KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:00 2014 Check: 00 .. Name: bmy_04788T0/1-259 Len: 379 Check: 8015 Weight: 1.00 Name: ENSBTAP00000028864/1-349 Len: 379 Check: 6482 Weight: 1.00 Name: ENSTTRP00000004468/1-376 Len: 379 Check: 9619 Weight: 1.00 Name: ENSP00000299157/1-377 Len: 379 Check: 1659 Weight: 1.00 Name: BACU000943/1-376 Len: 379 Check: 1763 Weight: 1.00 // 1 50 bmy_04788T0/1-259 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028864/1-349 MSEVKSRKKS GTKGAP-AEP GKRNEGGKSP EARGGGGRGW ADPRTGVSLL ENSTTRP00000004468/1-376 MSEGKSRKRS APKGAP-AEP GKRSEDGKSL EGRGGGGGGW ADPRTGLSLL ENSP00000299157/1-377 MSEVKSRKKS GPKGAPAAEP GKRSEGGKTP VARSSGGGGW ADPRTCLSLL BACU000943/1-376 MSEVKSRKRS APKGAP-AEP GKRSEGGKSP EARGGGGRGW ADPRTGVSLL 51 100 bmy_04788T0/1-259 ---------- ---------- ---MRYDVII ---------- --------TC ENSBTAP00000028864/1-349 SLGTCLGLAW FVFQQSEKFA KVENQYQLLK METSEFQGLQ SKISLISEKC ENSTTRP00000004468/1-376 SLGTCLGLAW FIFQQSEKFA KVENQYQLLK METNEFQGLQ SKISLISEKL ENSP00000299157/1-377 SLGTCLGLAW FVFQQSEKFA KVENQYQLLK LETNEFQQLQ SKISLISEKL BACU000943/1-376 SLGTCLGLAW FVFQQSEKFA KVENQYQLLK METNEFQGLQ SKISLISEKL 101 150 bmy_04788T0/1-259 QKSEAIIEHL KSFQIITHLK RLQEEIYEVK TWSNRITEKQ DILNNNLTTV ENSBTAP00000028864/1-349 QKSEAIIEQL KAFQIITHLK HLQEEIYEVK TWSSRISEKQ DILNNNLTTV ENSTTRP00000004468/1-376 AATESILQEA TSS--MSLVT QFEQEVSSLQ SIMHDIQNSE EMLTQKMQSL ENSP00000299157/1-377 ESTESILQEA TSS--MSLMT QFEQEVSNLQ DIMHDIQNNE EVLTQRMQSL BACU000943/1-376 ATTESILQEA TSS--MSLVT QFEQEVSSLQ SIMHDIQNSE EMLTQKMQSL 151 200 bmy_04788T0/1-259 SEDVTKVDQS TTSMAKDVGL KITTVKTDIR RISGLVT-DV TSLTDSVQEL ENSBTAP00000028864/1-349 SQDVAKADQS TTSMAKDIGL KITTIKTDIR RMSGLVT-DV TSLTDSVQEL ENSTTRP00000004468/1-376 NEKFQNVTDF WKRSLEEMNV NTDIFKSESK HIHSQVTVQI NSAEQEIKLL ENSP00000299157/1-377 NEKFQNITDF WKRSLEEMNI NTDIFKSEAK HIHSQVTVQI NSAEQEIKLL BACU000943/1-376 NEKFQNVTDF WKRSLEEMNV NTDIFKSESK HIHSQVTVQI NSAEQEIKLL 201 250 bmy_04788T0/1-259 ENKIEEVEKN TVKNI----- ---------G DLLSSSIDRT AMLRKTASDN ENSBTAP00000028864/1-349 ENKIEKVEKN TVKNI----- ---------G DLLSSSIDRT AMLRKTASEN ENSTTRP00000004468/1-376 TERLKDLEDS TLRNIRTIKR QEEEDLLRVE EQLGSDTEAL EKLEEEXXXX ENSP00000299157/1-377 TERLKDLEDS TLRNIRTVKR QEEEDLLRVE EQLGSDTKAI EKLEEEQHAL BACU000943/1-376 TERLKDLEDS TLRNIRTIKR QEQEDLLRVE EQLGSDTKAL EKLEEGQHAL 251 300 bmy_04788T0/1-259 SQRINSVKKI LSELQSDFSK HTDRFLSLES DRAKVLK--- ----TVTFAN ENSBTAP00000028864/1-349 SQRINSVKKI LSELQGDFNK HTDRLLSLES DRAKVLK--- ----TVTFAN ENSTTRP00000004468/1-376 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000299157/1-377 FARDEDLTNK LSDYEPKVEE CKTHLPTIES AIHSVLRVSQ DLIETEKKME BACU000943/1-376 FARDEDLTNK LSSYEPKAEE CKTHLPTIES AIRSVLRVSQ DLIGTEKKME 301 350 bmy_04788T0/1-259 DLKPKVYNLK KDFSRLEPLV NDLTVRIGRL VTD--LLQRE KEIAFLKEKI ENSBTAP00000028864/1-349 DLKPKVYNLK KDFSRLEPLV NDLTLRIGRL VTD--LQQRE KEIAFLKEKI ENSTTRP00000004468/1-376 XXXXXXXXME DDMLKAVSEI MEMQKTLEGI QYDNSILKMQ NELDVLKGKV ENSP00000299157/1-377 DLTMQMFNME DDMLKAVSEI MEMQKTLEGI QYDNSILKMQ NELDILKEKV BACU000943/1-376 DLTLQMFNME DDMLKAVSEI MEMQKTLEGI QYDNSILKMQ NELDVLKGKV 351 400 bmy_04788T0/1-259 SNL-----TI VRAEIKDMKD EIKHISDMD ENSBTAP00000028864/1-349 SNL-----TT VRAEIKDMKD EIKHISDMD ENSTTRP00000004468/1-376 HDFIVYSSTR EKGTPEEYNL ENKGIDSDF ENSP00000299157/1-377 HDFIAYSSTG EKGTLKEYNI ENKGIGGDF BACU000943/1-376 HDFIVYSSTR EKGTPEEYNL ENKGIDSDF