KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:43 2014 Check: 00 .. Name: ENSBTAP00000028744/1-453 Len: 479 Check: 3441 Weight: 1.00 Name: ENSP00000355114/1-453 Len: 479 Check: 3361 Weight: 1.00 Name: ENSTTRP00000010041/1-453 Len: 479 Check: 4002 Weight: 1.00 Name: bmy_05684T0/1-394 Len: 479 Check: 8080 Weight: 1.00 Name: BACU006661/1-453 Len: 479 Check: 3492 Weight: 1.00 // 1 50 ENSBTAP00000028744/1-453 MARKAVSRKR KAPALPGAGS DAQDPQFGWD HSLHKRKRLP PVKRSLVYYL ENSP00000355114/1-453 MARKVVSRKR KAPASPGAGS DAQGPQFGWD HSLHKRKRLP PVKRSLVYYL ENSTTRP00000010041/1-453 MARKAVSRKR KAPASPGAGS DAQGPQFGWD HSLHKRKRLP PVKRSLVYYL bmy_05684T0/1-394 MARKAVSRKR KAPASPGAGS DAQGPQ---- ---------- ---------- BACU006661/1-453 MARKAVSRKR KASASPGAGS DAQGPQFGWD HSLHKRKRLP PVKRSLVHYL 51 100 ENSBTAP00000028744/1-453 KNREVRLQNE TSYSRVLHGY AAQQLPSLLK EREFHLGTLN KVFASQWLNH ENSP00000355114/1-453 KNREVRLQNE TSYSRVLHGY AAQQLPSLLK EREFHLGTLN KVFASQWLNH ENSTTRP00000010041/1-453 KNREVRLQNE TNYSRVLHGY AAQQLPSLLK EREFHLGTLN KVFASQWLNH bmy_05684T0/1-394 ---------- ---------- ---------- ---------- ---------- BACU006661/1-453 KNREVRLQNE TNYSRVLHGY AAQQLPSLLK EREFHLGTLN KVFASQWLNH 101 150 ENSBTAP00000028744/1-453 RQVVCGTKCN TLFVVDVQTS QITKIPILKD REPGCVTQQG CGIHAIELNP ENSP00000355114/1-453 RQVVCGTKCN TLFVVDVQTS QITKIPILKD REPGGVTQQG CGIHAIELNP ENSTTRP00000010041/1-453 RQVVCGTKCN TLFVVDVQTS QITKIPILKD REPGGVTQQG CGIHAIELNP bmy_05684T0/1-394 ---------- -LFVVDVQTS QITKIPILKD REPGGVTQQG CGIHAIELNP BACU006661/1-453 RQVVCGTKCN TLFVVDVQTS QITKIPILKD REPGGVTQQG CGIHAIELNP 151 200 ENSBTAP00000028744/1-453 SRTLLATGGD NPNSLAIYRL PTLDPVCVGD DGHKDWIFSI AWISDTMAVS ENSP00000355114/1-453 SRTLLATGGD NPNSLAIYRL PTLDPVCVGD DGHKDWIFSI AWISDTMAVS ENSTTRP00000010041/1-453 SRTLLATGGD NPNSLAIYRL PTLDPVCVGD DGHKDWIFSI AWISDTMAVS bmy_05684T0/1-394 SRTLLATGGD NPNSLAIYRL PTLDPVCVGD DGHKDWIFSI AWISDTMAVS BACU006661/1-453 SRTLLATGGD NPNSLAIYRL PTLDPVCVGD DGHKDWIFSI AWISDTMAVS 201 250 ENSBTAP00000028744/1-453 GSRDGSMGLW EVTDDVLTKS DARHNVSRVP VYSHITHKAL KDIPKEDTNP ENSP00000355114/1-453 GSRDGSMGLW EVTDDVLTKS DARHNVSRVP