KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:08 2014 Check: 00 .. Name: ENSP00000458290/1-472 Len: 473 Check: 4564 Weight: 1.00 Name: ENSBTAP00000028874/1-470 Len: 473 Check: 7811 Weight: 1.00 Name: BACU014682/1-395 Len: 473 Check: 2711 Weight: 1.00 Name: ENSTTRP00000007812/1-468 Len: 473 Check: 7972 Weight: 1.00 Name: bmy_22088T0/1-470 Len: 473 Check: 6776 Weight: 1.00 // 1 50 ENSP00000458290/1-472 MSVVHQLSAG WLLDHLSFIN KINYQLHQHH EPCCRKKEFT TSVHFESLQM ENSBTAP00000028874/1-470 MSVVHELSPG WLLDHLAFIN KISYELHQHH EPCCSKSRPT -SVHLDSLHM BACU014682/1-395 ---------- ---------- ---------- ---------- ---------M ENSTTRP00000007812/1-468 MSVVRELSPG WLLDHLSFIN KISYELHQHH EPCCSKNEPT SSVHLDTLHV bmy_22088T0/1-470 MSVVRELSPG WLLDHLSFIN KISYELHQHH EPCCSKNEPT SSVHFDTLHM 51 100 ENSP00000458290/1-472 DSVSSSGVCA AFIASDSSTK PENDDGGNYE MFTRKFVFRP ELFDVTKPYI ENSBTAP00000028874/1-470 DSVSSFGASA TFVP--STSK PENDDRGNCE MFIQKYVFRS ELFDISKPYI BACU014682/1-395 DSVSSFGASA TCIA--STTK PENDDGGNCE MFIQKYVFRS ELFDVTKPYI ENSTTRP00000007812/1-468 DSVSSFGASA TCIA--STTK PENDDGGNCE MFIQKYVFRS ELFDVTKPYI bmy_22088T0/1-470 DSMSSFEASA TCIA--STTK PENDDGGNCE MFIQKYVFRS ELFDVTKPYI 101 150 ENSP00000458290/1-472 TPAVHKECQQ SNEKEDLMNG VKKEISISII GKKRKRCVVF NQGELDAMEY ENSBTAP00000028874/1-470 TSANHKECQE SKEKEDLVND VKKEIFISIN GKKRKRCVAF NQGELDAMEY BACU014682/1-395 TSAIHKECQQ SNEKEDLVND VKKEISISVN GKKRKRCVDF NQGELDAMEY ENSTTRP00000007812/1-468 TSAIHKECQQ SNEKEDLVND VKKEISISVN GKKRKRCVVF NQGELDAMEY bmy_22088T0/1-470 TSAIHKECQQ SNEKEDLVND VKKEISISVN GKKRKRCVDF NQGELDAMEY 151 200 ENSP00000458290/1-472 HTKIRELILD GSLQLIQEGL KSGFLYPLFE KQDKGSKPIT LPLDACSLSE ENSBTAP00000028874/1-470 HRKIRGLILD GSSQLIQEGL TSGFLHSCSE KLNKCSEPIT LPLDTCNLSE BACU014682/1-395 HTKIRGLILD GSSQLIQEGL KSGFLHPLYE KRDKYSEPII LPLDTCNLSE ENSTTRP00000007812/1-468 HTKIRGLILD GSSQLIQEGL KSGFLHPLYE KRDKYTEPIT LPLDTCNLSE bmy_22088T0/1-470 HTKIRGLILD GSSQLIQEGL KSGFLHPLYE KRDKYSEPIT LPLDTCNLSE 201 250 ENSP00000458290/1-472 LCEMAKHLPS LNEMEHQTLQ LVEEDTSVTE QDLFLRVVEN NSSFTKVITL ENSBTAP00000028874/1-470 LCEMAKHLPF