KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:36:48 2014 Check: 00 .. Name: ENSP00000304133/1-617 Len: 644 Check: 4998 Weight: 1.00 Name: ENSBTAP00000028766/1-613 Len: 644 Check: 5873 Weight: 1.00 Name: bmy_13686T0/1-641 Len: 644 Check: 5806 Weight: 1.00 Name: BACU001406/1-616 Len: 644 Check: 4818 Weight: 1.00 // 1 50 ENSP00000304133/1-617 ---------- ---------- -----MAEAK THWLGAALSL IPLIFLISGA ENSBTAP00000028766/1-613 ---------- ---------- -----MAEAK THWLGAVLSL IPLIFLLSEA bmy_13686T0/1-641 MPLQTPRPSQ QVIDAFNLQT GNLSNMAEAK THWLGAALSL IPLIFLLSEA BACU001406/1-616 ---------- ---------- -----MAEAK THWLGAALSL IPLIFLLSEA 51 100 ENSP00000304133/1-617 EAASFQRNQL LQKEPDLRLE NVQKFPSPEM IRALEYIENL RQQAHKEESS ENSBTAP00000028766/1-613 EAASFQRNQL LQKEPDLRLE NVQRFPSPEM IRALEYIEKL RQQAHKEESS bmy_13686T0/1-641 EAASFQRNQL LQKEPDIRLE NVQRFPSPEM IRALEYIEKL RQQAHKEESS BACU001406/1-616 EAASFQRNQL LQKEPEIKLE NVQRFPSPEM IRALEYIEKL RQQAHKEESS 101 150 ENSP00000304133/1-617 PDYNPYQGVS VPLQQKENGD ESHLPE--RD SLSEEDWMRI ILEALRQAEN ENSBTAP00000028766/1-613 PDYNPYQGVS VPLQQKENGD ---LPESSRD SLSEDEWMKI IAEALRQAEN bmy_13686T0/1-641 LDYNPYQGVS VLLQQKENGD ---LPESSRD SLSEDEWMKI ILEALRQAEN BACU001406/1-616 LDYNPYQGVS VPLQQKENGD ---LPESSRD SLSEDEWMKI ILEALRQAEN 151 200 ENSP00000304133/1-617 EPQSAPKENK PYALNSEKNF PMDMSDDYET QQWPERKLKH MQFPPMYEEN ENSBTAP00000028766/1-613 EPQSAPKENK PYTLNSEKNF PMDMPDDYET QQWAERKLKH MRFPPMYEEN bmy_13686T0/1-641 EPQSAPKENK PYTLNSEKNF PXDMPDDYET QQWXERKLKH MRFPPIYEEN BACU001406/1-616 EPQSAPKEIK PYTLNSEKNF PMDMPDDYET QQWPERKLKH MRFPPIYEEN 201 250 ENSP00000304133/1-617 SRDNPFKRTN EIVEEQYTPQ SLATLESVFQ ELGKLTGPNN QKRERMDEEQ ENSBTAP00000028766/1-613 SRDNPFKRTN EIVEEQYTPQ NLATLESVFQ ELGKLTGPNS QKRERADEEQ bmy_13686T0/1-641 SRDNPFKRTN EIVEEQYTPQ SLATLESVFQ ELGKLTGPNN QKRERVDEEQ BACU001406/1-616 SRDNPFKRTN EIVEEQYTPQ SLATLESVFQ ELGKLTGPNN QKRERVDEEQ 251 300 ENSP00000304133/1-617 KLYTDDEDDI YKANNIAYED VVGGEDWNPV EEKIESQTQE EVRDSKENIE ENSBTAP00000028766/1-613 KLYTDDEDDI YKANNIAYED VVGGEDWNPV EEKIESQTQE EVRDSKENAD bmy_13686T0/1-641 KLYTDDEDDI YKANNIAYED VVGGEDWNPV EEKIESQTQE EVRDSKENIE BACU001406/1-616 KLYTDDEDDI YKANNIAYED VVGGEDWNPV