KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:58 2014 Check: 00 .. Name: ENSP00000268379/1-453 Len: 453 Check: 927 Weight: 1.00 Name: ENSBTAP00000028853/1-453 Len: 453 Check: 9802 Weight: 1.00 Name: ENSTTRP00000006977/1-453 Len: 453 Check: 3154 Weight: 1.00 Name: bmy_18867T0/1-412 Len: 453 Check: 4342 Weight: 1.00 Name: BACU013840/1-453 Len: 453 Check: 9884 Weight: 1.00 // 1 50 ENSP00000268379/1-453 MKLLTRAGSF SRFYSLKVAP KVKATAAPAG APPQPQDLEF TKLPNGLVIA ENSBTAP00000028853/1-453 MKLLTRAGSL SRFYSLKVAP KVKATEAPAG VPPHPQDLEF TRLPNGLVIA ENSTTRP00000006977/1-453 MRLIARAGSL SRFYSLKVAP KAKATTAPAG VPPHPQDLEF TKLPNGLVIA bmy_18867T0/1-412 MKLIARAGTL SRFYSLKVAP KAKATTAPAG APPHPQDLEF TKLPNGLVIA BACU013840/1-453 MKLIARAGSL SRFYSLKVAP KAKATAAPAG APPHPQDLEF TKLPNGLVIA 51 100 ENSP00000268379/1-453 SLENYSPVSR IGLFIKAGSR YEDFSNLGTT HLLRLTSSLT TKGASSFKIT ENSBTAP00000028853/1-453 SLENYAPASR IGLFIKAGSR YENSNNLGTS HLLRLASSLT TKGASSFKIT ENSTTRP00000006977/1-453 SLENYAPASR IGLFIKAGSR YEDSNNLGTS HLLRLASSLT TKGASSFKIT bmy_18867T0/1-412 SLENYAPASR IGLFIKAGSR YEDSNNLGTS HLLRLASSLT TKGASSFKIT BACU013840/1-453 SLENYAPASR IGLFIKAGSR YEDSNNLGTS HLLRLASSLT TKGASSFKIT 101 150 ENSP00000268379/1-453 RGIEAVGGKL SVTATRENMA YTVECLRGDV DILMEFLLNV TTAPEFRRWE ENSBTAP00000028853/1-453 RGIEAVGGKL SVTSTRENMA YTVECLRDDV DILMEFLLNV TTAPEFRRWE ENSTTRP00000006977/1-453 RGIEAVGGEL SVISTRENMA YTVECLRDDV DILMEFLLNV TTAPEFHRWE bmy_18867T0/1-412 RGIEAVGGKL SVISTRENMA YTVECLRDDV DILMEFLLNV TTAPEFRRWE BACU013840/1-453 RGIEAVGGKL SVISTRENMA YTVECLRDDV DILMEFLLNV TTAPEFRRWE 151 200 ENSP00000268379/1-453 VADLQPQLKI DKAVAFQNPQ THVIENLHAA AYRNALANPL YCPDYRIGKV ENSBTAP00000028853/1-453 VAALQPQLRI DKAVALQNPQ AHVIENLHAA AYRNALANSL YCPDYRIGKV ENSTTRP00000006977/1-453 VAALQSQLRI DKAVAFQNPQ AHVIENLHAA AYRNALANSL YCPXXXXXXX bmy_18867T0/1-412 VAALQPQLRI DKAVALQNPQ AHVIENLHAA AYR------- ---------- BACU013840/1-453 VAAVQPQLRI DKAVAFQNPQ THVIENLHAA AYRNALANSL YCPDYRIGKV 201 250 ENSP00000268379/1-453 TSEELHYFVQ NHFTSARMAL IGLGVSHPVL KQVAEQFLNM