KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:51 2014 Check: 00 .. Name: ENSTTRP00000009431/1-639 Len: 645 Check: 3071 Weight: 1.00 Name: ENSP00000271277/1-639 Len: 645 Check: 8963 Weight: 1.00 Name: ENSBTAP00000028787/1-639 Len: 645 Check: 3365 Weight: 1.00 Name: bmy_18852T0/1-576 Len: 645 Check: 2246 Weight: 1.00 Name: BACU002702/1-585 Len: 645 Check: 7849 Weight: 1.00 // 1 50 ENSTTRP00000009431/1-639 MNLEKLSKPE LLTLFSILEG ELEARDLVIE ALKAQHRDTF IEERYGKYNI ENSP00000271277/1-639 MNLEKLSKPE LLTLFSILEG ELEARDLVIE ALKAQHRDTF IEERYGKYNI ENSBTAP00000028787/1-639 MNLEKLSKPE LLTLFSILEG ELEARDLVIE ALKAQHRDTF IEERYGKYNI bmy_18852T0/1-576 ---------- ---------- ---------- ---------- ---------- BACU002702/1-585 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000009431/1-639 SDPLMALQRD FETLKEKNDG EKQPVCTNPL SILKVVMKQC KNMQERMLSQ ENSP00000271277/1-639 SDPLMALQRD FETLKEKNDG EKQPVCTNPL SILKVVMKQC KNMQERMLSQ ENSBTAP00000028787/1-639 SDPLMALQRD FETLKEKNDG EKQPVCTNPL SILKVVMKQC KNMQERMLSQ bmy_18852T0/1-576 ----MALQRD FETLKEKNDG EKQPVCTNPL SILKVVMKQC KNMQERMLSQ BACU002702/1-585 ----MALQRD FETLKEKNDG EKQPVCTNPL SILKVVMKQC KNMQERMLSQ 101 150 ENSTTRP00000009431/1-639 LAAAESRHRK VILDLEEERQ RHAQDTAEGD DVTYMLEKER ERLTQQLEFE ENSP00000271277/1-639 LAAAESRHRK VILDLEEERQ RHAQDTAEGD DVTYMLEKER ERLTQQLEFE ENSBTAP00000028787/1-639 LAAAESRHRK VILDLEEERQ RHAQDTAEGD DVTYMLEKER ERLTQQLEFE bmy_18852T0/1-576 LAAAESRHRK VILDLEEERQ RHAQDTAEGD D--------- ------LEFE BACU002702/1-585 LAAAESRHRK VILDLEEERQ RHAQDTAEGD DVTYMLEKER ERLTQQLEFE 151 200 ENSTTRP00000009431/1-639 KSQVKKFEKE QKKLSSQLEE ERSRHKQLSS MLVRECKKAT NKAAEEGQKA ENSP00000271277/1-639 KSQVKKFEKE QKKLSSQLEE ERSRHKQLSS MLVLECKKAT NKAAEEGQKA ENSBTAP00000028787/1-639 KSQVKKFEKE QKKLSSQLEE ERSRHKQLSS MLVRECKKAT SKAAEEGQKA bmy_18852T0/1-576 KSQVKKFEKE QKKLSSQLEE ERSRHKQLSS MLVRECKKAT NKAAEEGQKA BACU002702/1-585 KSQVKKFEKE QKKLSSQLEE ERSRHKQLSS MLVRECKKAT NKAAEEGQKA 201 250 ENSTTRP00000009431/1-639 GELSLKLEKE KSRVSKLEEE LAAERKRGLQ TEAQVEKQLS EFDIEREQLR ENSP00000271277/1-639 GELSLKLEKE KSRVSKLEEE LAAERKRGLQ TEAQVEKQLS EFDIEREQLR ENSBTAP00000028787/1-639 GELSLKLEKE KSRVSKLEEE LAAERKRGLQ TEAQVEKQLS EFDIEREQLR bmy_18852T0/1-576 GELSLKLEKE KSRVSKLEEE LAAERKRGLQ TEAQVEKQLS EFDIEREQLR BACU002702/1-585 GELSLKLEKE KSRVSKLEEE LAAERKRGLQ TEAQVEKQLS EFDIEREQLR 251 300 ENSTTRP00000009431/1-639 AKLNREENRT RTLKEEMESL KKIVKDLEAL HQQSSPSAQV KKPVTLSKGT ENSP00000271277/1-639 AKLNREENRT KTLKEEMESL KKIVKDLEAS HQHSSPNEQL KKPVTVSKGT ENSBTAP00000028787/1-639 AKLNREENRT RTLKEEMESL KKVVKNLEAL HQQSGPSEQV KKPVTVSKGT bmy_18852T0/1-576 AKLNREENRT RTLKEEMESL KKIVKDLEAL HQQSSPGEQG KKPVTLSKGT BACU002702/1-585 AKLNREENRT RTLKEEMESL KKIVKDLEAL HQQSSPGEQG