KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:11 2014 Check: 00 .. Name: ENSP00000354775/1-708 Len: 710 Check: 6521 Weight: 1.00 Name: ENSBTAP00000028884/1-709 Len: 710 Check: 1764 Weight: 1.00 Name: bmy_12775T0/1-656 Len: 710 Check: 4103 Weight: 1.00 Name: BACU014954/1-709 Len: 710 Check: 4713 Weight: 1.00 Name: ENSTTRP00000002743/1-709 Len: 710 Check: 6556 Weight: 1.00 // 1 50 ENSP00000354775/1-708 MSQYTEKEPA AMDQESGKAV WPKPAGGYQT ITGRRYGRRH AYVSFKPCMT ENSBTAP00000028884/1-709 MSQYIEKEPA AMDQDSSKTA WPKPAGGYQT ITGRRYGRRH AYVSFKPCMT bmy_12775T0/1-656 ---------- -MDQETSKAA WPKPAGGYQT ITGRRYGRRH AYVSFKPCMT BACU014954/1-709 MSQYTEKEPA AMDQEASKAA WPKPAGGYQT ITGRRYGRRH AYVSFKPCMT ENSTTRP00000002743/1-709 MSQYTEKEPA AMDQESSKAA WPKPAGGYQT ITGRRYGRRH AYVSFKPCMT 51 100 ENSP00000354775/1-708 RHERSLGRAG DDYEVLELDD VPKENSSGSS PLDQVDSSLP SEPIFEKSET ENSBTAP00000028884/1-709 RHERSLGRAG DDYEVLELDD VPKDNSSGSS PLDQVHSSVP SDPLFEKSEA bmy_12775T0/1-656 RHERSLGRAG DDYEVLELDD VPKENSSGSS PLDQVHSSLP SDPLFEKTEA BACU014954/1-709 RHERSLGRAG DDYEVLELDD VPKENSSGSS PLDQVHSSLP NDPLFEKTEA ENSTTRP00000002743/1-709 RHERSLGRAG DDYEVLELDD VPKENSSGSS PLDQVHSSLP NDPLFEKTEA 101 150 ENSP00000354775/1-708 EIPTCGSALN QTTESSQSFV AVHHSEEGRD TLGSSTNLHN HSEGEYIPGA ENSBTAP00000028884/1-709 EIPICDTALN QTIESTPSFA AVRHSEEGRE PLGSSTDLHS HSEGECTPGV bmy_12775T0/1-656 EIPICDTALN QTIESSPSFA AVHHSEEGRE TLGSSTDLHD HSEGEYTSGV BACU014954/1-709 EIPICDTALN QTIESSPSFA AVHHSEEGRE TLGSSTDLHS HSEGEYTSGV ENSTTRP00000002743/1-709 EIPICDTALN QTIESSPSFA AVHHSEEGRE TLGSSTDLHN HSEGEYTSEV 151 200 ENSP00000354775/1-708 CSASSVQNGI ALVHTDSYDP DGKHGEDNDH LQLSAEVVEG SRYQESLGNT ENSBTAP00000028884/1-709 CNASGVQHGV TLAHTDSYDP DGRHGEDNGH LQLSAGVVEG GSYQAALGDM bmy_12775T0/1-656 CNASSVQNGI TLVHTDSYDP DGRHGEDNDX HQLSADVVEG GRYQEALGNT BACU014954/1-709 CNASSVQNGI TLVHTDSYDP DGRHGEDNDR HRLSADVVEG GRYQEALGNT ENSTTRP00000002743/1-709 CNASSVQNGI TLVHTDSYDP DGRHGEDNDS HQLSADVVEG GRYQEALGNT 201 250 ENSP00000354775/1-708 VFELENREAE AYTGLSPPVP SFNCEVRDEF