KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:46 2014 Check: 00 .. Name: ENSP00000251496/1-1015 Len: 1019 Check: 2214 Weight: 1.00 Name: ENSBTAP00000028759/1-1018 Len: 1019 Check: 4579 Weight: 1.00 Name: ENSTTRP00000016067/1-978 Len: 1019 Check: 2679 Weight: 1.00 Name: bmy_13843T0/1-1009 Len: 1019 Check: 4509 Weight: 1.00 Name: BACU012529/1-957 Len: 1019 Check: 3299 Weight: 1.00 // 1 50 ENSP00000251496/1-1015 MGAERRLLSI KEAFRLAQQP HQNQAKLVVA LSRTYRTMDD KTVFHEEFIH ENSBTAP00000028759/1-1018 MGKEKRLLLI KEAFQLAQQP HQNQAKLVVA LNRTYGSVDD KTDFHEEFVH ENSTTRP00000016067/1-978 MGAEKRLLPI KEAFQLAQQP HQNQAKLVVA LSRTYHSVDD KTGFYEEFVN bmy_13843T0/1-1009 MGAEKRLLPI KEAFQLAQQP HQNQAKLVVA LSRTYRSVDD KTGFYEDFVH BACU012529/1-957 MGAEKRLLPI KEAFQLAQQP HQNQAKLVVA LSRTYRSVDD KTGFYEDFVH 51 100 ENSP00000251496/1-1015 YLKYVMVVYK REPAVERVIE FAAKFVTSFH QSDME-DDEE EEDGGLLNYL ENSBTAP00000028759/1-1018 YLKYAMVVYK REPAVERVIE FAAKFVTSFH QSDMENDEEE EEDGGILNYL ENSTTRP00000016067/1-978 YLKYAMVVYK REPAVERIIE FAAKFVTSFH QSDME-DDEE EEDGGILNYL bmy_13843T0/1-1009 YLKYAMVVYK REPAVERIIE FAAKFVTSFH QSDTE-DDEE EEDGGILNYL BACU012529/1-957 YLKYAMVVYK REPAVERIIE FAAKFVTSFH QSDTE-DDEE EEDGGILNYL 101 150 ENSP00000251496/1-1015 FTFLLKSHEA NSNAVRFRVC LLINKLLGSM PENAQIDDDV FDKINKAMLI ENSBTAP00000028759/1-1018 LTFLLKSHEA NSNAVRFRAC QLINKLLGNM PENAQIDDDL FDKINEAMLI ENSTTRP00000016067/1-978 LTFLLKSHEA NSNAVRFRVC QLINKLLGNM PENAQIDDDL FDKINEAMLI bmy_13843T0/1-1009 FTFLLKSHEA NSNAVRFRVC QLINKLLGNM PEDAQIDDDL FDKINEAMLI BACU012529/1-957 FTFLLKSHEA NSNAVRFRVC QLINKLLGNM PENAQIDDDL FDKINEAMLI 151 200 ENSP00000251496/1-1015 RLKDKIPNVR IQAVLALSRL QDPKDDECPV VNAYATLIEN DSNPEVRRAV ENSBTAP00000028759/1-1018 RLKDKVPNVR IQAVLALSRL QDPKDDECPV VNAYATLIEN DSNPEVRRAV ENSTTRP00000016067/1-978 RLKDKIPNVR IQAVLALSRL QDPKDDECLV VNAYATLIEN DSNPEVRRAV bmy_13843T0/1-1009 RLKDKIPNVR IQAVLALSRL QDPKDDECLV VNAYAALIEN DSNPEVRRAA BACU012529/1-957 RLKDKIPNVR IQAVLALSRL QDPKDDECLV VNAYAALIEN DSNPEVRRAA 201 250 ENSP00000251496/1-1015 LSCIAPSAKT LPKIVGRTKD VKEAVRKLAY QVLAEKVHMR AMSIAQRVML ENSBTAP00000028759/1-1018 LSCIAPSAKT LPKIVGRTKD VKETVRKLAY QVLAEKVHMR