KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:37:13 2014 Check: 00 .. Name: ENSP00000378451/1-790 Len: 840 Check: 1082 Weight: 1.00 Name: bmy_03808T0/1-533 Len: 840 Check: 7664 Weight: 1.00 Name: ENSBTAP00000028903/1-829 Len: 840 Check: 1090 Weight: 1.00 Name: BACU004076/1-831 Len: 840 Check: 3591 Weight: 1.00 Name: ENSTTRP00000015987/1-828 Len: 840 Check: 8346 Weight: 1.00 // 1 50 ENSP00000378451/1-790 ----MEEKRR KYSISSDNSD TTDSHATSTS ASRCSKLPSS TKSGWPRQNE bmy_03808T0/1-533 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028903/1-829 ----MEEKRR KYSISSDNSD TTDSHA--TS ASRCSKLPSS TKSGWPRQNE BACU004076/1-831 MIGEMEEKRR KYSISSDNSD TTDSHA--TS ASRCSKLPSS TKSGWPRQNE ENSTTRP00000015987/1-828 ----MEEKRR KYSISSDNSD TTDSHA--TS ASRCSKLPSS TKSGWPRQNE 51 100 ENSP00000378451/1-790 KKPSEVFRTD LITAMKIPDS YQLSPDDYYI LADPWRQEWE KGVQVPAGAE bmy_03808T0/1-533 ---------- ----MKIPDS YQLSPDDYYI LADPWRQEWE KGVQVPAGAE ENSBTAP00000028903/1-829 KKPSEVFRTD LITAMKIPDS YQLSPDDYYI LADPWRQEWE KGVQVPAGAE BACU004076/1-831 KKPSEVFRTD LITAMKIPDS YQLSPDDYYI LADPWRQEWE KGVQVPAGAE ENSTTRP00000015987/1-828 KKPSEVFRTD LITAMKIPDS YQLSPDDYYI LADPWRQEWE KGVQVPAGAE 101 150 ENSP00000378451/1-790 AIPEPVVRIL PPLEGPPAQA SPSSTMLGEG SQPDWPGGSR YDLDEIDAYW bmy_03808T0/1-533 AIPEPVVRIL PPLEGPPTQV SPSSSELGEG SQPDWPGGSR YDLDEIDAYW ENSBTAP00000028903/1-829 AIPEPVVRIL PPLEGPPTQV SPSGSELGEG SQPDWAGGSR YDLDEIDAYW BACU004076/1-831 AIPEPVVRIL PPLEGPPTQV SPSGSELGEA SQPDWPGGSR YDLDEIDAYW ENSTTRP00000015987/1-828 AIPEPVVRIL PPLEGPPTQV SPSGSDLGEG SQPDWPGGSR YDLDEIDAYW 151 200 ENSP00000378451/1-790 LELINSELKE MERPELDELT LERVLEELET LCHQNMARAI ETQEGLGIEY bmy_03808T0/1-533 LELINSELKE MERPELDELT LERVLEELET LCHQNMARAI ETQEGLGIEY ENSBTAP00000028903/1-829 LELINSELKE MEKPELDELT LERVLEELET LCHQNMARAI ETQEGLGIEY BACU004076/1-831 LELINSELKE MERPELDELT LERVLEELET LCHQNMARAI ETQEGLGIEY ENSTTRP00000015987/1-828 LELINSELRE MERPELDELT LERVLEELET LCHQNMARAI ETQEGLGIEY 201 250 ENSP00000378451/1-790 DEDVVCDVCR SPEGEDGNEM VFCDKCNVCV HQACYGILKV PTGSWLCRTC bmy_03808T0/1-533 DEDVVCDVCR SPEGEDGNEM VFCDKCNVCV HQACYGILKV PTGSWLCRTC ENSBTAP00000028903/1-829 DEDVVCDVCR SPEGEDGNEM VFCDKCNVCV HQACYGILKV PTGSWLCRTC BACU004076/1-831 DEDVVCDVCR SPEGEDGNEM VFCDKCNVCV HQACYGILKV PTGSWLCRTC ENSTTRP00000015987/1-828 DEDVVCDVCR SPEGEDGNEM VFCDKCNVCV