KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:36:55 2014 Check: 00 .. Name: ENSTTRP00000008726/1-628 Len: 636 Check: 1546 Weight: 1.00 Name: ENSP00000376765/1-628 Len: 636 Check: 5820 Weight: 1.00 Name: bmy_13822T0/1-636 Len: 636 Check: 8856 Weight: 1.00 Name: ENSBTAP00000028829/1-628 Len: 636 Check: 6436 Weight: 1.00 // 1 50 ENSTTRP00000008726/1-628 MAELGELKHM VMSFRVSELQ VLLGFAGRNK SGRKHELLAK ALHLLKSSCA ENSP00000376765/1-628 MAELGELKHM VMSFRVSELQ VLLGFAGRNK SGRKHELLAK ALHLLKSSCA bmy_13822T0/1-636 MAELGELKHM VMSFRVSELQ VLLGFAGRNK SGRKHELLAK ALHLLKSSCA ENSBTAP00000028829/1-628 MAELGELKHM VMSFRVSELQ VLLGFAGRNK SGRKHELLAK ALHLLKSSCA 51 100 ENSTTRP00000008726/1-628 PSVQMKIKEL YRRRFPRKTL GPSDLSLLSL PPGTPPVGSP GPLAPIPPAL ENSP00000376765/1-628 PSVQMKIKEL YRRRFPRKTL GPSDLSLLSL PPGTSPVGSP GPLAPIPPTL bmy_13822T0/1-636 PSVQMKIKEL YRRRFPRKTL GPSDLSLLSL PPGTPPVGSP GPLAPIPPAL ENSBTAP00000028829/1-628 PSVQMKIKEL YRRRFPRKTL GPSDLSLLSL PPGTPPVGSP GPLAPIPPAL 101 150 ENSTTRP00000008726/1-628 LAPGTLLGPK REVDMHPPLP QPVHPDVTMK PLPFYEIYGE LIRPTTLAST ENSP00000376765/1-628 LAPGTLLGPK REVDMHPPLP QPVHPDVTMK PLPFYEVYGE LIRPTTLAST bmy_13822T0/1-636 LAPGTLLGPK REVDMHPPLP QPVHPDVTMK PLPFYEIYGE LIRPTTLAST ENSBTAP00000028829/1-628 LAPGTLLGPK REVDMHPPLP QPVHPDVTMK PLPFYEIYGE LIRPTTLAST 151 200 ENSTTRP00000008726/1-628 SSQRFEEAHF TFALTPQQVQ QILTSREVLP GAKCDYTIQV QLRFCLCETS ENSP00000376765/1-628 SSQRFEEAHF TFALTPQQVQ QILTSREVLP GAKCDYTIQV QLRFCLCETS bmy_13822T0/1-636 SSQRFEEAHF TFALTPQQVQ QILTSREVLP GAKCDYTIQV QLRFCLCETS ENSBTAP00000028829/1-628 SSQRFEEAHF TFALTPQQVQ QILTSREVLP GAKCDYTIQV QLRFCLCETS 201 250 ENSTTRP00000008726/1-628 CPQEDYFPPN LFVKVNGKLC PLPGYLPPTK NGAEPKRPSR PINITPLARL ENSP00000376765/1-628 CPQEDYFPPN LFVKVNGKLC PLPGYLPPTK NGAEPKRPSR PINITPLARL bmy_13822T0/1-636 CPQEDYFPPN LFVKVNGKLC PLPGYLPPTK NGAEPKRPSR PINITPLARL ENSBTAP00000028829/1-628 CPQEDYFPPN LFVKVNGKLC PLPGYLPPTK NGAEPKRPSR PINITPLARL 251 300 ENSTTRP00000008726/1-628 SATVPNTIVV NWSSEFGRNY SLSVYLVRQL TAGTLLQKLR AKGIRNPDHS ENSP00000376765/1-628 SATVPNTIVV NWSSEFGRNY SLSVYLVRQL TAGTLLQKLR AKGIRNPDHS bmy_13822T0/1-636 SATVPNTIVV NWSSEFGRNY SLSVYLVRQL TAGTLLQKLR AKGIRNPDHS ENSBTAP00000028829/1-628 SATVPNTIVV NWSSEFGRNY