KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:36:59 2014 Check: 00 .. Name: ENSTTRP00000012285/1-254 Len: 261 Check: 8500 Weight: 1.00 Name: bmy_21388T0/1-236 Len: 261 Check: 2803 Weight: 1.00 Name: BACU009078/1-261 Len: 261 Check: 1622 Weight: 1.00 Name: ENSP00000252729/1-260 Len: 261 Check: 1846 Weight: 1.00 Name: ENSBTAP00000028860/1-260 Len: 261 Check: 1330 Weight: 1.00 // 1 50 ENSTTRP00000012285/1-254 -MMWSNFFMH EEDR------ RRRAHGARKA RMTPEHEGKI KLALLLTSVG bmy_21388T0/1-236 MMMWSNFFMH EEDRRLGAVG RRRAHGARKA RMTPEHEGKI KLALLLTSVG BACU009078/1-261 MMMWPNFFMH EEDRRLGAVG RRRAHGARKA SMTPEHEGKI KLALLLTSVG ENSP00000252729/1-260 -MMWSNFFLQ EENRRRGAAG RRRAHGQGRS GLTPEREGKV KLALLLAAVG ENSBTAP00000028860/1-260 -MMWSNFFLQ EENRRRGAAA RRRARGQPKA QMTPEREGKI KLALLLTSVG 51 100 ENSTTRP00000012285/1-254 ATLAVLAVGT EFWVELNTYR DNGSAVCDAA HLGLWKMCTK RLWQADVPAG bmy_21388T0/1-236 ATLAVLAVGT EFWVELNTYR DNGSAVCDAA HLGLWKMCTK RLWQADVPAG BACU009078/1-261 ATLAVLAVGT EFWVELNTYR DNGSAVCDAA HLGLWKMCTK RLWQADVPAS ENSP00000252729/1-260 ATLAVLSVGT EFWVELNTYK ANGSAVCEAA HLGLWKACTK RLWQADVPVD ENSBTAP00000028860/1-260 ATLAVLAVGT EFWVELNTYR DNGSAVCDAA HLGLWKMCTK RLWQADVPAG 101 150 ENSTTRP00000012285/1-254 RDTCGPAELP GEANCTYFKF FTTGEDAHIF QRTTKKEVNM APAVIAVLGM bmy_21388T0/1-236 RDTCGPAALP G--------- ---------- ------EVNL AAAVIAVLGL BACU009078/1-261 RDTCGPAELP GEANCTYFKF FTTGEDAHIF QRTTKKEVNL AAAVIAVLGL ENSP00000252729/1-260 RDTCGPAELP GEANCTYFKF FTTGENARIF QRTTKKEVNL AAAVIAVLGL ENSBTAP00000028860/1-260 RDTCGPAELP GEANCTYFKF FTTGENAHIF QRTTKKEVNQ AAAVIAVLGL 151 200 ENSTTRP00000012285/1-254 AVMALGCLCV IMVLNKGAEF LLRVAAICFX XXXLLLLVSL EVFRHSVQAL bmy_21388T0/1-236 AVMALGCLCI ITVLSKGAEF LLRVGAICFG LSGLLLLVSL EVFRHSVQAL BACU009078/1-261 AVMALGCLCI IMVLSKGAEF LLRVGAICFG LSGLLLLVSL EVFRHSVQAL ENSP00000252729/1-260 AVMALGCLCI IMVLSKGAEF LLRVGAVCFG LSGLLLLVSL EVFRHSVRAL ENSBTAP00000028860/1-260 AVMALGCLCI IMVLSKGAEF LLRVGAVCFG LSGLLVLVSL EVFRHSVRAL 201 250 ENSTTRP00000012285/1-254 LQRVSPEPPP SPALTYEYSW SLGCGVGAGL VLILGSGFFF LLTLPPWPWG bmy_21388T0/1-236 LQRVSPDPPP SPALTYEYSW SLGCGLGAGL VLILGSGFFL LLTLPPWPWG BACU009078/1-261 LQRVSPEPPP SPALTYEYSW SLSCGLGAGL VLILGSGFFL LLTLPPWPWG ENSP00000252729/1-260 LQRVSPEPPP APRLTYEYSW SLGCGVGAGL ILLLGAGCFL LLTLPSWPWG ENSBTAP00000028860/1-260 MQRVSPEPPV APALTYEYSW SLGCGVGAGL ILMLGGGCFL LLALPPGPWS 251 300 ENSTTRP00000012285/1-254 SICPKWGHRA T bmy_21388T0/1-236 SLCPKWGHRA T BACU009078/1-261 SLCPKWGHRA T ENSP00000252729/1-260 SLCPKRGHRA T ENSBTAP00000028860/1-260 PLCPKWGQRA P