EELDSVPLVK SSAGDTEFVH ENSBTAP00000028884/1-709 VFELENGEAE AYTGLSPTAP SFNCELRDAF GEVDSAPLVE RSTDNTEFVS bmy_12775T0/1-656 VFELENGEVE AYTGLSPTGP SFNCELRDEF EEVDSAPLVK SSTGDTEFIN BACU014954/1-709 VFELENGEVE AYTGLSPTGP SFNCELRDEF EEVDSAPLVK SSAGDTEFVN ENSTTRP00000002743/1-709 VFELENGEVE AYTGLSPTVP SFNCELRDEF EEVDSAPLVK SSTGDTEFVN 251 300 ENSP00000354775/1-708 QNSQEIQR-S SQDEMVSTKQ QNNTSQERQT EHSPEDAACG PGHICSEQNT ENSBTAP00000028884/1-709 QNNQEFQTSS SEDEVVRKKQ QNNTSQERQR ENSTEDSACA PRHICSEQNT bmy_12775T0/1-656 QNNQEFQRSS SEDEVVRKKQ QNNTSQERQR ENSIEDSACA PRHICSEQNT BACU014954/1-709 QNNQEFQRSS SEDEVVRKKQ QNNTSQERQR ENSVEDSACA PRHICSEQNT ENSTTRP00000002743/1-709 QNNQEFQRSS SEDEVVRKKQ QNNTSQERQR ENSVEDSACA PRHICSEQNT 301 350 ENSP00000354775/1-708 NDREKNHGSS PEQVVRPKVR KLISSSQVDQ ETGFNRHEAK QRSVQRWREA ENSBTAP00000028884/1-709 TDRGKNQGNS LEQVVRPKVR KVISSSQVDP ESGLNRHEAK QRSVQRWREA bmy_12775T0/1-656 SDRGKNQGSS PEQVVRPKVR KLISSSQVDQ ETGFNRHEAK QRSVQRWREA BACU014954/1-709 SDRGKNQGSS PEQVVRPKVR KLISSSQVDQ ETGFNRHEAK QRSVQRWREA ENSTTRP00000002743/1-709 SDRGKNQGSS PEQVVRPKVR KLISSSQVDQ ETGFNRHEAK QRSVQRWREA 351 400 ENSP00000354775/1-708 LEVEESGSDD LLIKCEEYDG EHDCMFLDPP YSRVITQRET ENNQMTSESG ENSBTAP00000028884/1-709 LEVEENGSDD LLIKCDEYDG EHDCMFLDLP FARV-TQRDT EDRQLAAESG bmy_12775T0/1-656 LEVEENGSDD LLIKCDDYDG EHDCMFLDLP FARV-TQRET EDNQITPENG BACU014954/1-709 LEVEENGSDD LLIKCDDYDG EHDCMFLDLP FARV-TQRET ADNQITPEDG ENSTTRP00000002743/1-709 LEVEENGSDD LLIKCDDYDG EHDCMFLDLP FARV-TQRET EDNQITPENG 401 450 ENSP00000354775/1-708 ATAGRQEVDN TFWNGCGDYY QLYDKDEDSS ECSDGEWSAS LPHRFSGTEK ENSBTAP00000028884/1-709 APARQGAVES TFWNGCGDYY QLYDKDEDSS ECSDGEWSAS LPHRFSGTEK bmy_12775T0/1-656 ATGRQEVVDN TFWNGCGDYY QLYDKDEDSS ECSDGEWSAS LPHRFSGTEK BACU014954/1-709 ATGRQEVVDN TFWNGCGDYY QLYDKDEDSS ECSDGEWSAS LPHRFSGTEK ENSTTRP00000002743/1-709 ATGRQEVVDN TFWNGCGDYY QLYDKDEDSS ECSDGEWSAS LPHRFSGTEK 451 500 ENSP00000354775/1-708 DQSSSDESWE TLPGKDENEP ELQSDSSGPE EENQELSLQE GEQTSLEEGE ENSBTAP00000028884/1-709 