ALSIAQRVML ENSTTRP00000016067/1-978 LSCIAPSAKT LPKIVGRTKD VKEAVRKLAY QVLAEKVHMR AMSIAQRVML bmy_13843T0/1-1009 LSCIAPSAKT LPKIVGRTKD VKEAVRKLAY QVLAEKVHMR AMSIAQRVML BACU012529/1-957 LSCIAPSAKT LPKIVGRTKD VKEAVRKLAY QVLAEKVHMR ALSIAQRVML 251 300 ENSP00000251496/1-1015 LQQGLNDRSD AVKQAMQKHL LQGWLRFSEG NILELLHRLD VENSSEVAVS ENSBTAP00000028759/1-1018 LQQGLNDRSD AVKQAMQKHL LQGWLRFTEG NILELLHRLD VENSSEVAVS ENSTTRP00000016067/1-978 LQQGLNDRSD AVKQAVQKHL LQGWLRFTEG SILELLHRLD VENSSEVAVS bmy_13843T0/1-1009 LQQGLNDRSD AVKQAVQKHL LQGWLRFTEG NILELLHRLD VENSSEVAVS BACU012529/1-957 LQQGLNDRSD AVKQAVQKHL LQGWLRFTEG NILELLHRLD VENSSEVAVS 301 350 ENSP00000251496/1-1015 VLNALFSITP LSELVGLCKN NDGRKLIPVE TLTPEIALYW CALCEYLKSK ENSBTAP00000028759/1-1018 VLNALFSMTP LNELAEICKN NDGRKLIPAD TLTPEFALYW RVLCEHLKSK ENSTTRP00000016067/1-978 VLNALFSVTP LNELAEICKN NDGRKLIPAD TLTPEIALYW RVLCEYLRSK bmy_13843T0/1-1009 VLNALFSVTP LNELAEICKN NDGRKLIPAD TLTPEIALYW RVLCEYLRTK BACU012529/1-957 VLNALFSVTP LNELAEICKN NDGRKLIPAD TLTPEIALYW RVLCEYLRSK 351 400 ENSP00000251496/1-1015 GDEGEEFLEQ ILPEPVVYAD YLLSYIQSIP VVNEEHRGDF SYIGNLMTKE ENSBTAP00000028759/1-1018 GEEGEEFLEQ ILPEPVVYAE YLLSYIQSIP VVTEEQRGDF SYIGNLMTKE ENSTTRP00000016067/1-978 GDEGEEFLEQ ILPEPVVYAE YLLSYIQSIP VVNEEQRGDF SYIGNLMTKE bmy_13843T0/1-1009 GEEGEEFLEQ ILPEPVVYAE YLLSYIQSIP VVNEEQRGDF SYIGNLMTKE BACU012529/1-957 GEEGEEFLEQ LLPEPVVYAE YLLSYIQSIP VVNEEQRGDF SYIGNLMTKE 401 450 ENSP00000251496/1-1015 FIGQQLILII KSLDTSEEGG RKKLLAVLQE ILILPTIPIS LVSFLVERLL ENSBTAP00000028759/1-1018 FIGQQLILII KSLDTNEEGG RKRLLGILQE ILTLPTTPIS LISFLVERLL ENSTTRP00000016067/1-978 FIGQQLILII KFLDTNEEGG EN-------- ---------- ---------- bmy_13843T0/1-1009 FIGQQLILII KSLDTNEEGG RKRLLAILQE ILTLPTTPIS LISFLVERLL BACU012529/1-957 FIGQQLILII KSLDTNEEGG RKRLLAILQE ILTLPTTPIS LISFLVERLL 451 500 ENSP00000251496/1-1015 HIIIDDNKRT QIVTEIISEI RAPIVTVGVN NDPADVRKKE LKMAEIKVKL ENSBTAP00000028759/1-1018 HIIIDDNKRI QIVTEIISEI RAPIVTVAVN NDPADARKKE LKMAEIKVKL ENSTTRP00000016067/1-978 ---------- TDVTEIISEI RAPIVTVGVN NDPADARKKE LKMAEIKVKL bmy_13843T0/1-1009 HMILDDNKRT QIVTEIISEI RAPIVTVGVN NDPAVARKNE