENSBTAP00000028678/1-445 PGVYTKVTAY LNWIYNVRKS DP ENSTTRP00000016357/1-436 PGVYTKTTAY LNWIYNVRKS DP bmy_03282T0/1-434 PGVYTKATAY LNWIYNVRKS DP BACU017310/1-295 PGVYTKATAY LNWIYNVRKS DP