KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:57 2014 Check: 00 .. Name: ENSTTRP00000008737/1-534 Len: 595 Check: 2726 Weight: 1.00 Name: ENSP00000334564/1-534 Len: 595 Check: 4776 Weight: 1.00 Name: bmy_13820T0/1-552 Len: 595 Check: 6248 Weight: 1.00 Name: BACU009446/1-577 Len: 595 Check: 9696 Weight: 1.00 Name: ENSBTAP00000028832/1-533 Len: 595 Check: 2282 Weight: 1.00 // 1 50 ENSTTRP00000008737/1-534 MTQAEIKLCS LLLQEHFGEI VEKIGVHLIR TGSQPLRVIA HDTGTSLDQX ENSP00000334564/1-534 MTQAEIKLCS LLLQEHFGEI VEKIGVHLIR TGSQPLRVIA HDTGTSLDQV bmy_13820T0/1-552 MTQAEIKLCS LLLQEHFGEI VEKIGVHLIR TGSQPLRVIA HDTGTSLDQV BACU009446/1-577 MTQAEIKLCS LLLQEHFGEI VEKIGVHLIR TGSQPLRVIA HDTGTSLDQV ENSBTAP00000028832/1-533 MTQAEIKLCS LLLQEHFGEI VEKIGVHLIR TGSQPLRVIA HDTGTSLDQV 51 100 ENSTTRP00000008737/1-534 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000334564/1-534 KKALCVLVQH NLVSYQVHKR GVVEYEAQCS RVLRMLRYPR YIYTTKTLYS bmy_13820T0/1-552 KKALCVLIQH NLVIYQVHKR GVVEYEAQCS RVLRMLRYPR YIYTAKTLYS BACU009446/1-577 KKALCVLIQH NLVIYQVHKR GVVEYEAQCS RVLRMLRYPR YIYTAKTLYS ENSBTAP00000028832/1-533 KKALCVLIQH NLVIYQVHKR GVVEYEAQCN RVLRMLRYPR YIYTAKTLYS 101 150 ENSTTRP00000008737/1-534 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000334564/1-534 DTGELIVEEL LLNGKLTMSA VVKKVADRLT ETMEDGKTMD YAEVSNTFVR bmy_13820T0/1-552 DTGELIVEEL LLNGKMAMSA VVKKVADRLT ETMEDGKTMD YAEVSNTFVR BACU009446/1-577 DTGELIVEEL LLNGKMAMSA VVKKVADRLT ETMEDGKTMD YAEVSNTFVR ENSBTAP00000028832/1-533 DTGELIVEEL LLNGKMTMSA VVKKVADRLT ETMEDGKTMD YAEVSNTFVR 151 200 ENSTTRP00000008737/1-534 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXKGK ENSP00000334564/1-534 LADTHFVQRC PSVPTTENSD PGPPPPAPTL VINEKDMYLV PKLSLIGKGK bmy_13820T0/1-552 LADTHFVQRC PLVPATENSD PGPPPPAPTL VINEKDMYLV PKLSLIGKGK BACU009446/1-577 LADTHFVQRC PLVPATENSD PGPPPPAPTL VINEKDMYLV PKLSLIGKGK ENSBTAP00000028832/1-533 LVDTHFVQRC PLVPATENSD TGPPPPAPTL VVSEKDMYLV PKLSLIGKGK 201 250 ENSTTRP00000008737/1-534 RRRSSDEDAT GEPKAKRPKH TTDNKEPIPD DGIYWQANLD RFHQHFRDQG ENSP00000334564/1-534 RRRSSDEDAA GEPKAKRPKY TTDNKEPIPD DGIYWQANLD RFHQHFRDQA bmy_13820T0/1-552 RRRSSDEDAT GEPKAKRPKH TTDNKEPIPD DGIYWQANLD RFHQHFRDQG BACU009446/1-577 RRRSSDEDAT GEPKAKRPKH TTDNKEPIPD DGIYWQANLD RFHQHFRDQG ENSBTAP00000028832/1-533 RRRSSDEDAT GEPKAKRPKQ TTDNKEPIPD DGIYWQANLD RFHQHFRDQA 251 300 ENSTTRP00000008737/1-534 IVSAVANRMD ---------- ---------- ---------- ---------- ENSP00000334564/1-534 IVSAVANRMD ---------- ---------- ---------- ---------- bmy_13820T0/1-552 