LKMAEIKVKL BACU012529/1-957 HMIIDDNKRT QIVSEIISEI RAPIVTVGVN NDPAVARKNE LKMAEIKVKL 501 550 ENSP00000251496/1-1015 IEAKEALENC ITLQDFNRAS ELKEEIKALE DARINLLKET EQLEIKEVHI ENSBTAP00000028759/1-1018 IEAKDSLENC ITLQDFHRAS ELKEEIKALE DAKINLLKET EQHEMKEVHI ENSTTRP00000016067/1-978 IEAKAALENC INLQDFNQAS ELKEEVKALE DAKINLLKET EQLEIKEVHI bmy_13843T0/1-1009 IEAKAALENC INLQDFNQAS ELKEEIKALE DAKINLLKET EQPEIKEVHI BACU012529/1-957 IEAKAALENC INLQDFNQAS ELKEEIKALE DAKINLLKET EQPEIKEVHI 551 600 ENSP00000251496/1-1015 EKNDAETLQK CLILCYELLK QMSISTGLSA TMNGIIESLI LPGIISIHPV ENSBTAP00000028759/1-1018 EKNDAETLQK CLILCYELLK QMSTSTGIGA TMDGIIESLI LPGIINVHPV ENSTTRP00000016067/1-978 EKNDAETLQK CLILCYELLK QMCTSTGIGA TMNGIIESLI LPGIISVHPT bmy_13843T0/1-1009 EKNDAETLQK CLILCYELLK QMCTSTGIGA TMNGIIESLI LPGIISVHPT BACU012529/1-957 EKNDAETLQK CLILCYELLK QMCTSTGIGA TMNGIIESLI LPGIISVHPT 601 650 ENSP00000251496/1-1015 VRNLAVLCLG CCGLQNQDFA RKHFVLLLQV LQIDDVTIKI SALKAIFDQL ENSBTAP00000028759/1-1018 VRNLAVLCLG CCGLQNQDFA SKHFVLLLQV LQIDDVTIKI SALKAIFDQL ENSTTRP00000016067/1-978 VRNLAVLCLG CCGLQNQDFA SKHFVLLLQV LQIDDVTIKI SALKAIFDQL bmy_13843T0/1-1009 VRNLAVLCLG CCGLQNQDFA SKHFVLLLQV LQIDDVTIKI SALKAIFDQL BACU012529/1-957 VRNLAVLCLG CCGLQNQDFA SKHFVLLLQV LQIDDVTIKI SALKAIFDQL 651 700 ENSP00000251496/1-1015 MTFGIEPFKT KKIKTLHCEG TEINSDDEQE SKEV-EETAT AKNVLKLLSD ENSBTAP00000028759/1-1018 MTFGFEPFKT KKIKATQKEG AEINSSEEQE SKESEEETAI AKNVLKLLSD ENSTTRP00000016067/1-978 MAFGFQPFKT KKIKAIQSEG AEVNTNEEQE SKESEEEADT AKNVLKLLSD bmy_13843T0/1-1009 MAFGFQPFKT KKIKAIQSEG AEVNTNEEQE SKESEEEADT AKNVLKLLSD BACU012529/1-957 MAFGFQPFKT KKIKAIQSEG AEVNTNEEQE SKESEEEADT AKNVLKLLSD 701 750 ENSP00000251496/1-1015 FLDSEVSELR TGAAEGLAKL MFSGLLVSSR ILSRLILLWY NPVTEEDVQL ENSBTAP00000028759/1-1018 FLDSEVSELR TGAAEGLAKL MFSGLLVSSR ILSHLVLLWY NPVTEEDIRL ENSTTRP00000016067/1-978 FLDSEVSELR TGAAEGLAKL MFSGLLVSSR ILSRLVLLWY NPVTEEDVRL bmy_13843T0/1-1009 FLDSEVSELR TGAAEGLAKL MFSGLLVSSR ILSRLVLLWY NPVTEEDVRL BACU012529/1-957 FLDSEVSEFR TGAAEGLAKL MFSGLLVSSR ILSRLVLLWY NPVTEEDVRL 751 800 ENSP00000251496/1-1015 RHCLGVFFPV FAYASRTNQE CFEEAFLPTL QTLANAPASS