RGGLGLSGAK ENSBTAP00000028853/1-453 TPVELHDYVQ NHFTSARMAL IGLGVSHPVL KQVAEQFLNI RGGLGLSGAK ENSTTRP00000006977/1-453 XXXXLHDYVQ NHFTSARMAL IGLGVSHPVL KQVAEQFLNM RGGLGLSGAK bmy_18867T0/1-412 ---------- ---------- ----VSHPVL KQVAEQFLNM RGGLGLSGAK BACU013840/1-453 TPDELHDYVQ NHFTSARMAL IGLGVSHPVL KQVAEQFLNM RGGLGLSGAK 251 300 ENSP00000268379/1-453 ANYRGGEIRE QNGDSLVHAA FVAESAVAGS AEANAFSVLQ HVLGAGPHVK ENSBTAP00000028853/1-453 AKYHGGEIRE QNGDSLVHAA LVAESAAIGS AEANAFSVLQ HVLGAGPHVK ENSTTRP00000006977/1-453 TKYRGGEIRE QNGDSLVHAA LVAESAAAGS AEANAFSVLQ HVLGAGPHVK bmy_18867T0/1-412 TKYRGGEIRE QNGDSLVHAA LVAESAAAGS AEANAFSVLQ HVLGAGPHVK BACU013840/1-453 TKYRGGEIRE QNGDGLVHAA LVAESAAAGS AEANAFSVLQ HVLGAGPHIK 301 350 ENSP00000268379/1-453 RGSNTTSHLH QAVAKATQQP FDVSAFNASY SDSGLFGIYT ISQATAAGDV ENSBTAP00000028853/1-453 RGSNATSSLY QAVAKGVHQP FDVSAFNASY SDSGLFGFYT ISQAASAGDV ENSTTRP00000006977/1-453 RGSNATSSLY QAVAKGIHQP FDVSAFNASY SDSGLFGIYT ISQAAAAGDV bmy_18867T0/1-412 RGSNATSSLC QAVAKGIHQP FDVSAFNASY SDSGLFGIYT ISQAAAAGDV BACU013840/1-453 RGSNATSSLY QAVAKGIHQP FDVSAFNASY SDSGLFGIYT ISQAVAAGDV 351 400 ENSP00000268379/1-453 IKAAYNQVKT IAQGNLSNTD VQAAKNKLKA GYLMSVESSE CFLEEVGSQA ENSBTAP00000028853/1-453 IKAAYNQVKT IAQGNLSNPD VQAAKNKLKA GYLMSVESSE GFLDEVGSQA ENSTTRP00000006977/1-453 IKAAYNQVKT VARGNLSNTD VQVAKNKLKA GYLMSVESSE SFLDEVGSQA bmy_18867T0/1-412 IKAAYNQVKT VAQGNLSNTD VQVAKNKLKA GYLMSVESSE GFLDEVGSQA BACU013840/1-453 IKAAYNQVKT VAQGNLSNTD VQVAKNKLKA GYLMSVESSE GFLDEVGSQA 401 450 ENSP00000268379/1-453 LVAGSYMPPS TVLQQIDSVA NADIINAAKK FVSGQKSMAA SGNLGHTPFV ENSBTAP00000028853/1-453 LAAGSYTPPS TVLQQIDAVA DADVINAAKK FVSGRKSMAA SGNLGHTPFI ENSTTRP00000006977/1-453 LVAGSYVPPS TVLEQIDSVA DADVINAAKK FVSGQKSMAA SGNLGHTPFV bmy_18867T0/1-412 LVAGSYVPPS TVLQQIDSVA DADVINAAKK FVSGRKSMAA SGNLGHTPFV BACU013840/1-453 LVAGSYVPPS TVLQQIDSVA DADVVNAAKK FVSGRKSMAA SGNLGHTPFV 451 500 ENSP00000268379/1-453 DEL ENSBTAP00000028853/1-453 DEL ENSTTRP00000006977/1-453 DEL bmy_18867T0/1-412 DEL BACU013840/1-453 DEL