KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:13 2014 Check: 00 .. Name: ENSTTRP00000011117/1-504 Len: 510 Check: 9266 Weight: 1.00 Name: ENSP00000355518/1-510 Len: 510 Check: 1768 Weight: 1.00 Name: ENSBTAP00000028902/1-510 Len: 510 Check: 2888 Weight: 1.00 Name: bmy_11175T0/1-442 Len: 510 Check: 8519 Weight: 1.00 Name: BACU009606/1-510 Len: 510 Check: 3771 Weight: 1.00 // 1 50 ENSTTRP00000011117/1-504 MDRALRLLAR SRFLSRAPAS APAL-PGPGG AALLLLRPPN VFRMASQNSF ENSP00000355518/1-510 MYRALRLLAR SRPLVRAPAA ALASAPGLGG AAVPSFWPPN AARMASQNSF ENSBTAP00000028902/1-510 MDRALRLLAR SRLLSRNPGS APKPGLGPGG PAVLLLRPPN AARMASQNSF bmy_11175T0/1-442 MDRSLRLLAR SRFLSRAPAS HPSPGPGPAG AAILLLRPRN VVRMASQNSF BACU009606/1-510 MDRSLRLLAR SRFLSRAPAS HPSPGTGPAG AAVLLLRPRN VVRMASQNSF 51 100 ENSTTRP00000011117/1-504 RIEYDTFGEL KVPNDKYYGA QTVRSTMNFK IGGVTERMPI PVIKAFGVLK ENSP00000355518/1-510 RIEYDTFGEL KVPNDKYYGA QTVRSTMNFK IGGVTERMPT PVIKAFGILK ENSBTAP00000028902/1-510 RIEYDTFGEL KVPNDKYYGA QTVRSTMNFK IGGMTERMPI PVIKAFGILK bmy_11175T0/1-442 RIEYDTFGEL KVPNDKYYGA QTVRSTMNFK IGGVTERMPI PVIKAFGILK BACU009606/1-510 RIEYDTFGEL KVPNDKYYGA QTVRSTMNFK IGGVTERMPI PVIKAFGILK 101 150 ENSTTRP00000011117/1-504 RAAAEVNQDY GLDPKIANAI MKAADEVAEG KLNDHFPLVV WQTGSGTQTN ENSP00000355518/1-510 RAAAEVNQDY GLDPKIANAI MKAADEVAEG KLNDHFPLVV WQTGSGTQTN ENSBTAP00000028902/1-510 RAAAEVNQDY GLDPKIANAI MKAADEVAEG KLNDHFPLVV WQTGSGTQTN bmy_11175T0/1-442 RAAAEVNQDY GLDPKIANAI MKAADEVAEG KLNDHFPLVV WQTGSGTQTN BACU009606/1-510 RAAAEVNQDY GLDPKIANAI MKAADEVAEG KLNDHFPLVV WQTGSGTQTN 151 200 ENSTTRP00000011117/1-504 MNVNEVISNR AIEMLGGELG SKKPVHPNDH VNKSQXXXXX XXXXXXXAAA ENSP00000355518/1-510 MNVNEVISNR AIEMLGGELG SKIPVHPNDH VNKSQSSNDT FPTAMHIAAA ENSBTAP00000028902/1-510 MNVNEVISNR AIEILGGELG SKKPVHPNDH VNKSQSSNDT FPTAMHIAAA bmy_11175T0/1-442 MNVNEVISNR AIEMLGGELG SKKPVHPNDH VNKSQSSNDT FPTAMHIAAA BACU009606/1-510 MNVNEVISNR AIEMLGGELG SKKPVHPNDH VNKSQSSNDT FPTAMHIAAA 201 250 ENSTTRP00000011117/1-504 VE-HEVLLR- LQKLHDA-DA KSIE-AQIIK SGRTHTQDAT -LTLGQEFSG ENSP00000355518/1-510 IEVHEVLLPG LQKLHDALDA KSKEFAQIIK IGRTHTQDAV PLTLGQEFSG ENSBTAP00000028902/1-510 IEVHEVLLPG LQKLHDALEA KSKEFDQIIK IGRTHTQDAV PLTLGQEFSG bmy_11175T0/1-442 IEVHEVLLPG LQKLHDALDA