KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:32 2014 Check: 00 .. Name: ENSBTAP00000028683/1-450 Len: 452 Check: 4496 Weight: 1.00 Name: ENSP00000261658/1-450 Len: 452 Check: 5977 Weight: 1.00 Name: ENSTTRP00000002667/1-361 Len: 452 Check: 4083 Weight: 1.00 Name: bmy_05420T0/1-452 Len: 452 Check: 2547 Weight: 1.00 Name: BACU018668/1-362 Len: 452 Check: 1885 Weight: 1.00 // 1 50 ENSBTAP00000028683/1-450 MEECPQNDLD AASLEKNEPL ESTSPQISIN EFSCHCCYDI LVNPTTLNCG ENSP00000261658/1-450 MEEPQKSYVN TMDLERDEPL KSTGPQISVS EFSCHCCYDI LVNPTTLNCG ENSTTRP00000002667/1-361 ---------- ---------- ---------- ---------- ---------- bmy_05420T0/1-452 MEESPQNDLN TTSLEEEDPL QSSSPQISVR EFSCHCCYDI LVNPTTLNCG BACU018668/1-362 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000028683/1-450 HSFCRHCLAL WWASSKKTEC PECREKWEGF PKVNILLRDA VEKLFPDAIR ENSP00000261658/1-450 HSFCRHCLAL WWASSKKTEC PECREKWEGF PKVSILLRDA IEKLFPDAIR ENSTTRP00000002667/1-361 ---------- ---------- ---------- --------DA IEKLFPDAIR bmy_05420T0/1-452 HSFCRHCLAL WWASSKKTEC PECREKWEGF PKVNILLRDA IEKLFPDAIR BACU018668/1-362 ---------- ---------- ---------- --------DA IEKLFPDAIR 101 150 ENSBTAP00000028683/1-450 MRFEDIQQNN DIVQSLAAFQ KFGNDHTPSA PHTGRGNQHR GGGFYSGVLT ENSP00000261658/1-450 LRFEDIQQNN DIVQSLAAFQ KYGNDQIPLA PNTGRANQQM GGGFFSGVLT ENSTTRP00000002667/1-361 MRSEDIQQNN DVVQSLAAFQ KYGNDKILSA PNTGRVNQQR GGGFFSGVLT bmy_05420T0/1-452 MRSEDILQNN DVVQSLAAFQ KYGNDKILSA PNTGRVNQQR GGGFFSGVLT BACU018668/1-362 MRSEDILQNN DVVQSLAAFQ KYGNDKILSA PNTGRVNQQR GGGFFSGVLT 151 200 ENSBTAP00000028683/1-450 ALTGVAVVLL VYHWSSRESE RHLLVHKAVA RWTAEEVVLW LEQLGPWASL ENSP00000261658/1-450 ALTGVAVVLL VYHWSSRESE HDLLVHKAVA KWTAEEVVLW LEQLGPWASL ENSTTRP00000002667/1-361 ALTGVAVVLL VYHWSSRESE HDLLVHKTVA TWTAEEVVLW LEQLGPWASL bmy_05420T0/1-452 ALTGVAVVLL VYHWSSRESE HDLLVHKAVA TWTAEEVVLW LEQLGPWASL BACU018668/1-362 ALTGVAVVLL VYHWSSGESE HDLLVHKAVA TWTAEEVVLW LEQLGPWASL 201 250 ENSBTAP00000028683/1-450 YRDR--FLSE RVNGRLLLTL TEEEFSKAPY TIESSSHRRA ILMELERVKA ENSP00000261658/1-450 YRER--FLSE RVNGRLLLTL TEEEFSKTPY TIENSSHRRA ILMELERVKA ENSTTRP00000002667/1-361 YRDR--FLSE RVNGRLLLTL T-EEFSRAPY TIENSSHRRA ILMELERVKA bmy_05420T0/1-452 YRDRHLLLSP RPHPRLLLTL TEEEFSRAPY TIENSSHRRA ILMELERVKA BACU018668/1-362 YRDR--FLSE RVNGRLLLTL TEEEFSRAPY TIENSSHRRA ILMELERVKA 251 300 ENSBTAP00000028683/1-450 LGVKPPQNLW EYKAVNPGRS LFLLYALKSS PRLGLLYLYL FDYTDTFLPF ENSP00000261658/1-450 LGVKPPQNLW EYKAVNPGRS LFLLYALKSS PRLSLLYLYL FDYTDTFLPF ENSTTRP00000002667/1-361 LGVKPXXXXX XXXAVNPGRS LFLLYALKSS PRLCLLYLYL FDYTDTFLPF bmy_05420T0/1-452 LGVKPPQNLW EYKAVNPGRS LFLLYALKSS PRLCLLYLYL FDYTDTFLPF BACU018668/1-362 LGVKPPQNLW EYKAVNPGRS LFLLYALKSS PRLCLLYLYL FDYTDTFLPF 301 350 ENSBTAP00000028683/1-450 IHTICPLQED GSGDDIISKL LDLREPTWKQ WREFLIKYSF LPYQLIAEFA ENSP00000261658/1-450 IHTICPLQED SSGEDIVTKL LDLKEPTWKQ WREFLVKYSF LPYQLIAEFA ENSTTRP00000002667/1-361 IHTICPLQED SSGEDIITKL LDLREPTWKQ WREFLVKYSF LPYQLIAEFA bmy_05420T0/1-452 IHTICPLQED SSGEDIITKL LDLREPTWKQ WREFLVKYSF LPYQLIAEFA BACU018668/1-362 IHTICPLQED SSGEDIITKL LDLREPTWKQ WREFLVKYSF LPYQLIAEFA 351 400 ENSBTAP00000028683/1-450 WDWLEVHYWT SRFLIVNAML LSVLELFSFW RIWSRSELKT VPQRMWSHFW ENSP00000261658/1-450 WDWLEVHYWT SRFLIINAML LSVLELFSFW RIWSRSELKT VPQRMWSHFW ENSTTRP00000002667/1-361 WDWLEVHYWT SRFLIVNAML LSVLELFSFW RTWSRSELKT VPQRMWSHFW bmy_05420T0/1-452 WDWLEVHYWT SRFLIVNAML LSVLELFSFW RIWSRSELKT VPQRMWSHFW BACU018668/1-362 WDWLEVHYWT SRFLIVNAML LSVLELFSFW RIWSRSELKT VPQRMWSHFW 401 450 ENSBTAP00000028683/1-450 KVSTQGLFVA MFWPLIPQFV CNCLFYWALY FNPIINIDLV VKEVRRLETQ ENSP00000261658/1-450 KVSTQGLFVA MFWPLIPQFV CNCLFYWALY FNPIINIDLV VKELRRLETQ ENSTTRP00000002667/1-361 KVSTQGLFVA MFWPLIPQFV CNCLFYWALY FNPIINIDHV VKEVRRLETQ bmy_05420T0/1-452 KVSTQGLFVA MFWPLIPQFV CNCLFYWALY FNPIINIDLV VKEVRRLETQ BACU018668/1-362 KVSTQGLFVA MFWPLIPQFV CNCLFYWALY FNPIINIDLV VKEVRRLETQ 451 500 ENSBTAP00000028683/1-450 VL ENSP00000261658/1-450 VL ENSTTRP00000002667/1-361 VL bmy_05420T0/1-452 VL BACU018668/1-362 VL