KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:36:34 2014 Check: 00 .. Name: ENSP00000268035/1-1367 Len: 1368 Check: 5371 Weight: 1.00 Name: ENSTTRP00000013918/1-1358 Len: 1368 Check: 8393 Weight: 1.00 Name: bmy_06120T0/1-1175 Len: 1368 Check: 2462 Weight: 1.00 Name: ENSBTAP00000028690/1-1154 Len: 1368 Check: 4326 Weight: 1.00 // 1 50 ENSP00000268035/1-1367 MKSGSGGGSP TSLWGLLFLS AALSLWPTSG EICGPGIDIR NDYQQLKRLE ENSTTRP00000013918/1-1358 -------GSP TSLWGLLFFS AALSLWPTSG EICGPGIDIR NDYQQLKRLE bmy_06120T0/1-1175 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028690/1-1154 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000268035/1-1367 NCTVIEGYLH ILLISKAEDY RSYRFPKLTV ITEYLLLFRV AGLESLGDLF ENSTTRP00000013918/1-1358 NCTVIEGYLH ILLISKAEDY RSYRFPKLTV ITEYLLLFRV AGLESLGDLF bmy_06120T0/1-1175 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028690/1-1154 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000268035/1-1367 PNLTVIRGWK LFYNYALVIF EMTNLKDIGL YNLRNITRGA IRIEKNADLC ENSTTRP00000013918/1-1358 PNLTVIRGWK LFYNYALVIF EMTNLKDIGL YNLRNITRGA IRIEKNADLC bmy_06120T0/1-1175 ---------- ---------- ---------- ----MVPGGA IWLLADLTPC ENSBTAP00000028690/1-1154 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000268035/1-1367 YLSTVDWSLI LDAVSNNYIV GNKPPKECGD LCPGTMEEKP MCEKTTINNE ENSTTRP00000013918/1-1358 YLSTVDWSLI LDAVSNNYIV GNKPPKECGD LCPGTMEEKP LCEKTTINNE bmy_06120T0/1-1175 LSPTV----- ---------- ---------- ---------- ---------- ENSBTAP00000028690/1-1154 ----V----- ---------- ---------- ---------- ---------- 201 250 ENSP00000268035/1-1367 YNYRCWTTNR CQKMCPSTCG KRACTENNEC CHPECLGSCS APDNDTACVA ENSTTRP00000013918/1-1358 YNYRCWTTNR CQKMCPSTCG KRACTENHEC CHPECLGSCS APDNDTACVA bmy_06120T0/1-1175 ---------- ----CPSACG KRACTENHEC CHPECLGSCS APDNDTACVA ENSBTAP00000028690/1-1154 ---------- ----CPSACG KRACTETHEC CHPECLGSCS APDNATACVA 251 300 ENSP00000268035/1-1367 CRHYYYAGVC VPACPPNTYR FEGWRCVDRD FCANILSAES SDSEGFVIHD ENSTTRP00000013918/1-1358 CRHYYYAGVC VPSCPPNTYR FEGWRCVDRD FCANIPNAES SDSEGFVIHD bmy_06120T0/1-1175 CRHYYYAGVC VPSCPPNTYR FEGWRCVDRD FCANIPNAES SDSEGFVIHD ENSBTAP00000028690/1-1154 CRHYYYAGVC VPSCPPNTYR FEGWRCVDRD FCANIPNAES SDSEGFVIHD 301 350 ENSP00000268035/1-1367 GECMQECPSG FIRNGSQSMY CIPCEGPCPK VCEEEKKTKT IDSVTSAQML