KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:59 2014 Check: 00 .. Name: ENSP00000441685/1-204 Len: 265 Check: 5129 Weight: 1.00 Name: ENSBTAP00000028854/1-263 Len: 265 Check: 8967 Weight: 1.00 Name: ENSTTRP00000006976/1-194 Len: 265 Check: 7688 Weight: 1.00 Name: bmy_18866T0/1-265 Len: 265 Check: 4308 Weight: 1.00 Name: BACU013839/1-265 Len: 265 Check: 5079 Weight: 1.00 // 1 50 ENSP00000441685/1-204 MQKASHKNKK ---------- ---------- ---------- ---------- ENSBTAP00000028854/1-263 MKKSVQKNVK GKQVNLKVKP SVHDLSKTQQ TKLTVGSMGL GLIIIQHGPY ENSTTRP00000006976/1-194 ---------- ---------- ---------- ---------- ---------- bmy_18866T0/1-265 MKKAVHKSVK ERQIGLKVKP SVHNLSKTQQ TKLTVGSLGL GLIIIQHGPY BACU013839/1-265 MKKAVHKSVK ERQIGLKVKP SVHNLSKTQQ TKLTVGSLGL GLVIIQHGPY 51 100 ENSP00000441685/1-204 ---------- ---------- GDVLISVGHA NVLGYTLREF LQLLQHITIG ENSBTAP00000028854/1-263 LQISHLITKG AAARDGTLQP GDVLISVGYA NVLGYTLREF LKLLQHITIG ENSTTRP00000006976/1-194 ---------- ---------- -DVLITVGYA NVLGYTLREF LKLLQHITIG bmy_18866T0/1-265 LQITHLIKKG SAARDGKLQP GDILISVGYA NVLGYTLREF LKLLQHITIG BACU013839/1-265 LQITHLIKKG SAARDGKLQP GDVLISVGYA NVLGYTLREF LKLLQHITIG 101 150 ENSP00000441685/1-204 TVLQIKVYRD FINIPEEWQE IYDLIPEAKF PVTSTPKKIE LAKDESFTSS ENSBTAP00000028854/1-263 TILQIKVYRD FIDIPQEWQE IYDLIPETKF PITRTTKKTE EAKDGSVTSS ENSTTRP00000006976/1-194 TVLQIKVYRD FIDIPQEWQE IYDLIPETKF PITHTTKKTE EAKDDSFTSS bmy_18866T0/1-265 TVLQIKVYRD FIDIPQEWQE IYDLIPETKF PIIRTTKKTE EAKDDSFTSS BACU013839/1-265 TVLQIKVYRD FIDIPQEWQE IYDLIPETKF PITRTTKKTE EAKDDSFTSS 151 200 ENSP00000441685/1-204 DDNENVDLDK RLQYYRYPWS TVHHPARRPI SISRDWHGYK KKNHTISVGK ENSBTAP00000028854/1-263 DDDE--AFDT RLKYYKYPRS TGHYPVRRPM SISREWHGYK KKNHVMRVGK ENSTTRP00000006976/1-194 DDNEDAVLDK RLKYYKYPRS TGHYPARRPM SISREWHGYK KKNCTFSVGK bmy_18866T0/1-265 DDDEDAVLDK RLKYYKYPRS TGHYPARRPM SISTEWHGYK KKNCTISVGK BACU013839/1-265 DDDEDAVLDK RLKYYKYPQS TGHYPARRPM SISTEWHGYK KKNCTISVGK 201 250 ENSP00000441685/1-204 DINCDVMIHR DDKKEVRAPS PYWIMVKQDN E-SSSSSTSS TSDAFWLEDC ENSBTAP00000028854/1-263 DINCDVMIHR DHKKEVRAPS PYWTMVKQDN EISSSSSASS TSDAFWLEDC ENSTTRP00000006976/1-194 DSNCDVMIHR DHKKEVRAPS PYWTMVKQDD ESSSSSSASS TSDAFWLEDY bmy_18866T0/1-265 DINCDVMIHR DHKKEVRAPS PYWTMVKQDN ESSSSSSASS TSDAFWLEDY BACU013839/1-265 DINCDVMIHR DHKKEVRAPS PYWTMVKQDN ESSSSSSASS TSDAFWLEDY 251 300 ENSP00000441685/1-204 AQVEEGKAQL VSKVG ENSBTAP00000028854/1-263 TPVEKGSSEP VSRVG ENSTTRP00000006976/1-194 AHADKGKSEP VSKVG bmy_18866T0/1-265 AHVEKGKSEP VSKVG BACU013839/1-265 AHVEKGKNEP VSKVG