SLSVYLVRQL TAGTLLQKLR AKGIRNPDHS 301 350 ENSTTRP00000008726/1-628 RALXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000376765/1-628 RALIKEKLTA DPDSEVATTS LRVSLMCPLG KMRLTVPCRA LTCAHLQSFD bmy_13822T0/1-636 RALIKEKLTA DPDSEVATTS LRVSLMCPLG KMRLTVPCRA LTCAHLQSFD ENSBTAP00000028829/1-628 RALIKEKLTA DPDSEVATTS LRVSLMCPLG KMRLTVPCRA LTCAHLQSFD 351 400 ENSTTRP00000008726/1-628 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXLFMEILNS CSDCDEIQFM ENSP00000376765/1-628 AALYLQMNEK KPTWTCPVCD KKAPYESLII DGLFMEILSS CSDCDEIQFM bmy_13822T0/1-636 AALYLQMNEK KPTWTCPVCD KKAPYESLII DGLFMEILNS CSDCDEIQFM ENSBTAP00000028829/1-628 AALYLQMNEK KPTWTCPVCD KKAPYESLII DGLFMEILNS CSDCDEIQFM 401 450 ENSTTRP00000008726/1-628 EDGSWCPMKP KKEASEVCPP PGYGLD---- ----GLQYSP VQEGNPSENK ENSP00000376765/1-628 EDGSWCPMKP KKEASEVCPP PGYGLD---- ----GLQYSP VQGGDPSENK bmy_13822T0/1-636 EDGSWCPMKP KKEASEVCPP PGYGLDDAVF LPTTGLQYSP VQEGNPSENK ENSBTAP00000028829/1-628 EDGSWCPMKP KKEASEVCPP PGYGLD---- ----GLQYSP VQEGNPSESK 451 500 ENSTTRP00000008726/1-628 KKVEVIDLTI ESSSDEEDLP PTKKHCPVTS AAIPALPGSK GILTSGHQPS ENSP00000376765/1-628 KKVEVIDLTI ESSSDEEDLP PTKKHCSVTS AAIPALPGSK GVLTSGHQPS bmy_13822T0/1-636 KKVEVIDLTI ESSSDEEDLP PTKKHCPVTS AAIPALPGSK GVLTSGHQPS ENSBTAP00000028829/1-628 KKVEVIDLTV ESSSDEEDLP PTKKHCPVTS AAIPALPGSK GVLTSGHQPS 501 550 ENSTTRP00000008726/1-628 SVLRSPAMGT LGGDFLSSLP LHEYPPAFPL GADIQGLDLF SFLQTESQHY ENSP00000376765/1-628 SVLRSPAMGT LGGDFLSSLP LHEYPPAFPL GADIQGLDLF SFLQTESQHY bmy_13822T0/1-636 SVLRSPAMGT LGGDFLSSLP LHEYPPAFPL GADIQGLDLF SFLQTESQHY ENSBTAP00000028829/1-628 SVLRSPAMGT LGGDFLSSLP LHEYPPAFPL GADIQGLDLF SFLQTESQHY 551 600 ENSTTRP00000008726/1-628 GPSVITSLDE QDALGHFFQY RGTPSHFLGP LGPTLGSSHR STTPAPPPGR ENSP00000376765/1-628 GPSVITSLDE QDALGHFFQY RGTPSHFLGP LAPTLGSSHC SATPAPPPGR bmy_13822T0/1-636 GPSVITSLDE QDALGHFFQY RGTPSHFLGP LGPTLGSSHR STTPAPPPGR ENSBTAP00000028829/1-628 GPSVITSLDE QDALGHFFQY RGTPSHFLGP LTPTLGSSHR SATPAPPPGR 601 650 ENSTTRP00000008726/1-628 VSSIVAPGGN LREGHGGPLP SGPSLTGCRS DIISLD ENSP00000376765/1-628 VSSIVAPGGA LREGHGGPLP SGPSLTGCRS DIISLD bmy_13822T0/1-636 VSSIVAPGGN LREGHGGPLP SGPSLTGCRS DIISLD ENSBTAP00000028829/1-628 VSSIVAPGGT LREGHGGPLP SGPSLTGCRS DIISLD