ENSTTRP00000013918/1-1358 GECMQECPSG FIRNGSQSMY CIPCEGPCPK VCEEEKKTKT IDSVTSAQML bmy_06120T0/1-1175 GECMQECPSG FIRNGSQSMY CIPCEGPCPK VCEEEKKTKT IDSVTSAQML ENSBTAP00000028690/1-1154 GECMQECPSG FIRNGSQSMY CIPCEGPCPK VCEEEKKTKT IDSVTSAQML 351 400 ENSP00000268035/1-1367 QGCTIFKGNL LINIRRGNNI ASELENFMGL IEVVTGYVKI RHSHALVSLS ENSTTRP00000013918/1-1358 QGCTIFKGNL LINIRRGNNI ASELENFMGL IEVVTGYVKI RHSHALVSLS bmy_06120T0/1-1175 QGCTIFKGNL LINIRRGNNI ASELENFMGL IEVVTGYVKI RHSHALVSLS ENSBTAP00000028690/1-1154 QGCTIFKGNL LINIRRGNNI ASELENFMGL IEVVTGYVKI RHSHALVSLS 401 450 ENSP00000268035/1-1367 FLKNLRLILG EEQLEGNYSF YVLDNQNLQQ LWDWDHRNLT IKAGKMYFAF ENSTTRP00000013918/1-1358 FLKNLRQILG EEQLEGNYSF YVLDNQNLQQ LWDWDHRNLT IKAGKMYFAF bmy_06120T0/1-1175 FLKNLRQILG EEQLEGNYSF YVLDNQNLQQ LWDWDHRNLT IKAGKMYFAF ENSBTAP00000028690/1-1154 FLKNLRQILG EEQLEGNYSF YVLDNQNLQQ LWDWDHRNLT IKAGKMYFAF 451 500 ENSP00000268035/1-1367 NPKLCVSEIY RMEEVTGTKG RQSKGDINTR NNGERASCES DVLHFTSTTT ENSTTRP00000013918/1-1358 NPKLCVSEIY RMEEVTGTKG RQSKGDINTR NNGERASCES DVLHFTSTTT bmy_06120T0/1-1175 NPKLCVSEIY RMEEVTGTKG RQSKGDINTR NNGERASCES DVLHFTSTTT ENSBTAP00000028690/1-1154 NPKLCVSEIY RMEEVTGTKG RQSKGDINTR NNGERASCES DVLHFTSTTT 501 550 ENSP00000268035/1-1367 SKNRIIITWH RYRPPDYRDL ISFTVYYKEA PFKNVTEYDG QDACGSNSWN ENSTTRP00000013918/1-1358 WKNRIIITWH RYRPPDYRDL ISFTVYYKEA PFKNVTEYDG QDACGSNSWN bmy_06120T0/1-1175 WKNRIIITWH RYRPPDYRDL ISFTVYYKEA PFKNVTEYDG QDACGSNSWN ENSBTAP00000028690/1-1154 SKNRIIITWH RYRPPDYRDL ISFTVYYKEA PFKNVTEYDG QDACGSNSWN 551 600 ENSP00000268035/1-1367 MVDVDLPPNK DVEPGILLHG LKPWTQYAVY VKAVTLTMVE NDHIRGAKSE ENSTTRP00000013918/1-1358 MVDVDLPPNK DAEPGILLHG LKPWTQYAVY VKAVTLTMVE NDHIRGAKSE bmy_06120T0/1-1175 MVDVDLPPNK DVEPGILLHG LKPWTQYAVY VKAVTLTMVE NDHIRGAKSE ENSBTAP00000028690/1-1154 MVDVDLPPNK DVEPGILLHG LKPWTQYAVY VKAVTLTMVE NDHIRGAKSE 601 650 ENSP00000268035/1-1367 ILYIRTNASV PSIPLDVLSA SNSSSQLIVK WNPPSLPNGN LSYYIVRWQR ENSTTRP00000013918/1-1358 ILYIRTNASV PSIPLDVLSA SNSSSQLIVK WNPPSLPNGN LSYYIVRWQR bmy_06120T0/1-1175 ILYIRTNASV PSIPLDVLSA SNSSSQLIVK WNPPSLPNGN LSYYIVRWQR ENSBTAP00000028690/1-1154 ILYIRTNASV PSIPLDVLSA SNSSSQLIVK WNPPSLPNGN LSYYIVRWQR 651 700 ENSP00000268035/1-1367 QPQDGYLYRH NYCSK-DKIP IRKYADGTID IEEVTENPKT EVCGGEKGPC ENSTTRP00000013918/1-1358 --LDSYLYRH NYCSK-DKIP