VYAHITHKAL KDIPKEDTNP ENSTTRP00000010041/1-453 GSRDGSMGLW EVTDDVLTKS DARHNVSQVP VYAHITHKAL KDIPKEDTNP bmy_05684T0/1-394 GSRDGSMGLW EVTDDVLTKS DARHNVSRVP VYAHITHKAL KDIPKEDTNP BACU006661/1-453 GSRDGSMGLW EVTDDVLTKS DARHNVSRVP VYAHITHKAL KDIPKEDTNP 251 300 ENSBTAP00000028744/1-453 DNCKVRALAF NNKNKELGAV SLDGYFHLWK TENTLSKLLS TKLPYCRENV ENSP00000355114/1-453 DNCKVRALAF NNKNKELGAV SLDGYFHLWK AENTLSKLLS TKLPYCRENV ENSTTRP00000010041/1-453 DNCKVRALAF NNKNKELGAV SLDGYFHLWK AENTLSKLLS TKLPYCRENV bmy_05684T0/1-394 DNCKVRALAF NNKNKELGAV SLDGYFHLWK AENTLSKLLS TKLPYCRENV BACU006661/1-453 DNCKVRALAF NNKNKELGAV SLDGYFHLWK AENTLSKLLS TKLPYCRENV 301 350 ENSBTAP00000028744/1-453 CLAYGNEWSV YAVGSQAHVS FLDPRQPSYN VKSVCSRERG S--------- ENSP00000355114/1-453 CLAYGSEWSV YAVGSQAHVS FLDPRQPSYN VKSVCSRERG S--------- ENSTTRP00000010041/1-453 CLAYGSEWSV YAVGSQAHVS FLDPRQPSYN VKSVCSRERG S--------- bmy_05684T0/1-394 CLAYGSEWSV YAVGSQAHVS FLDPRQPSYN VKSVCSRERG SGKRPPYYPQ BACU006661/1-453 CLAYGSEWSV YAVGSQAHVS FLDPRQPSYN VKSVCSRERG S--------- 351 400 ENSBTAP00000028744/1-453 ---------- -------GIR SVSFYEHIIT VGTGQGSLLF YDIRAQRFLE ENSP00000355114/1-453 ---------- -------GIR SVSFYEHIIT VGTGQGSLLF YDIRAQRFLE ENSTTRP00000010041/1-453 ---------- -------GIR SVSFYEHIIT VGTGQGSLLF YDIRAQRFLE bmy_05684T0/1-394 FQYGLETYNG EELRVMKGIR SVSFYEHIIT VGTGQGSLLF YDIRAQRFLE BACU006661/1-453 ---------- -------GIR SVSFYEHIIT VGTGQGSLLF YDIRAQRFLE 401 450 ENSBTAP00000028744/1-453 EKLSACYGSK PKLAGENLKL TTGKGWLNHD ETWRNYFSDI DFFPNAVYTH ENSP00000355114/1-453 ERLSACYGSK PRLAGENLKL TTGKGWLNHD ETWRNYFSDI DFFPNAVYTH ENSTTRP00000010041/1-453 ERLSACYGSK PRLAGENLKL TTGRGWLNHD ETWRSYFSDT DSFPNAVYTH bmy_05684T0/1-394 ERRSACYGSK PRLAGENLKL TTGRGWLNHD ETWRSYFSDT DSFPNAVYTH BACU006661/1-453 ERRSACYGSK PRLAGENLKL TTGRGWLNHD ETWRSYFSDT DSFPNAVYTH 451 500 ENSBTAP00000028744/1-453 CYDSSGTKLF VAGGPLPSGL HGNYAGLWS ENSP00000355114/1-453 CYDSSGTKLF VAGGPLPSGL HGNYAGLWS ENSTTRP00000010041/1-453 CYDSSGTKLF VAGGPLPSGL HGNYAGLWS bmy_05684T0/1-394 CYDSSGTKLF VAGGPLPSGL HGNYAGLWS BACU006661/1-453 CYDSSGTKLF VAGGPLPSGL HGNYAGLWS