EEKIESQTQE EVRDSKENIE 301 350 ENSP00000304133/1-617 KNEQINDEMK RSGQLGIQEE DLRKESKDQL SDDVSKVIAY LKRLVNAAGS ENSBTAP00000028766/1-613 KTEQINDEMK RSGQLGLQDE DLRKESKDQL SDDVSKVITY LKRLVNAAGS bmy_13686T0/1-641 KNEQINDEMK RSGQLGLQDE DFQKESKDQL SDDVSKVIAY LKRLVNAAGS BACU001406/1-616 KNEQINDEMK RSGQLGLQDE DFQKESKDQL SDDVSKVIAY LKRLVNAAGS 351 400 ENSP00000304133/1-617 GRLQNGQNGE RATRLFEKPL DSQSIYQLIE ISRNLQIPPE DLIEMLKTGE ENSBTAP00000028766/1-613 GRSQNGQTGE RAIRLFEKPL DPQSIYQLIE ISRNLQIPPE DLIDMLKTGE bmy_13686T0/1-641 GRSQNGQNGE RATRLFEKPL DSQSIYQLIE ISRNLQIPPE DLIDMLKTGE BACU001406/1-616 GRSQNGQNGE RATRLFEKPL DSQSIYQLIE ISRNLQIPPE DLIDMLKTGE 401 450 ENSP00000304133/1-617 KPNGSVEPER ELDLPVDLDD ISEADLDHPD LFQNRMLSKS GYPKTPGRAG ENSBTAP00000028766/1-613 KP---VEPEQ ELEIPVEPED ISEVDLDHPD LFQNKMLSKN GYPKAPGHAV bmy_13686T0/1-641 KPNVSVEPEQ ELEIPFDPED ISEVDLDHPD LFQNKMLSKN GYPKTPGRAV BACU001406/1-616 KPNVSVEPEQ ELEIPFDPED ISEVDLDHPD LFQNKMLSKN GYPKTPGRAV 451 500 ENSP00000304133/1-617 TEALPDGLSV EDILNLLGME SAANQKTSYF PNPYNQEKVL PRLPYGAGRS ENSBTAP00000028766/1-613 AEALSEGLSV EDILNLLGME SAANPKPPYF PNQYNREKVL SRLPYGPGRS bmy_13686T0/1-641 AEALPDGLSV EDILNLLGME NAANQKPPYF PNQYNQEKVL SRLPYGPGRS BACU001406/1-616 AEALPDGLSV EDILNLLGME NAANQKPPYF PNQYNREKVL SRLPYGPGRS 501 550 ENSP00000304133/1-617 RSNQLPKAAW IPHVENRQMA YENLNDKDQE LGEYLARMLV KYPEIINSNQ ENSBTAP00000028766/1-613 KANQLPKAVW MPDVENRQMA YENLNDKDQE LGEYLARMLV KYPEIMNANP bmy_13686T0/1-641 KANQLPKAVW MPDVENRQMA YENLNDKDQE LGEYLAKMLV KYPEIMNSNQ BACU001406/1-616 KVNQLPKAVW MPDVENRQMA YENLNDKDQE LGEYLAKMLV KYPEIMNSNQ 551 600 ENSP00000304133/1-617 VKRVPGQGSS EDDLQEEEQI EQAIKEHLNQ GSSQETDKLA PVSKRFPVGP ENSBTAP00000028766/1-613 AKRVPSQGST EDDRQDENQI EQALKEHLSQ HSSQETDKLA SVSKRLPVGT bmy_13686T0/1-641 VKRVPSQGSS EDDLQEENQI EQALKERLNQ HSSQETDKLA SVSKRLPVGS BACU001406/1-616 VKRVPSQGSS EDDLQEENQI EQALKERLNQ HSSQETDKLA SVSKRLPVGS 601 650 ENSP00000304133/1-617 PKNDDTPNRQ YWDEDLLMKV LEYLNQEKAE KGREHIAKRA MENM ENSBTAP00000028766/1-613 PKSDDTPNRP YLDEDLLVKV LEYLNQEKAE KGREHIAKRA MENM bmy_13686T0/1-641 PKNDDTPNRQ YLDEDLLMKV LEYLNQEKAE KGREHIAKRA MENM BACU001406/1-616 PKSDDTPNRQ YLDEDLLMKV LEYLNQEKAE KGREHIAKRA MENM