IRKYADGTID VEEVTENPKT EVCGGEKGPC bmy_06120T0/1-1175 QPQDSYLYRH NYCSKADKIP IRKYADGTID IEEVTENPKT EVCGGEKGPC ENSBTAP00000028690/1-1154 QPQDSYLYRH NYCSK-DKIP IRKYADGTID VEEVTENPKT EVCGGEKGPC 701 750 ENSP00000268035/1-1367 CACPKTEAEK QAEKEEAEYR KVFENFLHNS IFVPRPERKR RDVMQVANTT ENSTTRP00000013918/1-1358 CACPKTEAEK QAEKEEAEYR KVFENFLHNA IFVPRPERKR REVMQVANTT bmy_06120T0/1-1175 CACPKTEAEK QAEKEEAEYR KVFENFLHNA IFVPRPERKR REVMQVANTT ENSBTAP00000028690/1-1154 CACPKTEAEK QAEKEEAEYR KVFENFLHNA IFVPRPERKR REVMQIANTT 751 800 ENSP00000268035/1-1367 MSSRSRNTTA ADTYNITDPE ELETEYPFFE SRVDNKERTV ISNLRPFTLY ENSTTRP00000013918/1-1358 MSSRNRNTTV VDTYNITDPE ELETEYPFFE SRVDNKERTV ISNLRPFTLY bmy_06120T0/1-1175 MSSRSRNTTV VDTYNITDPE ELETEYPFFE SRVDNKERTV ISNLRPFTLY ENSBTAP00000028690/1-1154 MSSRSRNTTV LDTYNITDPE ELETEYPFFE SRVDNKERTV ISNLRPFTLY 801 850 ENSP00000268035/1-1367 RIDIHSCNHE AEKLGCSASN FVFARTMPAE GADDIPGPVT WEPRPENSIF ENSTTRP00000013918/1-1358 RIDIHSCNHE AEKLGCSASN FVFARTMPAE GADDIPGPVT WEPRPENSIF bmy_06120T0/1-1175 RIDIHSCNHE AEKLGCSASN FVFARTMPAE GADDIPGPVT WEPRPENSIF ENSBTAP00000028690/1-1154 RIDIHSCNHE AEKLGCSASN FVFARTMPAE GADDIPGPVT WEPRPENSIF 851 900 ENSP00000268035/1-1367 LKWPEPENPN GLILMYEIKY GSQVEDQREC VSRQEYRKYG GAKLNRLNPG ENSTTRP00000013918/1-1358 LKWPEPENPN GLILMYEIKY GSQVEDQREC VSRQEYRKYG GAKLNRLNPG bmy_06120T0/1-1175 LKWPEPENPN GLILMYEIKY GSQVEDQREC VSRQEYRKYG GAKLNRLNPG ENSBTAP00000028690/1-1154 LKWPEPENPN GLILMYEIKY GSQVEDQREC VSRQEYRKYG GAKLNRLNPG 901 950 ENSP00000268035/1-1367 NYTARIQATS LSGNGSWTDP VFFYVQAKTG YENFIHLIIA LPVAVLLIVG ENSTTRP00000013918/1-1358 NYTARIQATS LSGNGSWTDP VFFYVQAKTT YENFIHLIIA LPIAVLLIVG bmy_06120T0/1-1175 NYTARIQATS LSGNGSWTDP VFFYVQAKTT YENFIHLIIA LPIAVLLIVG ENSBTAP00000028690/1-1154 NYTARIQATS LSGNGSWTDP VFFYVQAKTT YENFIHLMIA LPIAVLLIVG 951 1000 ENSP00000268035/1-1367 GLVIMLYVFH RKRNNSRLGN GVLYASVNPE YFSAADVYVP DEWEVAREKI ENSTTRP00000013918/1-1358 GLVIMLYVFH RKRNNSRLGN GVLYASVNPE YFSAADVYVP DEWEVAREKI bmy_06120T0/1-1175 GLVIMLYVFH RKRNNSRLGN GVLYASVNPE YFSAADVYVP DEWEVAREKI ENSBTAP00000028690/1-1154 GLVIMLYVFH RKRNSSRLGN GVLYASVNPE YFSAADVYVP DEWEVAREKI 1001 1050 ENSP00000268035/1-1367 TMSRELGQGS FGMVYEGVAK GVVKDEPETR VAIKTVNEAA SMRERIEFLN ENSTTRP00000013918/1-1358 TMSRELGQGS FGMVYEGVAK GVVKDEPETR VAIKTVNEAA