KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:36:33 2014  Check: 00 ..

 Name: ENSBTAP00000028684/1-159  Len:    208  Check:  212  Weight:  1.00
 Name: ENSP00000393847/1-165     Len:    208  Check:  721  Weight:  1.00
 Name: ENSTTRP00000002668/1-128  Len:    208  Check:  4856  Weight:  1.00
 Name: bmy_05421T0/1-131         Len:    208  Check:  936  Weight:  1.00
 Name: BACU018669/1-130          Len:    208  Check:  6896  Weight:  1.00

//


                          1                                                   50
ENSBTAP00000028684/1-159  MAPLPLCPKV GLLLLL---- --LLGSEPGL RAAPQRSHVH RRGLIGLAGT 
ENSP00000393847/1-165     MGPLPVCLPI MLLLLLPSLL LLLLLPGPGS GEASRILRVH RRGILELAGT 
ENSTTRP00000002668/1-128  ---------- ---------- ---------- ----SRSHVH RRGLI---AT 
bmy_05421T0/1-131         ---------- ---------- ---------- ---------- ---------- 
BACU018669/1-130          ---------- ---------- ---------- -----RSHVH RRGLIELAGT 


                          51                                                 100
ENSBTAP00000028684/1-159  IDCVGPRPAL VYVKYGCFCG LGGHGQPQDA IDWCCHAHDC CYTHAENSGC 
ENSP00000393847/1-165     VGCVGPRTPI AYMKYGCFCG LGGHGQPRDA IDWCCHGHDC CYTRAEEAGC 
ENSTTRP00000002668/1-128  VHCAGIRTAM AYMNYGCYXX XXXXXXXXXX XXXCCHSHDC CYKRAEVAGC 
bmy_05421T0/1-131         ---------M AYMNYGCYCG LGGHGQPRDA IDWCCHSHDC CYKRAEDAGC 
BACU018669/1-130          VHCAGTRTAM AYMNYGCYCG LGGHGQPRDA IDWCCHSHDC CYKRAEDAGC 


                          101                                                150
ENSBTAP00000028684/1-159  NPKLQPYSWN CVSQSVKCEP TEDKCQELIC KCDQEFAHCL ARAEYNIKYL 
ENSP00000393847/1-165     SPKTERYSWQ CVNQSVLCGP AENKCQELLC KCDQEIANCL AQTEYNLKYL 
ENSTTRP00000002668/1-128  SPKMERYSWQ CVNQHILCGP VEDKCQELMC KCDQEIAYCL AKTEYNLKYL 
bmy_05421T0/1-131         R--------- ---------P VEDKCQELMC KCDREIAYCL AKTEYNLKYL 
BACU018669/1-130          SPKMGRYSWQ CVNQHILCGP VEDKCQELMC KCDLEIAYCL AKTEYNLKYL 


                          151                                                200
ENSBTAP00000028684/1-159  FYPHF----- ---LCGNY-- ---------- --SPECD--- ---------- 
ENSP00000393847/1-165     FYPQF----- ---LCEPD-- ---------- --SPKCD--- ---------- 
ENSTTRP00000002668/1-128  LYPRF----- ---LCGKD-- ---------- --SPKCD--- ---------- 
bmy_05421T0/1-131         LYPRFLYQQP YSVLCRRKLG PIVKAETLVF AFTPVPELGA GAIFVSSLIN 
BACU018669/1-130          LYPRF----- ---LCGKD-- ---------- --SPKCD--- ---------- 


                          201                                                250
ENSBTAP00000028684/1-159  -------- 
ENSP00000393847/1-165     -------- 
ENSTTRP00000002668/1-128  -------- 
bmy_05421T0/1-131         VKSSMPIL 
BACU018669/1-130          --------