KSKEFAQIIK IGRTHTQDAV PLTLGQEFSG BACU009606/1-510 IEVHEVLLPG LQKLHDALDA KSKEFAQIIK IGRTHTQDAV PLTLGQEFSG 251 300 ENSTTRP00000011117/1-504 YVQQVKYATT RIKGAMPRIY ELAAGGTAVG TGLNTRIGFA EKVAAKVAAL ENSP00000355518/1-510 YVQQVKYAMT RIKAAMPRIY ELAAGGTAVG TGLNTRIGFA EKVAAKVAAL ENSBTAP00000028902/1-510 YVQQVKYATT RIKAAMPRIY ELAAGGTAVG TGLNTRIGFA EKVAAKVAVL bmy_11175T0/1-442 YVQQVKYATT RIKGAMPRIY ELAAGGTAVG TGLNTRIGFA EKVAAKVAAL BACU009606/1-510 YVQQVKYATT RIKGAMPRIY ELAAGGTAVG TGLNTRIGFA EEVAAKVAAL 301 350 ENSTTRP00000011117/1-504 TGLPFVTAPN KFEALAAHDA LVELSGAMNT AACSLMKIAN DIRFLGSGPR ENSP00000355518/1-510 TGLPFVTAPN KFEALAAHDA LVELSGAMNT TACSLMKIAN DIRFLGSGPR ENSBTAP00000028902/1-510 TGLPFVTAPN KFEALAAHDA LVELSGAMNT TACSLMKIAN DIRFLGSGPR bmy_11175T0/1-442 T--------- ---------- ---------- ---------- ---------- BACU009606/1-510 TGLPFVTAPN KFEALAAHDA LVELSGAMNT TACSLMKIAN DIRFLGSGPR 351 400 ENSTTRP00000011117/1-504 SGLGELILPE NEPGSSIMPG KVNPTQCEAL TMVAAQVMGN HVAITIGGSS ENSP00000355518/1-510 SGLGELILPE NEPGSSIMPG KVNPTQCEAM TMVAAQVMGN HVAVTVGGSN ENSBTAP00000028902/1-510 SGLGELILPE NEPGSSIMPG KVNPTQCEAM TMVAAQVMGN HVAVTVGGSN bmy_11175T0/1-442 ---------- ---------G KVNPTQCEAV TMVAAQVMGN HVAITIGGSN BACU009606/1-510 SGLGELILPE NEPGSSIMPG KVNPTQCEAV TMVAAQVMGN HVAVTIGGSN 401 450 ENSTTRP00000011117/1-504 GHFELNVFKP LMIKNVLHSA RLLGDASVSF TENCVVGIQA NTERINKLMN ENSP00000355518/1-510 GHFELNVFKP MMIKNVLHSA RLLGDASVSF TENCVVGIQA NTERINKLMN ENSBTAP00000028902/1-510 GHFELNVFKP MMIKNVLHSA RLLGDASVSF TENCVVGIQA NTERISKLMN bmy_11175T0/1-442 GHFELNVFKP LMIKNVLHSA RLLGDASVSF TENCVVGIQA NIERINKLMN BACU009606/1-510 GHFELNVFKP LMIKNVLHSA RLLGDASVSF TENCVVGIQA NTERINKLMN 451 500 ENSTTRP00000011117/1-504 ESLMLVTALN PHIGYDKAAK IAKTAHKTGS TLRATAIELG YLTAEQFDEW ENSP00000355518/1-510 ESLMLVTALN PHIGYDKAAK IAKTAHKNGS TLKETAIELG YLTAEQFDEW ENSBTAP00000028902/1-510 ESLMLVTALN PHIGYDKAAK IAKTAHKNGS TLKATAIELG YLTAEQFDEW bmy_11175T0/1-442 ESLMLVTALN PHIGYDKAAK IAKTAHKNGS TLKATAIELG YLTAEQFDEW BACU009606/1-510 ESLMLVTALN PHIGYDKAAK IAKTAHKNGS TLKATAIELG YLTAEQFDEW 501 550 ENSTTRP00000011117/1-504 VKPKDMLGPK ENSP00000355518/1-510 VKPKDMLGPK ENSBTAP00000028902/1-510 VKPKDMLGPK bmy_11175T0/1-442 VKPKDMLGPK BACU009606/1-510 VKPKDMLGPK