SMRERIEFLN bmy_06120T0/1-1175 TMSRELGQGS FGMVYEGVAK GVVKDEPETR VAIKTVNEAA SMRERIEFLN ENSBTAP00000028690/1-1154 TMSRELGQGS FGMVYEGVAK GVVKDEPETR VAIKTVNEAA SMRERIEFLN 1051 1100 ENSP00000268035/1-1367 EASVMKEFNC HHVVRLLGVV SQGQPTLVIM ELMTRGDLKS YLRSLRPEME ENSTTRP00000013918/1-1358 EASVMKEFNC HHVVRLLGVV SQGQPTLVIM ELMTRGDLKS YLRSLRPEME bmy_06120T0/1-1175 EASVMKEFNC HHVVRLLGVV SQGQPTLVIM ELMTRGDLKS YLRSLRPEME ENSBTAP00000028690/1-1154 EASVMKEFNC HHVVRLLGVV SQGQPTLVIM ELMTRGDLKS YLRSLRPEME 1101 1150 ENSP00000268035/1-1367 NNPVLAPPSL SKMIQMAGEI ADGMAYLNAN KFVHRDLAAR NCMVAEDFTV ENSTTRP00000013918/1-1358 NNPVLAPPSL SKMIQMAGEI ADGMAYLNAN KFVHRDLAAR NCMVAEDFTV bmy_06120T0/1-1175 NNPVLAPPSL SKMIQMAGEI ADGMAYLNAN KFVHRDLAAR NCMVAEDFTV ENSBTAP00000028690/1-1154 NNPVLAPPSL SKMIQMAGEI ADGMAYLNAN KFVHRDLAAR NCMVAEDFTV 1151 1200 ENSP00000268035/1-1367 KIGDFGMTRD IYETDYYRKG GKGLLPVRWM SPESLKDGVF TTYSDVWSFG ENSTTRP00000013918/1-1358 KIGDFGMTRD IYETDYYRKG GKGLLPVRWM SPESLKDGVF TTHSDVWSFG bmy_06120T0/1-1175 KIGDFGMTRD IYETDYYRKG GKGLLPVRWM SPESLKDGVF TTHSDVWSFG ENSBTAP00000028690/1-1154 KIGDFGMTRD IYETDYYRKG GKGLLPVRWM SPESLKDGVF TTHSDVWSFG 1201 1250 ENSP00000268035/1-1367 VVLWEIATLA EQPYQGLSNE QVLRFVMEGG LLDKPDNCPD MLFELMRMCW ENSTTRP00000013918/1-1358 VVLWEIATLA EQPYQGLSNE QVLRFVMEGG LLDKPDNCPD MLFELMRMCW bmy_06120T0/1-1175 VVLWEIATLA EQPYQGLSNE QVLRFVMEGG LLDKPDNCPD MLFELMRMCW ENSBTAP00000028690/1-1154 VVLWEIATLA EQPYQGLSNE QVLRFVMEGG LLDKPDNCPD MLFELMRMCW 1251 1300 ENSP00000268035/1-1367 QYNPKMRPSF LEIISSIKEE MEPGFREVSF YYSEENKLPE PEELDLEPEN ENSTTRP00000013918/1-1358 QYNPKMRPSF LEIISSIKDE MEPGFREVSF YYSEENKPPE PEELDLEPEN bmy_06120T0/1-1175 QYNPKMRPSF LEIISSIKDE MEPGFREVSF YYSEENKPPE PEELDLEPEN ENSBTAP00000028690/1-1154 QYNPKMRPSF LEIISSVKDE MEAGFREVSF YYSEENKPPE PEELDLEPEN 1301 1350 ENSP00000268035/1-1367 MESVPLDPSA SSSSLPLPDR HSGHKAENGP GPGVLVLRAS FDERQPYAHM ENSTTRP00000013918/1-1358 MESVPLDPSA SSSSLPLPDR HSGHKAENGP GPGVLVLRAS FDERQPYAHM bmy_06120T0/1-1175 MESVPLDPSA SSSSLPLPDR HSGHKAENGP GPGVLVLRAS FDERQPYAHM ENSBTAP00000028690/1-1154 MESVPLDPSA SSASLPLPDR HSGHKAENGP GPGVLVLRAS FDERQPYAHM 1351 1400 ENSP00000268035/1-1367 NGGRKNERAL PLPQSSTC ENSTTRP00000013918/1-1358 NGGRKKERAL PLPQSSTC bmy_06120T0/1-1175 NGGRKKERAL PLPQSSTC ENSBTAP00000028690/1-1154 NGGRKNERAL PLPQSSTC