KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:53 2014 Check: 00 .. Name: ENSP00000166139/1-263 Len: 278 Check: 1614 Weight: 1.00 Name: ENSTTRP00000010756/1-262 Len: 278 Check: 8011 Weight: 1.00 Name: ENSBTAP00000028801/1-261 Len: 278 Check: 5523 Weight: 1.00 Name: bmy_06638T0/1-267 Len: 278 Check: 7094 Weight: 1.00 Name: BACU006544/1-157 Len: 278 Check: 4270 Weight: 1.00 // 1 50 ENSP00000166139/1-263 ---------M RPGAPGPLWP LPWGALAWAV GFVSSMGSGN PAPGGVCWLQ ENSTTRP00000010756/1-262 ---------M RPGAPGPLWP LPWGALAWAV GFVGSVGSGD PAPGGVCWLQ ENSBTAP00000028801/1-261 ---------M RPRAPGPLWP LPWGALAWAV GFVGSLGSGD PAPGGVCWLQ bmy_06638T0/1-267 RHGRQLAGRP RPGCGEGHWR APLA--TWEL ARLSA----- ---GGVCWLQ BACU006544/1-157 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000166139/1-263 QGQEATCSLV LQTDVTRAEC CASGNIDTAW SNLTHPGNKI NLLGFLGLVH ENSTTRP00000010756/1-262 QGREATCSLV LRTDVSQAEC CASGNIDTAW SNFTHPGNKI SLLGFLGLVH ENSBTAP00000028801/1-261 QGREATCSLV LKTDVSQAEC CASGNIDTAW SNFTHPGNKI SLLGFLGLVH bmy_06638T0/1-267 QGREATCSLV LRTDVSQAEC CASGNIDTAW SNFTHPGNKI SLLGFLGLVH BACU006544/1-157 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000166139/1-263 CLPCKDSCDG VECGPGKACR MLGGRPRCEC APDCSGLPAR LQVCGSDGAT ENSTTRP00000010756/1-262 CLPCKDSCEG VACGPGKACR MLGGRPRCEC APDCSGLPAR LQVCGSDGAT ENSBTAP00000028801/1-261 CLPCKDSCEG VECGPGKACR MLGGRPRCEC APDCTGLPAR LQVCGSDGAT bmy_06638T0/1-267 CLPCKDSCEG VECGPGKACR MLGGRPRCEC APDCSGLPAR LQVCGSDGAT BACU006544/1-157 ---------- ---------- MLGGRPRCEC APDCSGLPAR LQVCGSDGAT 151 200 ENSP00000166139/1-263 YRDECELRAA RCRGHPDLSV MYRGRCRKSC EHVVCPRPQS CVVDQTGSAH ENSTTRP00000010756/1-262 YRDECELRAA RCRGHPDLRV MYRGRCRKSC AHVVCLRPQS CVVDQTGSAH ENSBTAP00000028801/1-261 YRDECELRAA RCRGHPDLRV MYRGRCRKSC AHVVCLRPQS CVVDQTGSAH bmy_06638T0/1-267 YRDECELRAA RCRGHPDLRV MYRGRCRKSC AHVVCLRPQS CVVDQTGSAH BACU006544/1-157 YRDECELRSA RCSGHPDLRV MYQGRCRKSC AHVVCLRPQS CVVDQTGSAH 201 250 ENSP00000166139/1-263 CVVCRAAPCP VPSSPGQELC GNNNVTYISS CHMRQATCFL GRSIGVRHAG ENSTTRP00000010756/1-262 CVVCRAAPCP APSSPGQELC GNNNVTYMSS CHLRQATCFL GRSIGVRHPG ENSBTAP00000028801/1-261 CVVCRAAPCP APSSPGQELC GNNNVTYLSS CHLRQATCFL GRSIGVRHPG bmy_06638T0/1-267 CVVCRAAPCP APSSPGQELC GNNNVTYMSS CHLRQATCFL GRSIGVRHPG BACU006544/1-157 CVVCRAAPCP APSSPGQELC GNNNVTYMSS CHLRQATCFL GRSIGVRHPG 251 300 ENSP00000166139/1-263 SCAGTPEEPP GGES------ AEEEENFV ENSTTRP00000010756/1-262 SCAGTP-EPL DAES------ EEDEENFV ENSBTAP00000028801/1-261 SCAGTP-EPL DPES------ -EEEENFV bmy_06638T0/1-267 SCAGTP-EPL DAESEEEEEE EEEEENFV BACU006544/1-157 SCAGTP-EPL DAESEEEEEE EEEEENFV