KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:54 2014 Check: 00 .. Name: ENSTTRP00000011918/1-319 Len: 412 Check: 7357 Weight: 1.00 Name: ENSP00000220058/1-389 Len: 412 Check: 3964 Weight: 1.00 Name: ENSBTAP00000028820/1-390 Len: 412 Check: 5744 Weight: 1.00 Name: bmy_12712T0/1-390 Len: 412 Check: 9808 Weight: 1.00 Name: BACU001061/1-392 Len: 412 Check: 7130 Weight: 1.00 // 1 50 ENSTTRP00000011918/1-319 ---------- ---------- ---------- ---------- ---------- ENSP00000220058/1-389 MRVLVRRCWG P-PLAHGARR G-RPSPQWRA LARL----GW EDCRDSRVRE ENSBTAP00000028820/1-390 MRVLLRCCCG HLPVGGG--A GRRSNPRWRA LARLSASPGW EDGQGARVRE bmy_12712T0/1-390 MRLLVRCCWG PLPGGGG-CA GRRQSPQWRS LLGLSGSSGG EDGRGARVRE BACU001061/1-392 MRVPVRCCWG PLPGGGGGCA GRRQSPQWRS LVGLSGSSGG EDGRGARVRE 51 100 ENSTTRP00000011918/1-319 ---------- ---------- ------ENKG EELIENLEVV TVPSPSPKRL ENSP00000220058/1-389 KPPWRVLFFG TDQFAREALR ALHAARENKE EELIDKLEVV TMPSPSPKGL ENSBTAP00000028820/1-390 KPPWRVLFFG NDQFARETLR ALHAARENKE EELIEKLEVV TVPSPSPKGL bmy_12712T0/1-390 KPPWRVLFFG TDQFARETLR ALHAARENKG EELIENLEVV TVPSPSPKRL BACU001061/1-392 KPPWRVLFFG TDQFARETLR ALHAARENKG EELIDNLEVV TVPSPSPKRL 101 150 ENSTTRP00000011918/1-319 PVKQYAVQSQ LPVYEWPDVG SGEYDVGVVA SFGRLLSEAL ILKFPXXXXX ENSP00000220058/1-389 PVKQYAVQSQ LPVYEWPDVG SGEYDVGVVA SFGRLLNEAL ILKFPYGILN ENSBTAP00000028820/1-390 PVKQYAVQSQ LPVYEWPDVG SGEYDVGVVA SFGRLLSEAF ILKFPYGILN bmy_12712T0/1-390 PVKQYAVQSQ LPVYEWPDVG SGEYDVGVVA SFGRLLSEAL ILKFPYGILN BACU001061/1-392 PVKQYAVQSQ LPVYEWPDVG SGEYDVGVVA SFGRLLSEAL ILKFPYGVLN 151 200 ENSTTRP00000011918/1-319 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXFDV GPILKQETVP ENSP00000220058/1-389 VHPSCLPRWR GPAPVIHTVL HGDTVTGVTI MQIRPKRFDV GPILKQETVP ENSBTAP00000028820/1-390 VHPSCLPRWR GPAPIIHTIL HGDTIAGVTI MQIKPRRFDV GPILKQETVP bmy_12712T0/1-390 VHPSCLPRWR GPAPIIHTVL HGDTVAGVTI MQIRPKRFDV GPILKQETVP BACU001061/1-392 VHPSCLPRWR GPAPIIHTVL HGDTVAGVTI MQIRPKRFDV GPILKQETVP 201 250 ENSTTRP00000011918/1-319 VPPKSTTKDL EAVLSRLGAN MLITVLKTLP ESLNNGRQQP AEGVTHXXXX ENSP00000220058/1-389 VPPKSTAKEL EAVLSRLGAN MLISVLKNLP ESLSNGRQQP MEGATYAPKI ENSBTAP00000028820/1-390 VPPKSTSKEL EAVLSRLGAN MLISVLKNLP ESLNNGRQQP AEGVTHAPKI bmy_12712T0/1-390 VPPKSTTKDL EAVLSRLGAN MLISILKNLP ESLNNGRQQP AEGVTH---- BACU001061/1-392 VPPKSTTKDL EAVLSRLGAN MLISILKNLP ESLNNGRQQP AEGVTHAPKI 251 300 ENSTTRP00000011918/1-319 XXXXXXIKWE EQTSEQIVRL HRAIGNI--- ---------- ----IPLQTL ENSP00000220058/1-389 SAGTSCIKWE EQTSEQIFRL YRAIGNI--- ---------- ----IPLQTL ENSBTAP00000028820/1-390 SAATSCIKWE EQTSEQIFRL YRAVGNI--- ---------- ----IPLQTL bmy_12712T0/1-390 ---------- ----EQIFRL HCAIGNICSD DKVKMSFTSS RTRRIPLQTL BACU001061/1-392 SAATSCIKWE EQTSEQIFRL HRAIGNI--- ---------- ----IPLQTL 301 350 ENSTTRP00000011918/1-319 WMNSTIKLLD VVEVNSSVLT DPKLTGQAVI PGSVIYHRQS QILLVCCKDG ENSP00000220058/1-389 WMANTIKLLD LVEVNSSVLA DPKLTGQALI PGSVIYHKQS QILLVYCKDG ENSBTAP00000028820/1-390 WMDNTIKLLD LVEVDNSILS DSKLTGQAVI PGSVIYHKQS QILLVCCKDD bmy_12712T0/1-390 WVNSTIKLLD LVEVNSSVLT DPKLTGQAVI PGSVIYHRQS QILLVCCKDG BACU001061/1-392 WVNSTIKLLD LVEVNSSVLT DPKLTGQAVI PGSVIYHKQS QILLVCCKDG 351 400 ENSTTRP00000011918/1-319 WIGVRSVMLK KTLTATDFYN GYLHPWYQKN SLAQPSQCRF QTLRLPLKKK ENSP00000220058/1-389 WIGVRSVMLK KSLTATDFYN GYLHPWYQKN SQAQPSQCRF QTLRLPTKKK ENSBTAP00000028820/1-390 WIGVRSVMLK KTLTATDFYN GYLHPWYQKN SQAQPSQCRF QTLRLPPKKK bmy_12712T0/1-390 WIGVRSVMLK KTLTATDFYN GYLHPWYQNN SQAQPSQCRF QTLRLPLKKK BACU001061/1-392 WIGVRSVMLK KTLTATDFYN GYLHPWYQKN SQAQPSQCRF QTLRLPLKKK 401 450 ENSTTRP00000011918/1-319 QEKKIVAMQC TK ENSP00000220058/1-389 QKKTVAMQQC IE ENSBTAP00000028820/1-390 QKKKIVAMQ- -- bmy_12712T0/1-390 QKKKIVAVQ- -- BACU001061/1-392 QKKKIVAVQ- --