KKPVTLSKGT 301 350 ENSTTRP00000009431/1-639 ATEPPVLVSV FCQTESFQAE RTHGSSXXXX ------XXXX XXXXXXXXXX ENSP00000271277/1-639 ATEPLMLMSV FCQTESFPAE RTHGSNIAKM ------TNTG LPGPATPAYS ENSBTAP00000028787/1-639 VTEPPTLVSA FCQTESFQAE KTHGSSTARV ------TTSE LPGPTTPTYS bmy_18852T0/1-576 ATEPPVLVSV FCQTESFQAE RTHGSSTAKV TATGLPTATG LPGPTTPAYS BACU002702/1-585 ATEPPVLVSV FCQTESFQAE RTHGSSTAKV ------TATG LPGPTTPAYS 351 400 ENSTTRP00000009431/1-639 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000271277/1-639 YAKTNGHCDP EIQTTRELTA GNNVENQVPP REKSVALAQE KPVENGGCPV ENSBTAP00000028787/1-639 YAKTNGHFDP EMQTTKELIA GSNVENQVPP REKPVELTQE KAVENGGCPV bmy_18852T0/1-576 YAKTNGHFDP EMQTTKELIT GSSVENQAPP REKPVGLAQE KAVENGGCPV BACU002702/1-585 YAKTNGHFDP EMQTTKELIT GSSVENQAPP REKPVGLAQE KAVENGGCPV 401 450 ENSTTRP00000009431/1-639 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000271277/1-639 GIETPVPMPS PLSSSGSSLS PSSTASSSLT SSPCSSPVLT KRLLGSSASS ENSBTAP00000028787/1-639 GIETPGPAPS HLPSSGSSPS PSSTASSSLT SSPCSSPVLT KRLLGSSASS bmy_18852T0/1-576 GIETPVPAPG HLPSSGSSLS PSSTASSSLT SSPCSSPVLT KRLLGSSASS BACU002702/1-585 GIETPVPAPG HLPSSGSSLS PSSTASSSLT SSPCSSPVLT KRLLGSSASS 451 500 ENSTTRP00000009431/1-639 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000271277/1-639 PGYQSSYQVG INQRFHAARH KFQSQADQDQ QASGLQSPPS RDLSPTLIDN ENSBTAP00000028787/1-639 PGYQSSYQVG INQRFHAARH KFQSQADQDQ QASGLQSPPS RDLSPTLIDN bmy_18852T0/1-576 PGYQSSYQVG INQRFHAARH KFQSQADQDQ QASGLQSPPS RDLSPTLIDN BACU002702/1-585 PGYQSSYQVG INQRFHAARH KFQSQADQDQ QASGLQSPPS RDLSPTLIDN 501 550 ENSTTRP00000009431/1-639 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000271277/1-639 SAAKQLARNT VTQVLSRFTS QQGPIKPVSP NSSPFGTDYR NLANTANPRG ENSBTAP00000028787/1-639 SAAKQLARNT VTQVLSRFTN QQGPIKPVSP NSSPFGTDYR NLASTVNARG bmy_18852T0/1-576 SAAKQLARNT VTQVLSRFTS QQGPIKPVSP NSSPFGTDYR NLANTASPRG BACU002702/1-585 SAAKQLARNT VTQVLSRFTS QQGPIKPVSP NSSPFGTDYR NLANTASPRG 551 600 ENSTTRP00000009431/1-639 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000271277/1-639 DTSHSPTPGK VSSPLSPLSP GIKSPTIPRA ERGNPPPIPP KKPGLTPSPS ENSBTAP00000028787/1-639 DTNHSPTPGK GSSPLSPLSP GIKSPTIPRA ERGNPPPIPP KKPGLTPSPS bmy_18852T0/1-576 DSSHSPTPGK VSSPLSPLSP GIKSPTIPRA ERGNPPPIPP KKPGLAPSPS BACU002702/1-585 DSSHSPTPGK VSSPLSPLSP GIKSPTIPRA ERGNPPPIPP KKPGLAPSPS 601 650 ENSTTRP00000009431/1-639 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXGKDVEIL LRTSS ENSP00000271277/1-639 ATTPLTKTHS QAASLTTAED LASSCSSNTV VANGKDVELL LPTSS ENSBTAP00000028787/1-639 TTTPLTKTHS QASSLTTAED LGSSCSSNAV VANGKDVEIL LPTSS bmy_18852T0/1-576 AATPPSKPHP QASSLTTTED LASSCSSNAV VANGKDVEIL LPTSS BACU002702/1-585 AATPLSKPHP QASSLTTTED LASSCSSNAV VANGKDVEIL LPTSS