KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:55 2014 Check: 00 .. Name: ENSP00000334437/1-328 Len: 332 Check: 4312 Weight: 1.00 Name: ENSTTRP00000008732/1-328 Len: 332 Check: 9833 Weight: 1.00 Name: ENSBTAP00000028830/1-302 Len: 332 Check: 5491 Weight: 1.00 Name: bmy_13821T0/1-293 Len: 332 Check: 8153 Weight: 1.00 Name: BACU019551/1-320 Len: 332 Check: 2992 Weight: 1.00 // 1 50 ENSP00000334437/1-328 MAEVRVQLLL SRRPESVSFA RSVCGLLGAG PGLGTWPIHC SLKRGRLVLS ENSTTRP00000008732/1-328 MAAARV-LLL SGRPESVSFA QSVCGLLGAG PGLGPWPTYC GLKRGELVLS ENSBTAP00000028830/1-302 MAAARVLLLL SGRPESVSFA QSVCGLLGAG SGLGPWPTHC GLKRGQLVLS bmy_13821T0/1-293 MAAARV--LL SGRPESVSFA QSVCGLLGAG PGLGPWPTYC GLKRGQLVLS BACU019551/1-320 MAAARV--LL SGRPESVSFA QSVCGLLGAG PGLGPWPTYC GLKRGQLVLS 51 100 ENSP00000334437/1-328 SRPFPGASAR LPLQRPPFCP FAALEERPRV PGAELPTD-R GVDLGVAVIL ENSTTRP00000008732/1-328 DRPFPGASAR LPLQRPPFCP FSALDQQPRA PGAELPTN-R GVDLAVAVVL ENSBTAP00000028830/1-302 DKPFPGASAR LPLQRPPFCP FAALDQQPRA PGVELPPKGR GVDLGVAVIL bmy_13821T0/1-293 DRPFPGASAR LPLQRPPFCP FPALDQQPRA PGAELPTN-R GVDLAVAVVL BACU019551/1-320 DRPFPGASAR LPLQRPPFCP FPALDQQPRA PGAELPTN-R GVDLAVAVVL 101 150 ENSP00000334437/1-328 QSSDKTVLLT RRARTLSVSP NLWVPPGGHV ELEEELLDGG LREL-WEESG ENSTTRP00000008732/1-328 QSSDQTVLLT RRTQTLNVSP NLWVPPGGHV EPDEEXXXXX XXXX-XXXXX ENSBTAP00000028830/1-302 QSSDQTVLLT RRTSTLNISP NLWVPPGGHV EPDEELLDGG LREL-WEESG bmy_13821T0/1-293 QSSDQTVLLT RRTRTLNVSP NLWVPPGGHV EPDEELLDGG LREL-WEESG BACU019551/1-320 QSSDQTVLLT RRTRTLNVSP NLWVPPGGHV EPDEEVANPL TQPAPCPEGG 151 200 ENSP00000334437/1-328 LHLPQGQFSW VPLGLWESAY PPRLSWGLPK YHHIVLYLLV ISQESQQQLQ ENSTTRP00000008732/1-328 XXXXXXXXXX XXXXXXXSAY PPRLSWGLPK YHHIILYLLV ISQESQQQLQ ENSBTAP00000028830/1-302 LQLPQGQFSW VPLGLWESAY PPKLSWGLPK YHHIVLYLLV ISQESQQQLQ bmy_13821T0/1-293 LQLPQGQFFW VPLGLWESAY PPRLSWGLPK YHHIILYLLV ISQESQQQLQ BACU019551/1-320 TTLGTGGSSH --FCCFLSAY PPRLSWGLPK YHHIILYLLV ISQESQQQLQ 201 250 ENSP00000334437/1-328 ARIQPNPNEV SALMWLTPDV AAAVAAAEDG TETPGLLPQD LPPSVLAVEL ENSTTRP00000008732/1-328 ARIQPNPREV SALMWLGPDV AAAVAATEDG TETPRHLPQD LPPSVLAVEL ENSBTAP00000028830/1-302 ARIQPNAGEV SAFMWLGPDI AAAVAATEDG TETPKHLPQD LPSSVPTVEL bmy_13821T0/1-293 ARIQPNPREV SALMWLGPDV AAAVAATEDG TETPRHLPQD LPPSVLAVEL BACU019551/1-320 ARIQPNPREV SALMWLGRDV AAAVAATEDG TETPRHLPQD LPPSVLAVEL 251 300 ENSP00000334437/1-328 EEDGRARPLV LHMSTLLRMI PTMAEDKERV STGTKFALKL WLQHLGR-TP ENSTTRP00000008732/1-328 EENGGARPLV LPTSTLLRTT PATADSKERV STGTKFALRL WLQHLGR-TP ENSBTAP00000028830/1-302 KENGGAQPLA LPTSTLLRTT PGTADSRERV STGTKFALTL WLQHLGR--- bmy_13821T0/1-293 EENGGARPLV LPTSTLLRTT PATADSKERV STGTKFALRL WLQHLGR--- BACU019551/1-320 EENGGARPLV LPTSTLLRTT PATADSKERV STGTKFALRL WLQHLGSVTP 301 350 ENSP00000334437/1-328 PPCKSAAYLD PGPAKEEWNM DPLPPNQGSG K- ENSTTRP00000008732/1-328 LPCGSGAHSD PGPAREEQNV AHPTPNQGSG KQ ENSBTAP00000028830/1-302 -KSRDGS--- ---------- ---------- -- bmy_13821T0/1-293 ---------- ---------- ---------- -- BACU019551/1-320 LPCGSGAHSD PGPTREEKNV DHPRP----- --