KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:36:59 2014 Check: 00 .. Name: ENSP00000293662/1-395 Len: 397 Check: 2128 Weight: 1.00 Name: ENSBTAP00000028862/1-394 Len: 397 Check: 7393 Weight: 1.00 Name: ENSTTRP00000002639/1-291 Len: 397 Check: 9926 Weight: 1.00 Name: bmy_19455T0/1-229 Len: 397 Check: 3747 Weight: 1.00 // 1 50 ENSP00000293662/1-395 MTLRRLRKLQ QKEEAAATPD PAARTPDSEV APAAPVPTP- -GPPAAAATP ENSBTAP00000028862/1-394 MTLRRLRKLQ QKEEAAAAPD PSARAPDSEA APAAPTPTPA SGPPAAAAGP ENSTTRP00000002639/1-291 MTLRRLRKLQ QKEEAAATPD PAAPAPDSEA APAPPTPTPA SGPPAAAACP bmy_19455T0/1-229 MTLRRLRKLQ QKEEAAAAPD PAAPAPDSEA APAPPTPAS- -GPPAAAASP 51 100 ENSP00000293662/1-395 GPPADELYAA LEDYHPAELY RALAVSGGTL PRRKGSGFRW KNLSQSPEQQ ENSBTAP00000028862/1-394 GTPGDELYAA LEDYHPAELY RALAVSGGTL PRRKGSGFRW KNLSQSPEQQ ENSTTRP00000002639/1-291 GTPGDELYAA LEDYHPAELY RALAVSGGTL PRRKGSGLRW KNLSQSPEQQ bmy_19455T0/1-229 GTPGDELYAA LEDYHPAELY RALAVSGGTL PRRKGSGLRW KNLSQSPEQQ 101 150 ENSP00000293662/1-395 RKVLTLEKED NQTFGFEIQT YGLHHREEQR VEMVTFVCRV HESSPAQLAG ENSBTAP00000028862/1-394 RKVLTLEKEE NQTFGFEIQT YGLHHREEQR VEMVTFVCRV HESSPAQLAG ENSTTRP00000002639/1-291 RKVLTLEKEE NQTFGFEIQT YGLHHREEQR VEMVTFVCRV HESSPAQLAG bmy_19455T0/1-229 RKVLTLEKEE NQTFGFEIQT YGLHHREEQR VEMVTFVCRV HESSPAQLAG 151 200 ENSP00000293662/1-395 LTPGDTIASV NGLNVEGIRH REIVDIIKAS GNVLRLETLY GTSIRKAELE ENSBTAP00000028862/1-394 LTPGDTIASV NGLNVEGIRH REIVDIIKAS GNVLRLETLY GTSIRKAELE ENSTTRP00000002639/1-291 LTP-DTIASV NGLNVEGIRH REIVDIIKAS GNILRLETLY GTSIRKAELE bmy_19455T0/1-229 LTPGDTIASV NGLNVEGIRH REIVDIIKAS GNVLRLETLY GTSIRKAELE 201 250 ENSP00000293662/1-395 ARLQYLKQTL YEKWGEYRSL MVQEQRLVHG LVVKDPSIYD TLESVRSCLY ENSBTAP00000028862/1-394 ARLQYLKQTL YEKWGEYRSL MVQEQRLVHG LVVKDPSIYD TLESVRSCLY ENSTTRP00000002639/1-291 ARLQYLKQTL YEKWGEYRSL MVQEQRLVHG LVVKDPSIYD TLESVRSSLY bmy_19455T0/1-229 ARLQYLKQTL YEKWGEYRSL MVQEQRLVHG E--------- ---------- 251 300 ENSP00000293662/1-395 GAGLLPGSLP FGPLLAVPGR PRGGARRARG DADDAVYHTC FFGDSEPPAL ENSBTAP00000028862/1-394 GAGLLPGSLP FGPLLAAPGG SRGGARRTGG DSDDAVYHTC FFGGAEPPAP ENSTTRP00000002639/1-291 GAGLLPGSLP FGLLLAAHGG PRDGARR-GG DADDYIYQSC FFG------- bmy_19455T0/1-229 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000293662/1-395 PPPPPPARAF GPGPAETPAV GPGPGPRAAL SRSASVRCAG PGGGGGGGAP ENSBTAP00000028862/1-394 PPPPPPPLAR LPGPGAADA- -SAPGSRAML SRSASVRCAG P-GGGGGGAP ENSTTRP00000002639/1-291 ---------- ---------- ---------- ---------- ---------- bmy_19455T0/1-229 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000293662/1-395 GALWTEAREQ ALCGPGLRKT KYRSFRRRLL KFIPGLNRSL EEEESQL ENSBTAP00000028862/1-394 SALWTEAREQ ALCGPGLRKT KYRSFRRRLL KFIPGLNRSL EEEESQL ENSTTRP00000002639/1-291 ---------- ---------- ---------- ---------- ------- bmy_19455T0/1-229 ---------- ---------- ---------- ---------- -------