HQACYGILKV PTGSWLCRTC 251 300 ENSP00000378451/1-790 ALGVQPKCLL CPKRGGALKP TRSGTKWVHV SCALWIPEVS IGCPEKMEPI bmy_03808T0/1-533 ALGVQPKCLL CPKRGGALKP TRSGTKWVHV SCALWIPEVS IGCPEKMEPI ENSBTAP00000028903/1-829 ALGVQPKCLL CPKRGGALKP TRSGTKWVHV SCALWIPEVS IGCPEKMEPI BACU004076/1-831 ALGVQPKCLL CPKRGGALKP TRSGTKWVHV SCALWIPEVS IGCPEKMEPI ENSTTRP00000015987/1-828 ALGVQPKCLL CPKRGGALKP TRSGTKWVHV SCALWIPEVS IGCPEKMEPI 301 350 ENSP00000378451/1-790 TKISHIPASR WALSCSLCKE CTGTCIQCSM PSCVTAFHVT CAFDHGLEMR bmy_03808T0/1-533 TKISHIPASR WALSCSLCKE CTGTCIQCSM PSCVTAFHVT CAFDHSLEMR ENSBTAP00000028903/1-829 TKISHIPASR WALSCSLCKE CTGTCIQCSM PSCVTAFHVT CAFDHSLEMR BACU004076/1-831 TKISHIPASR WALSCSLCKE CTGTCIQCSM PSCVTAFHVT CAFDHSLEMR ENSTTRP00000015987/1-828 TKISHIPASR WALSCSLCKE CTGTCIQCSM PSCVTAFHVT CAFDHSLEMR 351 400 ENSP00000378451/1-790 TILADNDEVK FKSFCQEHSD GGPRNEPTSE PTEPSQAGED LEKVTLRKQR bmy_03808T0/1-533 TILADNDEVK FKSFCQEHSD GGPRGETTSE PVEPSPASED LEKVTLRKQR ENSBTAP00000028903/1-829 TILADNDEVK FKSFCQEHSD GGPRGEAPSE PVEPSPASED LEKVTLRKQR BACU004076/1-831 TILADNDEVK FKSFCQEHSD GGPRGETTSE PVEPSPASED LEKVTLRKQR ENSTTRP00000015987/1-828 TILADNDEVK FKSFCQEHSD GGPRGETTSE PVEPSPASED LEKVTLRKQR 401 450 ENSP00000378451/1-790 LQQLEEDFYE LVEPAEVAER LDLAEALVDF IYQYWKLKRK ANANQPLLTP bmy_03808T0/1-533 LQQLEEDFYE LVEPAEVAER LDLAEALVDF IYQYWKLKRK ANANQPLLTP ENSBTAP00000028903/1-829 LQQLEEDFYE LVEPAEVAER LDLAEALVDF IYQYWKLKRK ANSNQPLLTP BACU004076/1-831 LQQLEEDFYE LVEPAEVAER LDLAEALVDF IYQYWKLKRK ANANQPLLTP ENSTTRP00000015987/1-828 LQQLEEDFYE LVEPAEVAER LDLAEVLVDF IYQYWKLKRK ANANQPLLTP 451 500 ENSP00000378451/1-790 KTDEVDNLAQ QEQDVLYRRL KLFTHLRQDL ERVRNLCYMV TRRERTKHAI bmy_03808T0/1-533 KTDEVDNLAQ QEQDVLYRRL KLFTHLRQDL ERVRNLCYMV TRRERTKHAI ENSBTAP00000028903/1-829 KTDEVDNLAQ QEQDVLYRRL KLFTHLRQDL ERVRNLCYMV TRRERTKHAI BACU004076/1-831 KTDEVDNLAQ QEQDVLYRRL KLFTHLRQDL ERVRNLCYMV TRRERTKHAI ENSTTRP00000015987/1-828 KTDEVDNLAQ QEQDVLYRRL KLFTHLRQDL ERVRNLCYMV TRRERTKHAI 501 550 ENSP00000378451/1-790 CKLQEQIFHL QMKLIEQDLC R--------- ---------- ---------- bmy_03808T0/1-533 CKLQEQIFHL QMKLIEQDLC R--ERSGRRA KGKKSDSKRK GREGPKGSPE ENSBTAP00000028903/1-829 CKLQEQIFHL QMKLIEQDLC RDAERSGRKT KGKKSDSKRK GREGPKGSPE BACU004076/1-831 CKLQEQIFHL QMKLIEQDLC R--ERSGRRA KGKKSDSKRK GREGPKGSPE ENSTTRP00000015987/1-828 