KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:48 2014 Check: 00 .. Name: ENSBTAP00000028765/1-450 Len: 485 Check: 3604 Weight: 1.00 Name: ENSP00000357425/1-453 Len: 485 Check: 6232 Weight: 1.00 Name: BACU014273/1-421 Len: 485 Check: 2162 Weight: 1.00 Name: ENSTTRP00000000236/1-453 Len: 485 Check: 5608 Weight: 1.00 Name: bmy_15728T0/1-485 Len: 485 Check: 9967 Weight: 1.00 // 1 50 ENSBTAP00000028765/1-450 MARLGALVCC LLAAWHCRPG LGLPLAPAG- --TGPAVGQF WHVTDFHLDP ENSP00000357425/1-453 MALVRALVCC LLTAWHCRSG LGLPVAPAGG RNPPPAIGQF WHVTDLHLDP BACU014273/1-421 ---------I FSSA------ ---------- -------GQF WHVTDLHLDP ENSTTRP00000000236/1-453 MARLGALVCC LLAAWHCRPG LGLPLAPAGG PSPSPAVGQF WHVTDLHLDP bmy_15728T0/1-485 MALLGALVCC LLAAWHCRPG LGLPLAPAGG PSPSPAVGQF WHVTDLHLDP 51 100 ENSBTAP00000028765/1-450 TYHITGDHTK VCASSKGAEA SDPGPFGDVM CDSPYRLIFS ALDFIKNSGQ ENSP00000357425/1-453 TYHITDDHTK VCASSKGANA SNPGPFGDVL CDSPYQLILS AFDFIKNSGQ BACU014273/1-421 TYHITDDHTK VCASSKGANA SNPGPFGDVL CDSPYHLILS AFDFIKNSGQ ENSTTRP00000000236/1-453 TYHITDDHTK VCASSKGASA SNPGPFGDVL CDSPYHLILS AFDFIKNSGQ bmy_15728T0/1-485 TYHITDDHTK VCASSKGANA SNPGPFGDVL CDSPYHLILS AFDFIKNSGQ 101 150 ENSBTAP00000028765/1-450 KVSFMIWTGD SPPHVPVLEL STDKVINVIA NITTTIQRLF PNLQVFPALG ENSP00000357425/1-453 EASFMIWTGD SPPHVPVPEL STDTVINVIT NMTTTIQSLF PNLQVFPALG BACU014273/1-421 EASFMIWTGD SPPHVPVREL STDTVINVIA NMTTTIRILF PNLQVFPALG ENSTTRP00000000236/1-453 EASFMIWTGD SPPHVPVREL STDTVINVIA NMTTTVQSLF PNLQVFPALG bmy_15728T0/1-485 EASFMIWTGD SPPHVPVREL STDTVINVIA NMTTTVQSLF PNLQVFPALG 151 200 ENSBTAP00000028765/1-450 NHDYWP---- ---------- ---------- --------QD QLPVVNSKVY ENSP00000357425/1-453 NHDYWP---- ---------- ---------- --------QD QLPVVTSKVY BACU014273/1-421 NHDYWP---- ---------- ---------- --------QD QLPVFTSKVY ENSTTRP00000000236/1-453 NHDYWP---- ---------- ---------- --------QD QLPVFTSKVY bmy_15728T0/1-485 NHDYWPQMPN IVVTAQVIFK LIHPYIFRVS MVDYIVCGQD QLPIFTSKVY 201 250 ENSBTAP00000028765/1-450 NAVANLWKPW LTEDAITTLR KGGFYTQKVS NNPKLRIISL NTNLYYGPNS ENSP00000357425/1-453 NAVANLWKPW LDEEAISTLR KGGFYSQKVT TNPNLRIISL