DQSSSDESWE TLPGKDENEP ELQSDSSGPE EENQELSLQE GEQTSLEEGE bmy_12775T0/1-656 DQSSSDESWE TLPGKDENEP ELQSDSSGPE EENQELSLQE GEQTSLEEGE BACU014954/1-709 DQSSSDESWE TLPGKDENEP ELQSDSSGPE EENQELSLQE GEQTSLEEGE ENSTTRP00000002743/1-709 DQSSSDESWE TLPGKDENEP ELQSDSSGPE EENQELSLQE GEQTSLEEGE 501 550 ENSP00000354775/1-708 IPWLQYNEVN ESSSDEGNEP ANEFAQP-AF MLDGNNNLED DSSVSEDLDV ENSBTAP00000028884/1-709 IPWLQYNEVN ESSSDEGNEP ANEFAQPEAF MLDGNNNLED DSSVSEDLDV bmy_12775T0/1-656 IPWLQYSEVN ESSSDEGNEP ANEFAQPEAF MLDGNNNLED DSSVSEDLDV BACU014954/1-709 IPWLQYNEVN ESSSDEGNEP ANEFAQPEAF MLDGNNNLED DSSVSEDLDV ENSTTRP00000002743/1-709 IPWLQYNEVN ESSSDEGNEP ANEFAQPEAF MLDGNNNLED DSSVSEDLDV 551 600 ENSP00000354775/1-708 DWSLFDGFAD GLGVAEAISY VDPQFLTYMA LEERLAQAME TALAHLESLA ENSBTAP00000028884/1-709 DWSLFDGFAD GLGVAEAISY VDPQFLTYMA LEERLAQAME TALAHLESLA bmy_12775T0/1-656 DWSLFDGFAD GLGVAEAISY VDPQFLTYMA LEERLAQAME TALAHLESLA BACU014954/1-709 DWSLFDGFAD GLGVAEAISY VDPQFLTYMA LEERLAQAME TALAHLESLA ENSTTRP00000002743/1-709 DWSLFDGFAD GLGVAEAISY VDPQFLTYMA LEERLAQAME TALAHLESLA 601 650 ENSP00000354775/1-708 VDVEVANPPA SKESIDGLPE TLVLEDHTAI GQEQCCPICC SEYIKDDIAT ENSBTAP00000028884/1-709 VDVEVANPPA SKESIDGLPE TLVLEDHTAI GQEQCCPICC SEYIKDDIAT bmy_12775T0/1-656 VDVEVANPPA SKESIDGLPE TLVLEDHT-- ---------- ---------- BACU014954/1-709 VDVEVANPPA SKESIDGLPE TLVLEDHTAI GQEQCCPICC SEYIKDDIAT ENSTTRP00000002743/1-709 VDVEVANPPA SKESIDGLPE TLVLEDHTAI GQEQCCPICC SEYIKDDIAT 651 700 ENSP00000354775/1-708 ELPCHHFFHK PCVSIWLQKS GTCPVCRRHF PPAVIEASAA PSSEPDPDAP ENSBTAP00000028884/1-709 ELPCHHFFHK PCVSIWLQKS GTCPVCRRHF PPAVMETPAA ASAEPDRDAP bmy_12775T0/1-656 ---------- ---------- GTCPVCRRHF PPAVMETPAA ASSEPDHDAP BACU014954/1-709 ELPCHHFFHK PCVSIWLQKS GTCPVCRRHF PPAVMETPAA ASSEPDHDAP ENSTTRP00000002743/1-709 ELPCHHFFHK PCVSIWLQKS GTCPVCRRHF PPAVMETPAA ASSEPDHDAP 701 750 ENSP00000354775/1-708 PSNDSIAEAP ENSBTAP00000028884/1-709 PAGDSAAEAP bmy_12775T0/1-656 PANDSTAEAP BACU014954/1-709 PANDSTAEAP ENSTTRP00000002743/1-709 PANDSTAEAP