KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:39 2014 Check: 00 .. Name: BACU002187/1-340 Len: 350 Check: 269 Weight: 1.00 Name: ENSP00000387498/1-343 Len: 350 Check: 7153 Weight: 1.00 Name: ENSBTAP00000028720/1-344 Len: 350 Check: 8932 Weight: 1.00 Name: bmy_06419T0/1-344 Len: 350 Check: 1586 Weight: 1.00 Name: ENSTTRP00000007763/1-344 Len: 350 Check: 943 Weight: 1.00 // 1 50 BACU002187/1-340 MRFWATCPSL STIYFLFVIF AGSTIFHCHQ RL-------- --ALVPAPCV ENSP00000387498/1-343 MLVVQMPFSF PMAHFILFVF TVSTIFHVQQ RLAKIQAMWE LPVQIPVLAS ENSBTAP00000028720/1-344 MLSTQTFFFF PTAPFILFVF TASTIFHLHQ RLEKMQPTWE LEALEPATME bmy_06419T0/1-344 MLSTQAPXFF PTAPFILFVF TASTVFHLQQ RLAKIQPTRE LQTLEPATKE ENSTTRP00000007763/1-344 MLSTQAPFFF PTAPFILFVF TASTVFHLQQ RLVKIQPTWE LQTLELATEE 51 100 BACU002187/1-340 YPGRVVLFPR HLPWGGGHVH HQLQRPPGEP DGGVRHPVRP GQDERAAGLH ENSP00000387498/1-343 TSKALGPSQL ----RGMWTI NAIGR-LGNQ MGEYATLYAL AKMNGRPAFI ENSBTAP00000028720/1-344 TPSRPQPRPQ L---KGMWTI NAIGR-LGNQ MGEYATLYAL AKMNGRAAFI bmy_06419T0/1-344 SPSSTQWSPQ P---KGMWTV NAIGR-LGNQ MGEYATLYAL AKMNGRLAFI ENSTTRP00000007763/1-344 SPSSPQRSPR P---KGMWTI NAIGR-LGNQ MGEYATLYAL AKMNGRPAFI 101 150 BACU002187/1-340 QPHMHSTLAP IFRITLPILH DTMASRIPWQ NYPLNDWMEE RYRHIPGEYV ENSP00000387498/1-343 PAQMHSTLAP IFRITLPVLH SATASRIPWQ NYHLNDWMEE EYRHIPGEYV ENSBTAP00000028720/1-344 PPQMHSTLAP IFRITLPVLH DATARSVPWQ NYHLNDWMEE QYRHIPGEYV bmy_06419T0/1-344 PPQMHSTLAP IFRITLPVLH DTTASRIPWQ NYHLNDWMEE RYRHIPGKYV ENSTTRP00000007763/1-344 PPQMHSTLAP IFRITLPVLH DTTASRIPWQ NYPLNDWMEE RYRHIPGEYV 151 200 BACU002187/1-340 RLTGYPCSWT FYHHLRAEIL QEFTLHDHVR EEAQNFLRGL QVNGSRPSIY ENSP00000387498/1-343 RFTGYPCSWT FYHHLRQEIL QEFTLHDHVR EEAQKFLRGL QVNGSRPGTF ENSBTAP00000028720/1-344 RLTGYPCSWT FYHHLRAEIL QEFTLHAHVR EEAQNFLRGL RVNGSRPSTY bmy_06419T0/1-344 RLTGYPCSWT FYHHLRAEIL QEFTLHDHVR EEAQNFLRGL QVNGSRPSTY ENSTTRP00000007763/1-344 RLTGYPCSWT FYHHLRAEIL QEFTLHDHVR EEAQNFLRGL QVNGSRPSTY 201 250 BACU002187/1-340 VGVHVRRGDY VHVMPNVWKG VVADRGYLEQ ALDWFRACYS SPLFVVTSDD ENSP00000387498/1-343 VGVHVRRGDY VHVMPKVWKG VVADRRYLQQ ALDWFRARYS SLIFVVTSNG ENSBTAP00000028720/1-344 VGVHVRRGDY VHVMPNVWKG VVADRRYLEQ ALDWFRARYS APIFVVSSNG bmy_06419T0/1-344 VGVHVRRGDY VHVMPNVWKG VVADRRYLQQ ALDWFRARYR SPIFVVTSNG ENSTTRP00000007763/1-344 VGVHVRRGDY VHVMPNVWKG VVADRGYLQQ ALDWFRARYR SPIFVVTSNG 251 300 BACU002187/1-340 TAWCWQNFKG SLRDVVFTGN GLQGSPARDF ALLTQRNHAI ITVGTFGIWA ENSP00000387498/1-343 MAWCRENIDT SHGDVVFAGD GIEGSPAKDF ALLTQCNHTI MTIGTFGIWA ENSBTAP00000028720/1-344 MAWCRENINA SRGDVVFAGN GNEGSPAKDF ALLTQCNHTI MTIGTFGIWA bmy_06419T0/1-344 MAWCRENIEA SRGDVVFAGN GIEGSPAKDF ALLTQCNHTI MTIGTFGIWA ENSTTRP00000007763/1-344 MAWCRENIEA SRGDVVFAGN GIEGSPAKDF ALLTQCNHTI MTIGTFGIWA 301 350 BACU002187/1-340 ACLTGGNTIY LASFTLPNSP FHTVFKPQVA FLPKRVGTAA NLGQARENVP ENSP00000387498/1-343 AYLTGGDTIY LANYTLPDSP FLKIFKPEAA FLPEWTGIAA DLSPLLKH-- ENSBTAP00000028720/1-344 AYLAGGETIY LANYTLPDSP FLKVFKPEAA FLPEWIGIPA DLSPLLKH-- bmy_06419T0/1-344 AYLAXGETIY LANYTLPDSP FLKVFKPEAA FLPEWIGIAA DLSPLLKH-- ENSTTRP00000007763/1-344 AYLAGGETIY LANYTLPDSP FLKVFKPEAA FLPDWTGIAA DLSPLLKH--