LNETELQTLQ LMEDDTSVTE QDLFSRIVEN TSSFTKIITL BACU014682/1-395 LCEMAKHLPS LNEMELQTLQ LMEDDISVTE QYLFSRIVDN NSSFTKMITL ENSTTRP00000007812/1-468 LCEMAKHCLS LNEMDLQTL- LMDDDISVTE QDLFSRIVEN NSSFTKMITL bmy_22088T0/1-470 LCEMAKHLPS LNEMELQTLQ LMEDDISVTE QYLFSRIVDN NSSFTKMITL 251 300 ENSP00000458290/1-472 MGQKYLLPPK SSFLLSDISC MQPLLNYRKT FDVIVIDPPW QNKSVKRSNR ENSBTAP00000028874/1-470 MGQKYLLPPK SSFLLSDISC MHPLLNCKKT YDVIVIDPPW QNKSVKRSNR BACU014682/1-395 MGQKYLLPPR SSFLLSDISC IHPLLNCKKT YDVIVIDPPW QNKSVKRSNR ENSTTRP00000007812/1-468 MGQK-VLPPK SSFLLSDISC MYPLLSCKKT YDVIVIDPPW QNKSVKRSNR bmy_22088T0/1-470 MGQKYLLPPK SSFLLSDISC IHLLLNCKKT YDVIVIDPPW QNKSVKRSNR 301 350 ENSP00000458290/1-472 YSYLSPLQIQ QIPIPKLAAP NCLLVTWVTN RQKHLRFIKE ELYPSWSVEV ENSBTAP00000028874/1-470 YSYLSPLQIK QIPVPKLAAP SCLVVTWVTN RQKHLRFVKE ELYPSWSVEV BACU014682/1-395 YSYLSPLQIK QIPIPKLAAP NCLVVTWVTN RQKHLRFVKE ELYPSWSVEI ENSTTRP00000007812/1-468 YSYLSPLQIK QIPIPKLAAP NCLVVTWVTN RQKHLRFVKE ELYPSWSVEI bmy_22088T0/1-470 YSYLSPLQIK QIPIPKLAAP NCLVVTWVTN RQKHLRFVKE ELYPSWSVEV 351 400 ENSP00000458290/1-472 VAEWHWVKIT NSGEFVFPLD SPHKKPYEGL ILGRVQEKTA LPL-RNADVN ENSBTAP00000028874/1-470 VAEWHWVKIT SSGEFVFPLD SPHKKPYEGL ILGRVREKAA LLLSRNADVK BACU014682/1-395 VAEWHWVKIT SSGEFVFPLD SPHKKPYEGL ILGRVREKAA LPL-RNADVK ENSTTRP00000007812/1-468 VAEWHWVKIT SSGEFVFPLD SPHKKPYEGL ILGRVREKAA LPL-RNADVK bmy_22088T0/1-470 VAEWHWVKIT SSGEFVFPLD SPHKKPYEGL ILGRVREKAA LPL-RNADVK 401 450 ENSP00000458290/1-472 VLPIPDHKLI VSVPCTLHSH KPPLAEVLKD YIKPDGEYLE LFARNLQPGW ENSBTAP00000028874/1-470 ELPIPDHKLI VSVPCTLHSH KPPLAEVLKD YIKPEGECLE LFARNLQPGW BACU014682/1-395 ELPIPDHKLI VSVPCTLHSH KPPLAE---- ---------S FIVSNWSVAW ENSTTRP00000007812/1-468 ELPIPDHKLI VSVPCTLHSH KPPLAEVLKD YIKPEGECLE LFARNLQPGW bmy_22088T0/1-470 ELPIPDHKLI VSVPCTLHSH KPPLAEVLKD YIKPEGECLE LFARNLQPGW 451 500 ENSP00000458290/1-472 TSWGNEVLKF QHVDYFIAVE SGS ENSBTAP00000028874/1-470 TSWGNEVLKF QHMDYFVALK SKS BACU014682/1-395 ERAPG----- ----SYIAA- --- ENSTTRP00000007812/1-468 TSWGNEVLKF QHVDYFVALE SKS bmy_22088T0/1-470 TSWGNEVLKF QHVDYFVALE SKS