NTNLYYGPNI BACU014273/1-421 NAVASLWKPW LDEEAISTLR KGGFYSQKVS TNLNLRIISL NTNLYYGPNI ENSTTRP00000000236/1-453 NAVASLWKPW LDEEAISTLR KGGFYSQKVS TNLNFRIISL NTNLYYGPNI bmy_15728T0/1-485 NAVASLWKPW LDEEAISTLR KGGFYSQKVS TNLNLRIISL NTNLYYGPNI 251 300 ENSBTAP00000028765/1-450 VTLNQTDPAN QFEWLENTLN ISQQNKEKVY IIAHVPVGYL PYARGISAMR ENSP00000357425/1-453 MTLNKTDPAN QFEWLESTLN NSQQNKEKVY IIAHVPVGYL PSSQNITAMR BACU014273/1-421 VTLNKTDPAN QFEWLENTLN ICQQNKEKVY IIAHVPVGYL PYSRSMTAMR ENSTTRP00000000236/1-453 VTLNKTDPAN QFEWLENTLN ISQQNKEKVY IIAHVPVGYL PYSRSITAMR bmy_15728T0/1-485 VTLNKTDPAN QFEWLENTLN ISQQNKEKVY IIAHVPVGYL PYSRSITAMR 301 350 ENSBTAP00000028765/1-450 KYHNEKLIDI FRKYSDIIAG QFYGHTHRDS IMVLSDKKGK PVNSLFVAPA ENSP00000357425/1-453 EYYNEKLIDI FQKYSDVIAG QFYGHTHRDS IMVLSDKKGS PVNSLFVAPA BACU014273/1-421 EYYNEKLIDI FRKYSNIIAG QFYGHTHRDS IMVLSDKKGN PINSLFVAPA ENSTTRP00000000236/1-453 EYYNEKLIDI FRKYSNIIAG QFYGHTHRDS LMVLSDKKGN PINSLFVAPA bmy_15728T0/1-485 EYYNEKLIDI FRKYSNVIAG QFYGHTHRDS IMVLSDKNGN PINSLFVAPA 351 400 ENSBTAP00000028765/1-450 VTPVRSVLER LTNNPGVRLF QYDPRDYKLL DMLQYYLNLT DANLKGESNW ENSP00000357425/1-453 VTPVKSVLEK QTNNPGIRLF QYDPRDYKLL DMLQYYLNLT EANLKGESIW BACU014273/1-421 VTPVKSVLEK QTNNPGVRLF QYDPRDYKLL DVLQYYLNLT DANLKGKSNW ENSTTRP00000000236/1-453 VTPVKSVLEK QTNNPGVRLF QYDPRDYKLL DVLQYYLNLT DANLKGKSNW bmy_15728T0/1-485 VTPVKSVLEK QTNNPGVRLF QYDPRDYKLL DVLQYYLNLT DANLKGKSNW 401 450 ENSBTAP00000028765/1-450 KLEYNLTQAY DIQDLQPKSL YKLAKQFAIQ ESKQFIKYYK YFFVSYGSSV ENSP00000357425/1-453 KLEYILTQTY DIEDLQPESL YGLAKQFTIL DSKQFIKYYN YFFVSYDSSV BACU014273/1-421 KLEYNLTQAY DIEDLQPKSL YELAKQFAIL DSKQFIKYYN YFFVSYDSRV ENSTTRP00000000236/1-453 KLEYTLTQAY DIEDLQPKSL YELAKQFAIL DSKQFIKYYN YFFVSYDSRV bmy_15728T0/1-485 KLEYNLTQAY DIEDLQPKSL YELAKQFAIL DSKQFIKYYN YFFVSYDSRV 451 500 ENSBTAP00000028765/1-450 ICQGKCKIFQ ICAIMNLDVI SYTDCFRQYH MKHRL ENSP00000357425/1-453 TCDKTCKAFQ ICAIMNLDNI SYADCLKQLY IKHNY BACU014273/1-421 ICDGKCKAFQ ICAIMNLDVI SYTDCLKQYY IKHNP ENSTTRP00000000236/1-453 ICDEKCKAFQ ICAIMNLDVI SYTDCLKQYY IKHNP bmy_15728T0/1-485 ICDGKCKAFQ ICAIMNLDVI SYTDCLKQYY IKHNP