PLAEIDITNV ENSBTAP00000028759/1-1018 RHCLGVFFPM FAYASRTNQE CFEEAFLPTL QTLANAPASS PLAEIDITNV ENSTTRP00000016067/1-978 RHCLGVFFPM FAYASRTNQE CFEEAFLPTL QILANAPASS PLAEIDITNV bmy_13843T0/1-1009 RHCLGVFFPM FAYASRTNQE CFEEAFLPTL QTLANAPASS PLAEIDITNV BACU012529/1-957 RHCLGVFFPM FAYASRTNQE CFEEAFLPTL QTLANAPASS PLAEIDITNV 801 850 ENSP00000251496/1-1015 AELLVDLTRP SGLNPQAKTS QDYQALTVHD NLAMKICNEI LTSPCSPEIR ENSBTAP00000028759/1-1018 AELLVDLTRP SGLNPQAKNP PDYQALTVHD NLAMKICNEI LTCPHSPEVR ENSTTRP00000016067/1-978 AELLVDLTRP SGLNPQAKNS QDYQALTVHD NLAIKICNEI LTCPYSPEIR bmy_13843T0/1-1009 AELLVDLTRP SGLNPQAKNS QDYQALTVHD NLAIKICNEI LTCPYSPEIR BACU012529/1-957 AELLVDLTRP SGLNPQAKNS QDYQALTVHD NLAIKICNEI LTCPYSPEIR 851 900 ENSP00000251496/1-1015 VYTKALSSLE LSSHLAKDLL VLLNEILEQV KDRTCLRALE KIKIQLEKGN ENSBTAP00000028759/1-1018 VYTKALSSLE LSSDLAKDLL VVLNEILEQV KDRTCLRALE KIKIQIEKGI ENSTTRP00000016067/1-978 VYTKALSSLE LTSSLAKDLL VLLNEILEQV KDRMCVRALE KIKVQLEKGN bmy_13843T0/1-1009 VYTKALSSLE LTSSLAKDLL VLLNEILEQV KDRMCVRALE KIKVQLEKGN BACU012529/1-957 VYTKALSSLE LTSSLAKDLL VLLNEILEQV KDRMCVRALE KIKVQLEKGN 901 950 ENSP00000251496/1-1015 KEFGDQAEAA QDATLTTTTF QNEDEKNKEV YMTPLRGVKA TQASKSTQLK ENSBTAP00000028759/1-1018 KEHSDQAVAA QDDITTMTVL QSEDEKNKDV YITPVKEVKA TRM-KSTQQK ENSTTRP00000016067/1-978 KEHGDQVVAA QDDNTTTAVF QSEDENNKEV YITPVKDVKA TRM-KSTQQK bmy_13843T0/1-1009 KEHGDQVVAA QDDNTTTTVF QSEDENNKEV YITPVKDVKA TRM-KSTQQK BACU012529/1-957 KEPGDQVVAA QDDNTTTTVF QSEDENNKEV YITPVKGVKA TRM-KSTQQK 951 1000 ENSP00000251496/1-1015 TNRGQRKVTV SARTNRRCQT --AEADSESD HEVPEPESEM KMRLPRRAKT ENSBTAP00000028759/1-1018 TNRGRRKVVA SARTNRRRQT IEAEANSESD HEVPEPESEM KMRLPRRAKT ENSTTRP00000016067/1-978 TNRGRRKVIA SARTNRRRQT VEAEADSESD HEVPEPESEM KMRLPRRAKT bmy_13843T0/1-1009 TNRGRRKVIA SARTNRRRQT VEAEADSESD HEVPEPESEM KMRLPRRAKT BACU012529/1-957 TNRGNIWID- ---------- ---------- ---------- ---------- 1001 1050 ENSP00000251496/1-1015 AALEKSKLNL AQFLNEDLS ENSBTAP00000028759/1-1018 AALEKSKLNL AQFLNEDTS ENSTTRP00000016067/1-978 AALEKSKLNL A-FLSEDKN bmy_13843T0/1-1009 AALEKSKLNL A-------- BACU012529/1-957 ---------- ---------