IVSAVANRMD ---------- ---------- ---------- ---------- BACU009446/1-577 IVSAVANRMD QVISKWVGQW LSGIFTYLQM WPLAYSQSQH SRVNSEFQFT ENSBTAP00000028832/1-533 IVSAVANRMD ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000008737/1-534 ---QTSSEIV RTMLRMSEIT TSSSAPFTQP LSSNEIFRSL PVGYNISKQV ENSP00000334564/1-534 ---QTSSEIV RTMLRMSEIT TSSSAPFTQP LSSNEIFRSL PVGYNISKQV bmy_13820T0/1-552 ---QTSSEIV RTMLRMSEIT TSSSAPFTQP LSSNEIFRSL PVGYNISKQV BACU009446/1-577 FQTQTSSEIV RTMLRMSEIT TSSSAPFTQP LSSNEIFRSL PVGYNISKQV ENSBTAP00000028832/1-533 ---QTSSEIV RTMLRMSEVT TPSGAPFTQP LSSNEIFRSL PVGYNISKQV 351 400 ENSTTRP00000008737/1-534 LDQYLTLLAD DPXXXXXXXX XXXXXXXXXX ---------- --------LH ENSP00000334564/1-534 LDQYLTLLAD DPLEFVGKSG DSGGGMYVIN ---------- --------LH bmy_13820T0/1-552 LDQYLTLLAD DPLEFVGKSG DSGGGMYVIN HNDQAKTLRS NLNPLHKDLH BACU009446/1-577 LDQYLTLLAD DPLEFVGKSG DSGGGMYVIN ---------- --------LH ENSBTAP00000028832/1-533 LDQYLTLLAD DPLEFVGKSG DSGGGMYVIN ---------- --------LH 401 450 ENSTTRP00000008737/1-534 KALGSLATAT LESVIQERFG SRCARIFRLV LQKKHLEQKQ VEDFAMIPAK ENSP00000334564/1-534 KALASLATAT LESVVQERFG SRCARIFRLV LQKKHIEQKQ VEDFAMIPAK bmy_13820T0/1-552 KALGSLATAT LESVVQERFG SRCARIFRLV LQKKHLEQKQ VEDFAMIPAK BACU009446/1-577 KALGSLATAT LESVVQERFG SRCARIFRLV LQKKHLEQKQ VEDFAMIPAK ENSBTAP00000028832/1-533 KALGSLATAT LESVVQERFG SRCARIFRLV LQKKHLEQKQ VEDFAMIPAK 451 500 ENSTTRP00000008737/1-534 EAKDMLYKML SENFISLQEI PKTPDHAPSR TFYLYTVNIL SAARMLLHRC ENSP00000334564/1-534 EAKDMLYKML SENFMSLQEI PKTPDHAPSR TFYLYTVNIL SAARMLLHRC bmy_13820T0/1-552 EAKDMLYKML SENFISLQEI PKTPDHAPSR TFYLYTVNIL SAARMLLHRC BACU009446/1-577 EAKDMLYKML SENFISLQEI PKTPDHAPSR TFYLYTVNIL SAARMLLHRC ENSBTAP00000028832/1-533 EAKDMLYKML SENFISLQEI PKTPDHAPSR TFYLYTVNIL SAARMLLHRC 501 550 ENSTTRP00000008737/1-534 YKXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000334564/1-534 YKSIANLIER RQFETKENKR LLEKSQRVEA IIASMQATGA EEAQLQEIEE bmy_13820T0/1-552 YKSVANLIER RQFETKENKR LLEKSQRVEA IIASMQATGA EEAQLQEIEE BACU009446/1-577 YKSVANLIER RQFETKENKR LLEKSQRVEA IIASMQATGA EEAQLQEIEE ENSBTAP00000028832/1-533 YKSVANLIER RQFETKENKR LLEKSQRVEA IIASMQATGA EEAQLQEIEE 551 600 ENSTTRP00000008737/1-534 XXXXXXXXXX XXXXXXXXXL DACEIQVDET IFLLESYIES TVKRQ ENSP00000334564/1-534 MITAPERQQL ETLKRNVNKL DASEIQVDET IFLLESYIEC TMKRQ bmy_13820T0/1-552 MITAPERQQL ETLKRNVNKL DACEIQVDET IFLLESYIES TMKRQ BACU009446/1-577 MITAPERQQL ETLKRNVNKL DACEIQVDET IFLLESYIES TMKRQ ENSBTAP00000028832/1-533 MITAPERQQL ETLKRNVNKL DACEIQVDET IFLLESYIES TMKR-