CKLQEQIFHL QMKLIEQDLC R--ERSGRRA KGKKSDSKRK GREGPKGSPE 551 600 ENSP00000378451/1-790 ---------- -------GLS TSFPIDGTFF NSWLAQSVQI TAENMAMSEW bmy_03808T0/1-533 KKEKVKAGSD SVLGQLDG-- ---------- --W------- ---------- ENSBTAP00000028903/1-829 KKEKVKAGSD SVLGQL-GLS TSFPIDGTFF NSWLAQSVQI TAENMAMSEW BACU004076/1-831 KKEKVKAGSD SVLGQL-GLS TSFPIDGTFF NSWLAQSVQI TAENMAMSEW ENSTTRP00000015987/1-828 KKEKVKAGSD SVLGQLAGLS TSFPIDGTFF NSWLAQSVQI TAENMAMSEW 601 650 ENSP00000378451/1-790 PLNNGHREDP APGLLSEELL QDEETLLSFM RDPSLRPGDP ARKARGRTRL bmy_03808T0/1-533 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028903/1-829 SLNNGHREDP APGLLSEELL QDEETLLSFM REPSLRPGDP ARKARGRTRL BACU004076/1-831 SLNNGHREDP APGLLSEELL QDEETLLSFM RDPSLRPGDP ARKARGRTRL ENSTTRP00000015987/1-828 SLNNGHREDP APGLLSEELL QDEETLLSFM RDPSLRPGDP ARKTRGRTRL 651 700 ENSP00000378451/1-790 PAKKKPPPPP PQDGPGSRTT PDKAPKKTWG QDAGSGKGGQ GPPTRKPPRR bmy_03808T0/1-533 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028903/1-829 PAKKK----P PQDGPGSRTT PDKPPKKPWG QDTGSSKGGQ GPPARKPPRR BACU004076/1-831 PAKKK----P PQDGPGSRTT PDKTPKKPWG QDAGSGKGGQ GPPARKPPRR ENSTTRP00000015987/1-828 PAKKK----P PQDGPGSRTT PDKTPKKPWG QDAGSGKGGQ GPPARKPPRR 701 750 ENSP00000378451/1-790 TSSHLPSSPA AGDCPILATP ESPPPLAPET PDEAASVAAD SDVQVPGPAA bmy_03808T0/1-533 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000028903/1-829 TPSHLPSSPT AGDCPIPAAP ESPPPLAPET PEEAAPVAAD SNVQVPGPTA BACU004076/1-831 TPSHLPSSPT AEDCPIPAAP ESPPPLAPET PDEAAPMVAD SNVQVPGPTA ENSTTRP00000015987/1-828 TPSHLPSSPT AEDCPVPAAP ESPPPLAPET PDEAAPMAAD PNVQVPGPAA 751 800 ENSP00000378451/1-790 SPKPLGRLRP PRESKVTRRL PGARPDAGMG PPSAVAERPK VSLHFDTETD bmy_03808T0/1-533 ---------- ---------- --TKQDNSTG SSTE------ ---------- ENSBTAP00000028903/1-829 SPKPLGRLRL PRESKGTRRS PGARPDAGTG PPSAVAERPK VSLHFDTETD BACU004076/1-831 SPKPSGRLRP PRESRGTRRS PSARPDAGTG PPSAVAERPK VSLHFDTETD ENSTTRP00000015987/1-828 SPKPSGRPRP PRESRGTRRS PSARPDAGTG PPSAVAERPK VSLHFDTETD 801 850 ENSP00000378451/1-790 GYFSDGEMSD SDVEAEDGGV QRGPREAGAE EVVRMGVLAS bmy_03808T0/1-533 ---------- ---------- --GKREEGTV ACRGGSERAS ENSBTAP00000028903/1-829 GYFSDGEMSD SDVEAEDSGV QPGPREAGAE EVVRMGVLAS BACU004076/1-831 GYFSDGEMSD SDVEAEDSGV QRGPREAGAE EVVRMGVLAS ENSTTRP00000015987/1-828 GYFSDGEMSD SDVEAEDSGV QRGPREAGAE EVVRMGVLAS